Search results for "Symbiotic"

showing 10 items of 64 documents

Evolution and comparative genomics of di-symbiotic systems in aphids from the Lachninae subfamily and genome reduction in Serratia symbiotica

2016

Ph.D. thesis presented by Alejandro Manzano Marín Director: Prof. Dr. Amparo Latorre Castillo Institution: Universiat de València

:CIENCIAS DE LA VIDA::Simbiosis [UNESCO]BuchneraUNESCO::CIENCIAS DE LA VIDA::SimbiosisUNESCO::CIENCIAS DE LA VIDA::Microbiología ::Metabolismo bacterianoUNESCO::CIENCIAS DE LA VIDAcomparative genomicsgenome reduction:CIENCIAS DE LA VIDA::Microbiología ::Metabolismo bacteriano [UNESCO]symbiosisserratia symbiotica:CIENCIAS DE LA VIDA [UNESCO]
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Host-based divergence in populations of the pea aphid: insights from nuclear markers and the prevalence of facultative symbionts.

2003

In North America, the pea aphid Acyrthosiphon pisum encompasses ecologically and genetically distinct host races that offer an ideal biological system for studies on sympatric speciation. In addition to its obligate symbiont Buchnera, pea aphids harbour several facultative and phylogenetically distant symbionts. We explored the relationships between host races of A. pisum and their symbiotic microbiota to gain insights into the historical process of ecological specialization and symbiotic acquisition in this aphid. We used allozyme and microsatellite markers to analyse the extent of genetic differentiation between populations of A. pisum on pea, alfalfa and clover in France. In parallel, we…

Adaptation BiologicalHamiltonella defensaGeneral Biochemistry Genetics and Molecular BiologyBuchneraGene FrequencyAnimalsSelection GeneticSymbiosisEcosystemPhylogenyGeneral Environmental ScienceDNA PrimersFacultativeAphidGeneral Immunology and MicrobiologybiologyHost (biology)Ecologyfood and beveragesFabaceaeGeneral MedicineSequence Analysis DNAbiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumSympatric speciationEvolutionary biologyAphidsFranceGeneral Agricultural and Biological SciencesBuchneraSymbiotic bacteriaMicrosatellite RepeatsResearch ArticleProceedings. Biological sciences
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A randomised clinical trial (RCT) of a symbiotic mixture in patients with irritable bowel syndrome (IBS): effects on symptoms, colonic transit and qu…

2012

Purpose The aim of this study is to test in a double-blinded, randomised placebo-controlled study the effects of a commercially available multi-strain symbiotic mixture on symptoms, colonic transit and quality of life in irritable bowel syndrome (IBS) patients who meet Rome III criteria. Background There is only one other double-blinded RCT on a single-strain symbiotic mixture in IBS. Methods This is a double-blinded, randomised placebo-controlled study of a symbiotic mixture (Probinul, 5 g bid) over 4 weeks after 2 weeks of run-in. The primary endpoints were global satisfactory relief of abdominal flatulence and bloating. Responders were patients who reported at least 50 % of the weeks of …

AdultMalemedicine.medical_specialtyAbdominal painPrebioticSymbioticProbioticGastroenterologyRandomised clinical trialMedication Adherencelaw.inventionIrritable Bowel SyndromeBloatingQuality of lifeRandomized controlled triallawInternal medicinemedicineFlatulenceHumansGastrointestinal TransitSymbiosisIrritable bowel syndromeDemographyPain Measurementbusiness.industryBloatingProbioticsdigestive oral and skin physiologyGastroenterologyHepatologymedicine.diseasedigestive system diseasesAbdominal PainDietClinical trialQuality of LifeOriginal ArticleFemalemedicine.symptombusinessFlatulenceInternational Journal of Colorectal Disease
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Gènes fongiques liés au calcium impliqués dans la mycorhize à arbuscules

2012

Fluctuations in intracellular (Ca2+) calcium levels generate signaling events and regulate different cellular processes. Whilst the implication of Ca2+ in plant cell responses during arbuscular mycorrhiza (AM) interactions is well documented, nothing is known about the regulation or role of this secondary meesenger in the fungal symbiont. The molecular basis of fungal calcium homeostasis in the AM symbiosis was analyzed by investigating the expression of Ca2+-related fungal genes. In a first study, G. mosseae genes putatively encoding a MAP3k-like protein kinase (Gm2) and a P-type ATPase (Gm152) were investigated. Both Ca2+-related genes were up-regulated by A. sinicum root exudates, sugges…

Cell signalingGlomus mosseaeHoméostase calcique[SDV]Life Sciences [q-bio]Protéines membranaires/nucléairesCa2+ homeostasiscalcium;gene;fungal;arbuscular mycorrhiza[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyChampignons mycorhizogènesGènes liés au Ca2+thesegeneMembrane/nuclear proteinsMycorrhizal fungi[SDV.SA] Life Sciences [q-bio]/Agricultural sciencescalciumarbuscular mycorrhizaCa2+-related genesTempo-spatial expressionInteractions symbiotiquesSignalisation cellulairefungal[SDE]Environmental SciencesGlomus intraradicesSymbiotic interactionsExpression tempo-spatiale
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Evolution of the leucine gene cluster in Buchnera aphidicola: insights from chromosomal versions of the cluster.

2004

ABSTRACT In Buchnera aphidicola strains associated with the aphid subfamilies Thelaxinae, Lachninae, Pterocommatinae, and Aphidinae, the four leucine genes ( leuA , - B , - C , and - D ) are located on a plasmid. However, these genes are located on the main chromosome in B. aphidicola strains associated with the subfamilies Pemphiginae and Chaitophorinae. The sequence of the chromosomal fragment containing the leucine cluster and flanking genes has different positions in the chromosome in B. aphidicola strains associated with three tribes of the subfamily Pemphiginae and one tribe of the subfamily Chaitophorinae. Due to the extreme gene order conservation of the B. aphidicola genomes, the v…

ChaitophorinaeSubfamilygenome sequenceGenetics and Molecular BiologyMicrobiologyGenomemolecular characterizationsymbiotic bacteriaPlasmidschizaphis-graminumBuchneraLeucinemitochondrial-dnaplasmidGene clusterMolecular BiologyGeneHeat-Shock ProteinsPhylogenyGeneticsRecombination GeneticBinding SitesbiologyEscherichia coli ProteinsChromosomeChromosomes Bacterialbiology.organism_classificationPRI Bioscienceaphidsendosymbiotic bacteriaMultigene Familyescherichia-coliBuchneraanthranilate synthase trpegPlasmidsJournal of bacteriology
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Bacterial endosymbionts of insects: insights from comparative genomics.

2004

The development of molecular techniques for the study of uncultured bacteria allowed the extensive study of the widespread association between insects and intracellular symbiotic bacteria. Most of the bacterial endosymbionts involved in such associations are gamma-proteobacteria, closely related to Escherichia coli. In recent years, five genomes from insect endosymbionts have been sequenced, allowing the performance of extensive genome comparative analysis that, as a complement of phylogenetic studies, and analysis on individual genes, can help to understand the different traits of this particular association, including how the symbiotic process is established, the explanation of the specia…

Comparative genomicsInsectaBacteriaEcologyfungiAdaptation BiologicalBacterial Physiological PhenomenaBiologymedicine.disease_causeBacterial Physiological PhenomenaMicrobiologyGenomeBiological EvolutionSymbiosisEvolutionary biologymedicinebacteriaAnimalsAdaptationSymbiosisEscherichia coliGeneEcology Evolution Behavior and SystematicsGenome BacterialSymbiotic bacteriaEnvironmental microbiology
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Diversity of rhizobia nodulating wild shrubs of Sicily and some neighbouring islands

2008

Abstract Legume shrubs have great potential for rehabilitation of semi-arid degraded soils in Mediterranean ecosystems as they establish mutualistic symbiosis with Nfxing rhizobia. Eighty-eight symbiotic rhizobia were isolated from seven wild legume shrubs native of Sicily (Southern Italy) and grouped in operational taxonomic units (OTU) by analysis of the ribosomal internal transcribed spacer (ITS) polymorphism. Partial sequencing of 16S rRNA gene of representative isolates of each OTU revealed that most Genisteae symbionts are related to Bradyrhizobium canariense, B. japonicum and B. elkanii. Teline monspessulana was the only Genistea nodulated by Mesorhizobium strains, and Anagyris foeti…

DNA BacterialGenotypeRhizobium · Bradyrhizobium · 16SrDNA · Symbiotic genes · Mediterranean wild legumes · Genisteae · Thermopsideae · Soil rehabilitation · Nodule occupancyMolecular Sequence DataGenisteaeSettore BIO/19 - Microbiologia GeneraleSoil rehabilitationSymbiotic geneDNA RibosomalPlant RootsBiochemistryMicrobiologyBradyrhizobiumRhizobiaBacterial ProteinsSymbiosisRhizobiaceaeRNA Ribosomal 16SDNA Ribosomal SpacerBotanyGeneticsCluster AnalysisBradyrhizobiaceaeBiomassBradyrhizobiumInternal transcribed spacerSicilyMolecular BiologyPhylogenyPolymorphism Geneticbiology16SrDNAMesorhizobiumfood and beveragesFabaceaeBiodiversitySequence Analysis DNAGeneral Medicinebiology.organism_classificationGenisteaeDNA FingerprintingNodule occupancyThermopsideaeRhizobiumMediterranean wild legumeAcyltransferasesRhizobium
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Use of nodulation pattern, stress tolerance, nodC gene amplification, RAPD-PCR and RFLP-16S rDNA analysis to discriminate genotypes of Rhizobium legu…

2005

Twenty-seven new Rhizobium isolates were obtained from root nodules of wild and crop legumes belonging to the genera Vicia, Lathyrus and Pisum from different agroecological areas in central and southern Italy. A polyphasic approach including phenotypic and genotypic techniques was used to study their diversity and their relationships with other biovars and species of rhizobia. Analysis of symbiotic properties and stress tolerance tests revealed that wild isolates, showed a wide spectrum of nodulation and a marked variation in stress tolerance compared with reference strains tested in this study. All rhizobial isolates (except for the isolate CG4 from Galega officinalis) were presumptively i…

DNA BacterialRoot noduleGenotypeStress toleranceBiologymedicine.disease_causeN-AcetylglucosaminyltransferasesApplied Microbiology and BiotechnologyMicrobiologyDNA RibosomalPolymerase Chain ReactionMediterranean areaRhizobium leguminosarumRhizobiaBacterial ProteinsRhizobium leguninosarumNodC geneStress toleranceWild legumesStrains diversityMediterranean areaSymbiotic characteristicsRNA Ribosomal 16SmedicineSymbiosisEcology Evolution Behavior and SystematicsGeneticsPrincipal Component AnalysisRhizobium leguminosarumfood and beveragesFabaceaeNucleic acid amplification techniqueNodC geneHydrogen-Ion ConcentrationRhizobium leguninosarum16S ribosomal RNAbiology.organism_classificationStrains diversitySymbiotic characteristicsRAPDBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueRhizobiumWild legumeRestriction fragment length polymorphismNucleic Acid Amplification TechniquesPolymorphism Restriction Fragment LengthSettore AGR/16 - Microbiologia Agraria
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Molecular characterization of the leucine cluster in Buchnera PSY, primary endosymbiont of the aphid Pemphigus spyrothecae

2002

ABSTRACT Buchnera strains from most aphid subfamilies studied to date have been found to carry the leucine gene cluster ( leuA , - B , - C , and - D ) on a plasmid, an organization unique among bacteria. Here, however, we demonstrate a classical chromosomal location of the cluster in Buchnera sp. strain PSY from the aphid Pemphigus spyrothecae (subfamily Pemphiginae). The genes that flank leuABCD in Buchnera sp. strain PSY appear to be adjacent in the genome of Buchnera sp. strain APS, a strain carrying a leucine plasmid. We propose that the presence of a leucine plasmid predates the diversification of symbiotic Buchnera and that the chromosomal location observed in Buchnera sp. strain PSY …

DNA BacterialSubfamilyMolecular Sequence DataPemphigus spyrothecaeApplied Microbiology and Biotechnologysymbiotic bacteriaPlasmidBacterial ProteinsBuchneraLeucineplasmidGene clusterevolutionInvertebrate MicrobiologyAnimalsgeneticsCloning MolecularSymbiosisGeneHydro-LyasesGeneticsBase SequenceEcologybiologyStrain (chemistry)Gene Amplificationbiochemical phenomena metabolism and nutritionbiology.organism_classificationPRI BioscienceMultigene FamilyLeucinebiosynthesisBuchneraPemphigusFood ScienceBiotechnologyanthranilate synthase trpegApplied and Environmental Microbiology
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Symbionts and Pathogens: What is the Difference?

2011

The ecological relationships that organisms establish with others can be considered as broad and diverse as the forms of life that inhabit and interact in our planet. Those interactions can be considered as a continuum spectrum, ranging from beneficial to detrimental outcomes. However, this picture has revealed as more complex and dynamic than previously thought, involving not only factors that affect the two or more members that interact, but also external forces, with chance playing a crucial role in this interplay. Thus, defining a particular symbiont as mutualist or pathogen in an exclusive way, based on simple rules of classification is increasingly challenging if not unfeasible, since…

Ecological relationshipEcologyEvolutionary biologyEndosymbiotic bacteriumBiology
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