Search results for "Specificity."

showing 10 items of 2232 documents

Development and validation of two PCR tests for the detection of and differentiation between Anaplasma ovis and Anaplasma marginale

2012

Anaplasma ovis and Anaplasma marginale are tick-transmitted bacteria that cause anaplasmosis in domestic and wild animals. Recent results show that some domestic and wild animals and ticks are susceptible to both A. ovis and A. marginale, thus supporting the need to differentiate between these species in hosts and ticks diagnosed with Anaplasma infection. However, although anaplasmosis is one of the most common diseases of grazing animals worldwide, rapid and effective tests are not available for the detection of and discrimination between these 2 Anaplasma species. The objective of this research was to develop an easy and reliable method to identify and discriminate between the closely rel…

DNA BacterialVeterinary MedicineAnaplasmosisAnaplasmaSequence analysisMolecular Sequence DataMicrobiologySensitivity and SpecificityBacterial geneticslaw.inventionMajor surface protein 4Bacterial Proteinslawparasitic diseasesAnaplasma Diagnostics major surface protein 4 Polymerase Chain ReactionmedicineAnimalsAnaplasmaPathogenOvisDiagnosticsPolymerase chain reactionDNA PrimersBacteriological TechniquesbiologyAnaplasma ovisAnaplasma ovisSequence Analysis DNAbiology.organism_classificationmedicine.diseaseVirologyPolymerase chain reactionAnaplasma marginaleInfectious DiseasesMolecular Diagnostic TechniquesInsect ScienceParasitologyAnaplasmosis
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Pseudomonas lini sp. nov., a novel species from bulk and rhizospheric soils.

2002

The taxonomic position of eight fluorescent Pseudomonas strains isolated from bulk and rhizospheric soils, and from water was examined. These eight strains clustered in one phenon together with Pseudomomas mandelii (CFBP 4844T), but could still be differentiated from this type strain by four phenotypic features. The eight stains exhibited internal DNA-DNA hybridization values ranging from 60 to 100%, with deltaTm below 5 degrees C (3.9 and 4.3 degrees C) for the lowest values (60 and 66%). The percentages of hybridization with type or reference strains of other Pseudomonas species tested ranged from 12 to 60% (deltaTm = 5.5 degrees C), indicating that the eight isolates studied constituted …

DNA Bacterial[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesMolecular Sequence DataSiderophoresMicrobiologyMicrobiology03 medical and health sciencesSpecies SpecificityPhylogeneticsGenusPseudomonasRNA Ribosomal 16SBotanyPhylogenySoil MicrobiologyComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics030304 developmental biology[SDV.SA] Life Sciences [q-bio]/Agricultural sciences0303 health sciencesPhylogenetic treebiologyStrain (chemistry)030306 microbiologyPseudomonasNucleic Acid HybridizationGeneral MedicineRibosomal RNAbiology.organism_classification16S ribosomal RNAPseudomonas liniWater MicrobiologyInternational Journal of Systematic and Evolutionary Microbiology
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Identification of the mstE Gene Encoding a Glucose-inducible, Low Affinity Glucose Transporter in Aspergillus nidulans

2006

The mstE gene encoding a low affinity glucose transporter active during the germination of Aspergillus nidulans conidia on glucose medium has been identified. mstE expression also occurs in hyphae, is induced in the presence of other repressing carbon sources besides glucose, and is dependent on the function of the transcriptional repressor CreA. The expression of MstE and its subcellular distribution have been studied using a MstE-sGFP fusion protein. Concordant with data on mstE expression, MstE-sGFP is synthesized in the presence of repressing carbon sources, and fluorescence at the periphery of conidia and hyphae is consistent with MstE location in the plasma membrane. Deletion of mstE …

DNA ComplementaryDatabases FactualMonosaccharide Transport ProteinsRecombinant Fusion ProteinsGlucose uptakeGenes FungalGreen Fluorescent ProteinsMolecular Sequence DataHyphaeRepressorBiochemistryAspergillus nidulansSubstrate SpecificityFungal ProteinsCell membraneAspergillus nidulansGene Expression Regulation FungalmedicineAmino Acid SequenceMolecular BiologyGenePhylogenyExpressed Sequence TagsFungal proteinbiologyCell MembranefungiGlucose transporterCell BiologySpores FungalBlotting Northernbiology.organism_classificationFusion proteinRepressor ProteinsKineticsGlucosemedicine.anatomical_structureMicroscopy FluorescenceBiochemistryGene DeletionJournal of Biological Chemistry
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Human fetal adrenal hydroxysteroid sulphotransferase: cDNA cloning, stable expression in V79 cells and functional characterisation of the expressed e…

1995

Dehydroepiandrosterone sulphate (DHEAS) is a major adrenal secretory product, particularly in the fetus where it serves as a substrate for oestrogen biosynthesis by the placenta. The enzyme in the adrenal responsible for synthesising DHEAS, hydroxysteroid sulphotransferase (HST), is therefore essential for human development. We have isolated a full-length cDNA clone, encoding human fetal adrenal HST, and constructed a stable cell line expressing it by transfection into V79 Chinese hamster lung fibroblast cells. This cDNA was essentially identical to that isolated from adult human liver, where the role of HST is less well understood. This recombinant cell line allowed determination of the su…

DNA ComplementaryMolecular Sequence DataGene ExpressionDehydroepiandrosteroneBiologyAndrosteroneTransfectionBiochemistryCell LineSubstrate Specificitychemistry.chemical_compoundCricetulusEndocrinologyCricetinaeComplementary DNAPlacentaAdrenal GlandsmedicineAnimalsHumansAmino Acid SequenceCloning MolecularLungMolecular Biologychemistry.chemical_classificationAndrosteroneBase SequenceSulfatesDehydroepiandrosteroneTransfectionRecombinant ProteinsEnzymemedicine.anatomical_structurechemistryBiochemistryCell culturePregnenolonePregnenoloneSulfotransferaseshormones hormone substitutes and hormone antagonistsmedicine.drugMolecular and Cellular Endocrinology
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Tumor suppression inDrosophila is causally related to the function of thelethal(2)tumorous imaginal discs gene, adnaJ homolog

1995

The Drosophila melanogaster tumor suppressor gene lethal(2)tumorous imaginal discs (l(2)tid) causes in homozygotes malignant growth of cells of the imaginal discs and the death of the mutant larvae at the time of puparium formation. We describe the molecular cloning of the l(2)tid+ gene and its temporal expression pattern in the wild-type and mutant alleles. Germ line rescue of the tumor phenotype was achieved with a 7.0 kb Hindlll-fragment derived from the polytene chromosome band 59F5. The l(2)tid+ gene spans approximately 2.5 kb of genomic DNA. The protein coding region, 1,696 bps long, is divided by an intron into two exons. The predicted Tid56 protein contains 518 amino acids and posse…

DNA ComplementarySaccharomyces cerevisiae ProteinsTumor suppressor geneMolecular Sequence DataMutantGenes InsectSaccharomyces cerevisiaeAnimals Genetically ModifiedFungal ProteinsMitochondrial ProteinsSpecies SpecificityEscherichia coliGeneticsAnimalsDrosophila ProteinsHumansGenes Tumor SuppressorAmino Acid SequenceCloning MolecularGeneAllelesHeat-Shock ProteinsPolytene chromosome bandBase SequenceSequence Homology Amino AcidbiologyEscherichia coli ProteinsPupaChromosome MappingExonsNeoplasms ExperimentalCell BiologyHSP40 Heat-Shock Proteinsbiology.organism_classificationMolecular biologyImaginal discDrosophila melanogasterLarvaDNAJA2Drosophila melanogasterSequence AlignmentDrosophila ProteinDevelopmental BiologyDevelopmental Genetics
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Arbutin synthase, a novel member of the NRD1β glycosyltransferase family, is a unique multifunctional enzyme converting various natural products and …

2002

Plant glucosyltransferases (GTs) play a crucial role in natural product biosynthesis and metabolization of xenobiotics. We expressed the arbutin synthase (AS) cDNA from Rauvolfia serpentina cell suspension cultures in Escherichia coli with a 6 x His tag and purified the active enzyme to homogeneity. The recombinant enzyme had a temperature optimum of 50 degrees C and showed two different pH optima (4.5 and 6.8 or 7.5, depending on the buffer). Out of 74 natural and synthetic phenols and two cinnamyl alcohols tested as substrates for the AS, 45 were accepted, covering a broad range of structural features. Converting rates comparable to hydroquinone were not achieved. In contrast to this broa…

DNA ComplementaryStereochemistryMolecular Sequence DataClinical BiochemistryPharmaceutical ScienceBiochemistryRauwolfiaSubstrate SpecificityXenobioticschemistry.chemical_compoundGlucosyltransferasesBiosynthesisMultienzyme ComplexesDrug DiscoveryGlycosyltransferaseGlycosylAmino Acid SequenceCloning MolecularMolecular BiologyPhylogenychemistry.chemical_classificationBiological ProductsBase SequenceSequence Homology Amino AcidbiologyOrganic ChemistryArbutinArbutinTemperatureGlycosyltransferasesSubstrate (chemistry)Hydrogen-Ion ConcentrationRecombinant ProteinsKineticsEnzymeBiochemistrychemistrybiology.proteinMolecular MedicineGlucosyltransferaseSequence AlignmentBioorganic & Medicinal Chemistry
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Acetyltransfer in natural product biosynthesis--functional cloning and molecular analysis of vinorine synthase.

2004

Vinorine synthase (EC 2.3.1.160) catalyses the acetyl-CoA- or CoA-dependent reversible formation of the alkaloids vinorine (or 11-methoxy-vinorine) and 16-epi-vellosimine (or gardneral). The forward reaction leads to vinorine, which is a direct biosynthetic precursor along the complex pathway to the monoterpenoid indole alkaloid ajmaline, an antiarrhythmic drug from the Indian medicinal plant Rauvolfia serpentina. Based on partial peptide sequences a cDNA clone was isolated and functionally expressed in Escherichia coli. The Km values of the native enzyme for gardneral and acetyl-CoA were determined to be 7.5 and 57 microM. The amino acid sequence of vinorine synthase has highest level of i…

DNA ComplementaryStereochemistrySequence analysisClinical BiochemistryMolecular Sequence DataPharmaceutical ScienceSequence alignmentBiochemistryRauwolfiaIndole AlkaloidsSubstrate Specificitychemistry.chemical_compoundBiosynthesisAcetyltransferasesSequence Analysis ProteinDrug DiscoveryConsensus sequenceAmino Acid SequenceCloning MolecularMolecular BiologyPeptide sequencechemistry.chemical_classificationATP synthasebiologyChemistryOrganic ChemistryAcetylationAmino acidBiochemistryAcetyltransferasebiology.proteinMutagenesis Site-DirectedMolecular MedicineSequence AlignmentBioorganicmedicinal chemistry
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Molecular cloning of rat G-protein-coupled receptor kinase 6 (GRK6) from brain tissue, and its mRNA expression in different brain regions and periphe…

1997

The rat G-protein-coupled receptor kinase 6 (GRK6) cDNA was cloned from rat brain tissue by a combination of reverse-transcription polymerase chain reactions (RT-PCR), based on homology to the cloned human GRK6, and rapid amplification of cDNA ends (RACE-PCR). We obtained a clone of 2817 bp with an open reading frame of 1731 bp encoding for a protein of 576 amino acids that is 96.7% identical and 97.9% similar to its human counterpart. mRNA was detectable in all brain areas examined. In addition, GRK6 was expressed in skeletal muscle, small intestine, aorta, liver, heart, lung, thymus, stomach, uterus and kidney.

DNA ComplementaryTranscription GeneticMolecular Sequence DataProtein Serine-Threonine KinasesMolecular cloningBiologyPolymerase Chain ReactionOpen Reading FramesCellular and Molecular NeuroscienceRapid amplification of cDNA endsGTP-Binding ProteinsComplementary DNAGene expressionAnimalsHumansAmino Acid SequenceRNA MessengerCloning MolecularProtein kinase AMolecular BiologyG protein-coupled receptor kinaseMessenger RNABase SequenceSequence Homology Amino AcidBrainReceptor Protein-Tyrosine KinasesG-Protein-Coupled Receptor KinasesMolecular biologyRatsOpen reading frameOrgan SpecificityFemaleSequence AlignmentMolecular Brain Research
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An AFLP clock for the absolute dating of shallow-time evolutionary history based on the intraspecific divergence of southwestern European alpine plan…

2009

The dating of recent events in the history of organisms needs divergence rates based on molecular fingerprint markers. Here, we used amplified fragment length polymorphisms (AFLPs) of three distantly related alpine plant species co-occurring in the Spanish Sierra Nevada, the Pyrenees and the southwestern Alps/Massif Central to establish divergence rates. Within each of these species (Gentiana alpina, Kernera saxatilis and Silene rupestris), we found that the degree of AFLP divergence (D(N72)) between mountain phylogroups was significantly correlated with their time of divergence (as inferred from palaeoclimatic/palynological data), indicating constant AFLP divergence rates. As these rates d…

DNA PlantAlpine plantPopulationCaryophyllaceaeIntraspecific competitionDivergenceEvolution MolecularSpecies SpecificityGeneticsVicarianceGentianaAmplified Fragment Length Polymorphism AnalysiseducationEcology Evolution Behavior and SystematicsEcosystemPhylogenyeducation.field_of_studybiologyModels GeneticEcologySequence Analysis DNAPlantsbiology.organism_classificationSilene rupestrisEuropeGenetics PopulationMinuartiaBrassicaceaeMutationRegression AnalysisAmplified fragment length polymorphismMolecular ecology
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Partitioning study of polycyclic aromatic hydrocarbons between water and some selected water-insoluble phases

2007

An investigation on the partitioning of naphthalene and phenanthrene between water and some water-insoluble phases has been carried out by Uv-vis-NIR spectrophotometry. The analysis of the experimental results emphasized the role of intermolecular interactions and structural features of the hosting phases as driving forces of the partitioning of these polycyclic aromatic hydrocarbons. The critical comparison of the resulting distribution constants allowed to evaluate the potentials of some extracting phases to set up sensitive analytical methods and/or effective environment remediation technologies.

DNA-ADDUCTSEXTRACTIONSpectroscopy Near-Infraredmedicine.diagnostic_testEnvironmental remediationChemistryMUTATIONSIntermolecular forcetechnology industry and agricultureWaterWater insolublePhenanthreneSensitivity and SpecificityAnalytical Chemistrychemistry.chemical_compoundSolubilityEnvironmental chemistrySpectrophotometrySOLUBILIZATIONmedicinePolycyclic CompoundsSpectrophotometry UltravioletGeneral Environmental ScienceNaphthalene
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