Search results for "TRANSCRIPTION"

showing 10 items of 2278 documents

Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance.

2000

AbstractPosttranscriptional gene silencing (PTGS) in plants results from the degradation of mRNAs and shows phenomenological similarities with quelling in fungi and RNAi in animals. Here, we report the isolation of sgs2 and sgs3 Arabidopsis mutants impaired in PTGS. We establish a mechanistic link between PTGS, quelling, and RNAi since the Arabidopsis SGS2 protein is similar to an RNA-dependent RNA polymerase like N. crassa QDE-1, controlling quelling, and C. elegans EGO-1, controlling RNAi. In contrast, SGS3 shows no significant similarity with any known or putative protein, thus defining a specific step of PTGS in plants. Both sgs2 and sgs3 mutants show enhanced susceptibility to virus, d…

0106 biological sciencesRNA-induced transcriptional silencingDNA PlantRNA-induced silencing complexTrans-acting siRNAMolecular Sequence DataPotyvirusArabidopsisRNA-dependent RNA polymerase[SDV.BC]Life Sciences [q-bio]/Cellular BiologyGenes Plant01 natural sciencesCucumovirusGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesSolanum lycopersicumRNA interferenceArabidopsisGene expressionGene silencingAmino Acid SequenceGene SilencingCloning MolecularRNA Processing Post-Transcriptional[SDV.BC] Life Sciences [q-bio]/Cellular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant DiseasesPlant ProteinsGenetics0303 health sciencesbiologyBase SequenceBiochemistry Genetics and Molecular Biology(all)Arabidopsis ProteinsfungiTobamovirusChromosome MappingGENETIQUEbiology.organism_classificationRNA-Dependent RNA PolymeraseMutagenesis010606 plant biology & botanyCell
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Transcriptional responses of Medicago truncatula upon sulfur deficiency stress and arbuscular mycorrhizal symbiosis

2014

International audience; Sulfur plays an essential role in plants' growth and development and in their response to various abiotic and biotic stresses despite its leachability and its very low abundance in the only form that plant roots can uptake (sulfate). It is part of amino acids, glutathione (GSH), thiols of proteins and peptides, membrane sulfolipids, cell walls and secondary products, so reduced availability can drastically alter plant growth and development. The nutritional benefits of symbiotic interactions can help the plant in case of S deficiency. In particular the arbuscular mycorrhizal (AM) interaction improves N, P and S plant nutrition, but the mechanisms behind these exchang…

0106 biological sciencesRhizophagus irregularisS deficiencyTranscription Genetic[SDV]Life Sciences [q-bio]FungusPlant Sciencelcsh:Plant culture01 natural sciencesAM interactionrhizophagus irregularissulfur deficiencyTranscriptomeCell wall03 medical and health sciencesBotanymedicago truncatula;transcriptome;S deficiency;AM interaction;rhizophagus irregularis[SDV.BV]Life Sciences [q-bio]/Vegetal Biologylcsh:SB1-1110Original Research ArticleGene030304 developmental biology2. Zero hungerAbiotic component0303 health sciencescarencebiologyarbuscular mycorrhizafungifood and beveragesmedicago truncatulabiology.organism_classificationMedicago truncatulaArbuscular Mycorrhizal Symbiosis[SDE]Environmental SciencesPlant nutritionnutrition soufréetranscriptome010606 plant biology & botany
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Transcription of two blue copper-binding protein isogenes is highly correlated with arbuscular mycorrhizal development in Medicago truncatula.

2010

International audience; Expression profiling of two paralogous arbuscular mycorrhizal (AM)-specific blue copper-binding gene (MtBcp1a and MtBcp1b) isoforms was performed by real-time quantitative polymerase chain reaction in wild-type Medicago truncatula Jemalong 5 (J5) during the mycorrhizal development with Glomus intraradices for up to 7 weeks. Time-course analysis in J5 showed that expression of both MtBcp1 genes increased continuously and correlated strongly with the colonization intensity and arbuscule content. MtPT4, selected as a reference gene of the functional plant-fungus association, showed a weaker correlation to mycorrhizal development. In a second experiment, a range of mycor…

0106 biological sciencesTranscription GeneticPhysiologyGLOMUS INTRARADICESMutantMolecular Sequence Data01 natural sciences03 medical and health sciencesTranscription (biology)Gene Expression Regulation PlantBLUE COPPER-BINDINGMYCRORHIZE ARBUSCULAIREMycorrhizaeGene expressionBotanyMedicago truncatulaProtein Isoforms[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyRELATION PLANTE-MICROORGANISMEMycorrhizaGenePhylogeny030304 developmental biologyPlant Proteins2. Zero hunger0303 health sciencesbiologyfungiGeneral Medicinebiology.organism_classificationMolecular biologyMedicago truncatulaGene expression profilingReal-time polymerase chain reactionCarrier ProteinsAgronomy and Crop Science010606 plant biology & botanyMolecular plant-microbe interactions : MPMI
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Real-time reverse transcription polymerase chain reaction development for rapid detection of Tomato brown rugose fruit virus and comparison with othe…

2019

Background Tomato brown rugose fruit virus (ToBRFV) is a highly infectious tobamovirus that causes severe disease in tomato (Solanum lycopersicum L.) crops. In Italy, the first ToBRFV outbreak occurred in 2018 in several provinces of the Sicily region. ToBRFV outbreak represents a serious threat for tomato crops in Italy and the Mediterranean Basin. Methods Molecular and biological characterisation of the Sicilian ToBRFV ToB-SIC01/19 isolate was performed, and a sensitive and specific Real-time RT-PCR TaqMan minor groove binder probe method was developed to detect ToBRFV in infected plants and seeds. Moreover, four different sample preparation procedures (immunocapture, total RNA extractio…

0106 biological sciencesVeterinary medicinelcsh:MedicineFast detectionMicrobiology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyConserved sequence03 medical and health sciencesVirologyTaqManPRODUCCION VEGETALAgricultural Science030304 developmental biology2. Zero hunger0303 health sciencesbiologyInoculationRT-qPRCGeneral Neurosciencelcsh:ROutbreakSettore AGR/12 - Patologia Vegetalefood and beveragesTobamovirusGeneral Medicinebiology.organism_classificationToBRFV3. Good healthReverse transcription polymerase chain reactionPrimer (molecular biology)SolanumGeneral Agricultural and Biological Sciences010606 plant biology & botanyPeerJ
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RCD1 Coordinates Chloroplastic and Mitochondrial Electron Transfer through Interaction with ANAC Transcription Factors in Arabidopsis

2018

AbstractSignaling from chloroplasts and mitochondria, both dependent on reactive oxygen species (ROS), merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). ROS produced in the chloroplasts affect the abundance, thiol redox state and oligomerization of RCD1. RCD1 directly interactsin vivowith ANAC013 and ANAC017 transcription factors, which are the mediators of the ROS-related mitochondrial complex III retrograde signa and suppresses activity of ANAC013 and ANAC017. Inactivation ofRCD1leads to increased expression of ANAC013 and ANAC017-regulated genes belonging to the mitochondrial dysfunction stimulon (MDS), including genes for mitochondrial alternative oxidases(AOXs).Accumulat…

0106 biological scienceschemistry.chemical_classification0303 health sciencesReactive oxygen speciesNuclear genebiologyfood and beveragesMitochondrionbiology.organism_classification01 natural sciencesCell biologyChloroplast03 medical and health scienceschemistryArabidopsisRetrograde signalingNuclear proteinTranscription factor030304 developmental biology010606 plant biology & botany
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Nitric Oxide Signalling in Plants: Cross-Talk With Ca2+, Protein Kinases and Reactive Oxygen Species

2010

International audience; Nitric oxide (NO) is a gaseous free radical recognized as a ubiquitous signal transducer that contributes to various biological processes in animals. It exerts most of its effects by regulating the activities of various proteins including Ca2+ channels, protein kinases and transcription factors. In plants, studies conducted over the past ten years revealed that NO also functions as an endogenous mediator in diverse physiological processes ranging from root development to stomatal closure. Its biological role as an intracellular plant messenger molecule, however, remains poorly understood. Here, we review the molecular basis of NO signaling in animals and discuss curr…

0106 biological scienceschemistry.chemical_classification[ SDV.BV ] Life Sciences [q-bio]/Vegetal Biology0303 health sciencesProgrammed cell deathReactive oxygen speciesKinaseEndogenous mediator01 natural sciencesNitric oxideCell biology03 medical and health scienceschemistry.chemical_compoundchemistry[SDV.BV]Life Sciences [q-bio]/Vegetal BiologySignal transductionTranscription factorIntracellular030304 developmental biology010606 plant biology & botany
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Modulation of copper deficiency responses by diurnal and circadian rhythms in Arabidopsis thaliana

2015

Highlight Cyclic expression of copper transport and the responses to copper deficiency are integrated into the light and circadian–oscillator signalling in plants.

0106 biological sciencescopper deficiencyArabidopsis thalianaPhysiologyPeriod (gene)Circadian clockArabidopsischemistry.chemical_elementPlant Science01 natural sciencesdiurnal rhythm03 medical and health sciencesGene Expression Regulation Plantcircadian clockmedicineArabidopsis thalianaHomeostasisCircadian rhythmSLC31 Proteinsheavy metalsTranscription factorCation Transport Proteins030304 developmental biologyGeneticsheavy metals.0303 health sciencesbiologyArabidopsis ProteinsSuperoxide DismutaseGiganteafood and beveragesbiology.organism_classificationmedicine.diseasePlants Genetically ModifiedCopperCell biologyCircadian RhythmDNA-Binding Proteinschemistrycopper transportCopper deficiencyCopper010606 plant biology & botanyResearch PaperTranscription Factors
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Cellular Concentrations of the Transporters DctA and DcuB and the Sensor DcuS of Escherichia coli and the Contributions of Free and Complexed DcuS to…

2017

ABSTRACT In Escherichia coli , the catabolism of C 4 -dicarboxylates is regulated by the DcuS-DcuR two-component system. The functional state of the sensor kinase DcuS is controlled by C 4 -dicarboxylates (like fumarate) and complexation with the C 4 -dicarboxylate transporters DctA and DcuB, respectively. Free DcuS (DcuS F ) is known to be constantly active even in the absence of fumarate, whereas the DcuB-DcuS and DctA-DcuS complexes require fumarate for activation. To elucidate the impact of the transporters on the functional state of DcuS and the concentrations of DcuS F and DcuB-DcuS (or DctA-DcuS), the absolute levels of DcuS, DcuB, and DctA were determined in aerobically or anaerobic…

0301 basic medicine030106 microbiologyBiologymedicine.disease_causeMicrobiologyDNA-binding proteinMass Spectrometry03 medical and health sciencesFumaratesTranscriptional regulationmedicineEscherichia coliDicarboxylic AcidsAnaerobiosisPhosphorylationMolecular BiologyTranscription factorEscherichia coliDicarboxylic Acid TransportersCatabolismKinaseEscherichia coli ProteinsAutophosphorylationGene Expression Regulation BacterialAerobiosisDNA-Binding Proteins030104 developmental biologyBiochemistryPhosphorylationProtein KinasesSignal TransductionTranscription FactorsResearch ArticleJournal of bacteriology
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Injury-activated glial cells promote wound healing of the adult skin in mice

2018

Cutaneous wound healing is a complex process that aims to re-establish the original structure of the skin and its functions. Among other disorders, peripheral neuropathies are known to severely impair wound healing capabilities of the skin, revealing the importance of skin innervation for proper repair. Here, we report that peripheral glia are crucially involved in this process. Using a mouse model of wound healing, combined with in vivo fate mapping, we show that injury activates peripheral glia by promoting de-differentiation, cell-cycle re-entry and dissemination of the cells into the wound bed. Moreover, injury-activated glia upregulate the expression of many secreted factors previously…

0301 basic medicine10017 Institute of AnatomyGeneral Physics and AstronomyTransforming Growth Factor betaMedicinelcsh:ScienceMyofibroblastsCells CulturedSkinMice KnockoutMultidisciplinaryintegumentary systemSOXE Transcription FactorsQCell CycleCell Differentiation3100 General Physics and AstronomyCell biologyMice Inbred DBACutaneous woundMyofibroblastNeurogliaSignal TransductionMice 129 StrainScienceMice Transgenic610 Medicine & health1600 General ChemistryGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesParacrine signallingDownregulation and upregulationIn vivoFate mapping1300 General Biochemistry Genetics and Molecular BiologyAnimalsHumansEpithelial proliferationWound Healingbusiness.industryGene Expression ProfilingGeneral ChemistryMice Inbred C57BL030104 developmental biology10032 Clinic for Oncology and Hematology570 Life sciences; biologylcsh:QWound healingbusiness
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Functions of histone modifications and histone modifiers in Schwann cells.

2019

Schwann cells (SCs) are the main glial cells present in the peripheral nervous system (PNS). Their primary functions are to insulate peripheral axons to protect them from the environment and to enable fast conduction of electric signals along big caliber axons by enwrapping them in a thick myelin sheath rich in lipids. In addition, SCs have the peculiar ability to foster axonal regrowth after a lesion by demyelinating and converting into repair cells that secrete neurotrophic factors and guide axons back to their former target to finally remyelinate regenerated axons. The different steps of SC development and their role in the maintenance of PNS integrity and regeneration after lesion are c…

0301 basic medicine570 Life sciencesLesionHistones03 medical and health sciencesCellular and Molecular Neuroscience0302 clinical medicineNeurotrophic factorsPeripheral Nerve InjuriesmedicineAnimalsHumansSecretionTranscription factorMyelin SheathbiologyRegeneration (biology)AxonsCell biologyNerve Regeneration030104 developmental biologyHistonemedicine.anatomical_structurenervous systemNeurologyMyelin sheathPeripheral nervous systembiology.proteinSchwann Cellsmedicine.symptom030217 neurology & neurosurgery570 BiowissenschaftenGliaREFERENCES
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