Search results for "Sip"
showing 10 items of 1280 documents
α,β-Dehydroamino acids in naturally occurring peptides
2014
α,β-Dehydroamino acids are naturally occurring non-coded amino acids, found primarily in peptides. The review focuses on the type of α,β-dehydroamino acids, the structure of dehydropeptides, the source of their origin and bioactivity. Dehydropeptides are isolated primarily from bacteria and less often from fungi, marine invertebrates or even higher plants. They reveal mainly antibiotic, antifungal, antitumour, and phytotoxic activity. More than 60 different structures were classified, which often cover broad families of peptides. 37 different structural units containing the α,β-dehydroamino acid residues were shown including various side chains, Z and E isomers, and main modifications: meth…
Dissipation of vibronic energy in a dimer
1992
Abstract The density matrix theory is used for the study of the dissipative quantum dynamics of electron transfer in a dimer. The vibrational modes of the dimer are divided into a single interaction coordinate coupling to the transfered electron and the remaining modes which form a dissipative environment. To correlate the dissipative dynamics with the exact eigenlevels computed for the model system without dissipative environment we analyse the time dependence of the expectation value of the number of vibrational quanta. We analyse the renormalisation of the eigenvalues due to the damping and the relaxation of an excitation into these states.
Electron-transfer dynamics in a donor—acceptor complex
1991
Abstract Density matrix theory is used for the study of the dissipative quantum dynamics of electron transfer in a donor—acceptor complex. The vibrational modes of the complex are divided into a single interaction coordinate coupling to the transferred electron and the remaining modes which form a dissipative environment. With increase of the coupling of the interaction coordinate to the environment and, thus, of the corresponding damping rate of the vibrational quanta, the results of the numerical calculations display a change from the coherent to the incoherent transfer regime. In contrast to the case of small values of the damping, the transfer dynamics become independent of the number o…
Quantum kinetic theory for fermions in temporally varying backrounds
2008
We derive quantum kinetic equations for fermions in a homogeneous time-dependent background in presence of decohering collisions, by use of the Schwinger-Keldysh CTP-formalism. The quantum coherence (between particles and antiparticles) is found to arise from new spectral solutions for the dynamical 2-point correlation function in the mean field limit. The physical density matrix $\rho$ and its dynamics is shown to be necessarily dependent on the extrenous information on the system, and expressions that relate $\rho$ to fundamental coherence functions and fermionic particle and antiparticle numbers are derived. For an interacting system we demonstrate how smooth decoherence effects are indu…
Coherent quasiparticle approximation (cQPA) and nonlocal coherence
2010
We show that the dynamical Wigner functions for noninteracting fermions and bosons can have complex singularity structures with a number of new solutions accompanying the usual mass-shell dispersion relations. These new shell solutions are shown to encode the information of the quantum coherence between particles and antiparticles, left and right moving chiral states and/or between different flavour states. Analogously to the usual derivation of the Boltzmann equation, we impose this extended phase space structure on the full interacting theory. This extension of the quasiparticle approximation gives rise to a self-consistent equation of motion for a density matrix that combines the quantum…
Witnessing non-Markovian effects of quantum processes through Hilbert-Schmidt speed
2020
Non-Markovian effects can speed up the dynamics of quantum systems while the limits of the evolution time can be derived by quantifiers of quantum statistical speed. We introduce a witness for characterizing the non-Markovianity of quantum evolutions through the Hilbert-Schmidt speed (HSS), which is a special type of quantum statistical speed. This witness has the advantage of not requiring diagonalization of evolved density matrix. Its sensitivity is investigated by considering several paradigmatic instances of open quantum systems, such as one qubit subject to phase-covariant noise and Pauli channel, two independent qubits locally interacting with leaky cavities, V-type and $\Lambda $-typ…
Intra- and intermolecular forces dependent main chain conformations of esters of α,β-dehydroamino acids
2013
Abstract Esters of dehydroamino acids occur in nature. To investigate their conformational properties, the low-temperature structures of Ac-ΔAla-OMe, Ac-ΔVal-OMe, Z-(Z)-ΔAbu-OMe, and Z-(Z)-ΔAbu-NHMe were studied by single-crystal X-ray diffraction. The ΔAla ester prefers the fully extended conformation C5. Both the ΔVal and (Z)-ΔAbu esters assume the conformation β, whereas the amide analogue of the latter prefers the conformation α. For the conformations found, DFT calculations using B3LYP/6-311++G(d,p) with the SCRF-PCM and M062X/6-311++G(d,p) with the SCRF-SMD method were applied to mimicking chloroform and water environment. The tendency of the ΔVal and (Z)-ΔAbu esters towards the confo…
SiPM as miniaturised optical biosensor for DNA-microarray applications
2015
A miniaturized optical biosensor for low-level fluorescence emitted by DNA strands labelled with CY5 is showed. Aim of this work is to demonstrate that a Si-based photodetector, having a low noise and a high sensitivity, can replace traditional detection systems in DNA-microarray applications. The photodetector used is a photomultiplier (SiPM), with 25 pixels. It exhibits a higher sensitivity than commercial optical readers and we experimentally found a detection limit for spotted dried samples of ∼1 nM. We measured the fluorescence signal in different operating conditions (angle of analysis, fluorophores concentrations, solution volumes and support). Once fixed the angle of analysis, for s…
Influence of different soluble dietary fibers on the bioaccessibility of the minor Fusarium mycotoxin beauvericin.
2011
Abstract Beauvericin (BEA) is a bioactive compound produced by the secondary metabolism of several Fusarium strains and is known to have various biological activities. This study investigated the bioaccessibility of the BEA tested in concentrations of 5 and 25 mg/L, in a model solution and in wheat crispy breads elaborated with different natural binding compounds as the soluble alimentary dietary fibers β-1,3 glucan, chitosan low molecular weight (L.M.W.), chitosan medium molecular weight (M.M.W.), fructooligosaccharides (FOS), galattomannan, inulin and pectin, added at concentrations of 1% and 5%. The bioaccessibility was determinated by employing a simulated gastrointestinal digestion tha…
Electric and dielectric properties of nanostructured stoichiometric and excess-iron Ni–Zn ferrites
2013
In this paper, we report a study of the effect of excess iron on structural, microstructural, electric and dielectric properties of the nanostructured Ni–Zn ferrites Ni1−xZnxFe2+zO4−δ of different compositions with x = 0, 0.3, 0.5, 0.7, 1 and z = 0, 0.1. The structural and microstructural properties are estimated from x-ray diffraction and atomic force microscopy (AFM) data. The average grain size, evaluated from AFM topographical analysis, is found to be below 70 nm. The samples exhibit low values of dielectric constant and dielectric loss and a high resistivity. Contrary to earlier conclusions regarding microstructured Ni–Zn ferrites, in nanostructured Ni–Zn ferrites sintered at relativel…