Search results for "YEAST"

showing 10 items of 792 documents

Segmental duplication associated with evolutionary instability of human chromosome 3p25.1

2005

Fluorescence in situ hybridization (FISH) of human bacterial artificial chromosome (BAC) clones to orangutan metaphase spreads localized a breakpoint between human chromosome 3p25.1 and orangutan chromosome 2 to a <30-kb interval. The inversion occurred in a relatively gene-rich region with seven genes within 500 kb. The underlying breakpoint is closely juxtaposed to validated genes, however no functional gene has been disrupted by the evolutionary rearrangement. An approximately 21-kb DNA segment at the 3p25.1 breakpoint region has been duplicated intrachromosomally and interchromosomally to multiple regions in the orangutan and human genomes, providing additional evidence for the role …

BiologyEvolution MolecularChromosomal InstabilityGene DuplicationYeastsChromosome regionsGeneticsmedicineAnimalsHumansMolecular BiologyIn Situ Hybridization FluorescencePhylogenyGenetics (clinical)Segmental duplicationGeneticsBacterial artificial chromosomeGorilla gorillamedicine.diagnostic_testChromosome MappingKaryotypeChromosome 17 (human)KaryotypingChromosomes Human Pair 3Chromosome 21Chromosome 22Fluorescence in situ hybridizationCytogenetic and Genome Research
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Saccharomyces eubayanusandSaccharomyces uvarumassociated with the fermentation ofAraucaria araucanaseeds in Patagonia

2014

Mudai is a traditional fermented beverage, made from the seeds of the Araucaria araucana tree by Mapuche communities. The main goal of the present study was to identify and characterize the yeast microbiota responsible of Mudai fermentation as well as from A. araucana seeds and bark from different locations in Northern Patagonia. Only Hanseniaspora uvarum and a commercial bakery strain of Saccharomyces cerevisiae were isolated from Mudai and all Saccharomyces isolates recovered from A. araucana seed and bark samples belonged to the cryotolerant species Saccharomyces eubayanus and Saccharomyces uvarum. These two species were already reported in Nothofagus trees from Patagonia; however, this …

Biotecnología AgropecuariaMolecular Sequence DataArgentinaSaccharomyces bayanusSACCHAROMYCES BAYANUSDNA MitochondrialApplied Microbiology and BiotechnologyMicrobiologySaccharomycesSaccharomycesHYBRIDSBotanyChileDNA FungalPhylogenyHybridNothofagusGeographybiologySaccharomyces eubayanus//purl.org/becyt/ford/4.4 [https]General MedicineAraucaria araucanabiology.organism_classificationCRYOTOLERANT YEASTYeastCIENCIAS AGRÍCOLASvisual_artFermentationSeedsBiotecnología Agrícola y Biotecnología Alimentariavisual_art.visual_art_mediumBark//purl.org/becyt/ford/4 [https]Polymorphism Restriction Fragment LengthYEAST DIVERSITYFEMS Yeast Research
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Evolution of microbiological and chemical parameters during red wine making with extended post-fermentation maceration.

2014

Abstract The aim of the present work was to investigate the microbiological, chemical, and sensory characteristics of red wine subjected to post-fermentation maceration that was extended to 90 days. For this purpose, the ‘Aglianico di Taurasi’ grape was used as a case study. The total yeast concentration increased until day 40 of maceration and decreased thereafter, whereas the concentration of lactic acid bacteria slightly increased. Dekkera/Brettanomyces spp. and acetic acid bacteria were not detected. The yeast community was composed of Saccharomyces cerevisiae, Zygosaccharomyces bisporus, Metschnikowia pulcherrima, Hanseniaspora guilliermondii, Hanseniaspora uvarum, Pichia guilliermondi…

BrettanomycesFood HandlingColony CountColony Count MicrobialWineSaccharomyces cerevisiaeMicrobiologyTimechemistry.chemical_compoundMicrobialYeastsBotanyLactic acid bacteriaMaceration (wine)Lactic acid bacteria; Polyphenols; Prolonged post-fermentation maceration; Red wine production; Saccharomyces cerevisiae; Yeasts; Acetic Acid; Alcohols; Colony Count Microbial; Humans; Mycological Typing Techniques; Polyphenols; Saccharomyces cerevisiae; Taste; Time; Vitis; Wine; Yeasts; Fermentation; Food Handling; Food Microbiologyred wine long maceration microorganismsHumansVitisFood scienceRed wine productionAcetic acid bacteriaMycological Typing TechniquesAcetic AcidWinebiologyProlonged post-fermentation macerationfood and beveragesPolyphenolsSettore AGR/15 - Scienze E Tecnologie AlimentariGeneral Medicinebiology.organism_classificationchemistryAlcoholsTasteFermentationFood MicrobiologyHanseniaspora guilliermondiiFermentationMalic acidMetschnikowia pulcherrimaSettore AGR/16 - Microbiologia AgrariaFood ScienceInternational journal of food microbiology
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Design and performance testing of a real-time PCR assay for sensitive and reliable direct quantification of Brettanomyces in wine

2009

International audience; Because the yeast Brettanomyces produces volatile phenols and acetic acid, it is responsible for wine spoilage. The uncontrolled accumulation of these molecules in wine leads to sensorial defects that compromise wine quality, The need for a rapid, specific, sensitive and reliable method to detect this spoilage yeast has increased over the last decade. All these requirements are met by real-time PCR. We here propose improvements of existing methods to enhance the robustness of the assay. Six different protocols to isolate DNA from a wine and three PCR mix compositions were tested, and the best method was selected. Insoluble PVPP addition during DNA extraction by a cla…

BrettanomycesFood spoilageBrettanomycesWineBiologyMicrobiologyPolymerase Chain ReactionSensitivity and Specificity[ CHIM ] Chemical Sciences03 medical and health sciencesFood microbiology[CHIM]Chemical SciencesDNA Fungal030304 developmental biologyWine0303 health sciencesChromatography030306 microbiologyReproducibility of Resultsfood and beveragesGeneral MedicineRepeatabilitybiology.organism_classificationDNA extractionYeastStandard curveBiochemistryFood MicrobiologyFood Science
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Yeasts vectored by migratory birds collected in the Mediterranean island of Ustica and description of Phaffomyces usticensis f.a. sp. nov., a new spe…

2014

Nine yeast species belonging to genera Candida , Cryptococcus , Phaffomyces , Rhodotorula and Wickerhamomyces , and one species of Aureobasidium genus were isolated from the cloaca of migratory birds. Candida glabrata and C. inconspicua were the species most frequently isolated and Wickerhamomyces sylviae , which has recently been described as a new species isolated from bird cloaca, was again found. The majority of isolates showed the ability to grow up to 40 °C and/or at pH 3.0, two environmental conditions typical of the digestive tract of birds. The phylogenetic analysis of the D1/D2 domain of 26S rRNA gene placed the cultures of Phaffomyces in a new lineage that differed from the close…

Cactaceaephenotypic characterizationMolecular Sequence DataCryptococcusAureobasidiumRhodotorulaApplied Microbiology and BiotechnologyMicrobiologyNew species Yeast birdsBirdscactus-yeastMediterranean IslandsWickerhamomycesAscomycotaGenusPhaffomyces usticensis sp. novBotanyAnimalsPhylogenyRibosomalPhylogenetic treebiologyCandida glabrataphylogenetic analysisGeneral Medicinebiology.organism_classificationnovel speciesDelichon urbicumSettore AGR/11 - Entomologia Generale E ApplicataPhenotypeRNA RibosomalCactusRNADelichon urbicum; Phaffomyces usticensis sp. nov.; cactus-yeast; novel species; phenotypic characterization; phylogenetic analysis; Animals; Ascomycota; Birds; Cactaceae; Mediterranean Islands; Molecular Sequence Data; Phenotype; Phylogeny; RNA RibosomalSettore AGR/16 - Microbiologia Agraria
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Anhydrobiosis in yeast: influence of calcium and magnesium ions on yeast resistance to dehydration-rehydration

2010

The influence of calcium and magnesium ions on resistance to dehydration in the yeast, Saccharomyces cerevisiae, was investigated. Magnesium ion availability directly influenced yeast cells' resistance to dehydration and, when additionally supplemented with calcium ions, this provided further significant increase of yeast resistance to dehydration. Gradual rehydration of dry yeast cells in water vapour indicated that both magnesium and calcium may be important for the stabilization of yeast cell membranes. In particular, calcium ions were shown for the first time to increase the resistance of yeast cells to dehydration in stress-sensitive cultures from exponential growth phases. It is concl…

Calcium metabolismbiologyMagnesiumSaccharomyces cerevisiaechemistry.chemical_elementCalciummedicine.diseasebiology.organism_classificationMicrobiologyYeastBiochemistrychemistryGeneticsmedicineFermentationDehydrationMolecular BiologyMagnesium ionFEMS Microbiology Letters
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A urochordate putative homolog of human EB1, the protein which binds APC1

1996

Abstract The human EB1 protein has been cloned by virtue of its interaction with the C-terminus of the APC (adenomatous polyposis coli) protein, whose C-terminal truncated forms have been shown to accompany sporadic and familial forms of colorectal cancer. We have cloned a putative EB1 homolog from Botryllus schlosseri (Urochordata, Ascidiacea). The deduced protein is 287 amino acids long, and is identical with 48% of the residues in human EB1 and 24–25% in two yeast hypothetical proteins. We propose that such a high degree of conservation among EB1 homologs is indicative of an essential regulatory mechanism in eukaryotic cells.

Cancer ResearchAdenomatous polyposis coliMolecular Sequence Datamacromolecular substancesBotryllus schlosseriPolymerase Chain ReactionHomology (biology)Conserved sequenceBacterial ProteinsComplementary DNAAnimalsHumansAmino Acid SequenceUrochordataGeneticschemistry.chemical_classificationBase SequencebiologyfungiNucleic acid sequenceProteinsSequence Analysis DNAbiology.organism_classificationYeastAmino acidOncologychemistrybiology.proteinSequence AlignmentCancer Letters
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Cell volume homeostatically controls the rDNA repeat copy number and rRNA synthesis rate in yeast

2021

[Abstract] The adjustment of transcription and translation rates to the changing needs of cells is of utmost importance for their fitness and survival. We have previously shown that the global transcription rate for RNA polymerase II in budding yeast Saccharomyces cerevisiae is regulated in relation to cell volume. Total mRNA concentration is constant with cell volume since global RNApol II-dependent nascent transcription rate (nTR) also keeps constant but mRNA stability increases with cell size. In this paper, we focus on the case of rRNA and RNA polymerase I. Contrarily to that found for RNA pol II, we detected that RNA polymerase I nTR increases proportionally to genome copies and cell s…

Cancer ResearchTranscription GeneticCellGene ExpressionRNA polymerase IIYeast and Fungal ModelsProtein SynthesisQH426-470HaploidyBiochemistryPolymerasesSirtuin 2Transcription (biology)RNA Polymerase IHomeostasisCell Cycle and Cell DivisionGenetics (clinical)Silent Information Regulator Proteins Saccharomyces cerevisiaebiologyTranscriptional ControlEukaryotaChemical SynthesisGenomicsCell biologyNucleic acidsmedicine.anatomical_structureExperimental Organism SystemsRibosomal RNARNA polymeraseCell ProcessesRNA Polymerase IIResearch ArticleCell biologyCellular structures and organellesSaccharomyces cerevisiae ProteinsBiosynthetic TechniquesSaccharomyces cerevisiaeSaccharomyces cerevisiaeResearch and Analysis MethodsDNA RibosomalSaccharomycesModel OrganismsCyclinsDNA-binding proteinsmedicineRNA polymerase IGeneticsGene RegulationNon-coding RNAMolecular BiologyEcology Evolution Behavior and SystematicsCell SizeMessenger RNACèl·lules eucariotesOrganismsFungiRNABiology and Life SciencesProteinsGenes rRNARibosomal RNAModels Theoreticalbiology.organism_classificationYeastGenòmicabiology.proteinAnimal StudiesRNARibosomes
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Functional analysis ofp53 gene and the prognostic impact of dominant-negativep53 mutation in endometrial cancer

2005

In addition to the loss of function, mutant p53 can possess a dominant-negative effect on wild-type p53 and may also exert gain-of-function activity. It is not clear whether the functional status of p53 mutation contributes to differences in outcome in endometrial cancer. We collected a total of 92 RNA samples of high quality from endometrial cancer tissues, and the samples were subjected to yeast functional assay and sequencing for p53 mutations. The detected mutant p53 genes were further investigated for their dominant-negative activity using a yeast-based transdominance assay. p53 mutation was found in 24 out of 92 (26.1%) tumors, of which 10 exhibited no dominant-negative activity (rece…

Cancer ResearchTumor suppressor geneDNA Mutational AnalysisMutantBiologyYeastsmedicineHumansStage (cooking)GeneLoss functionNeoplasm StagingEndometrial cancerRNAMiddle AgedGenes p53Prognosismedicine.diseaseSurvival AnalysisEndometrial NeoplasmsOncologyMultivariate AnalysisMutation (genetic algorithm)Cancer researchRNABiological AssayFemaleInternational Journal of Cancer
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Influence of Galvanic Microcells on Growth of Pathogenic Bacteria and Candida Yeast

2017

The aim of the study was to evaluate the influence of electrodes on growth of pathogenic bacteria and Candida albicans yeast. In the study, following references bacteria strains were used: Staphylococcus aureus ATTC 6538; Enterococcus faecalis ATTC 29212 (V); Enterococcus hirae ATTC 105441 (VI) and yeast strain Candida albicans ATTC 10231 (C40). Microelectrodes were prepared by ALCOR Center. Estimation of the biocidal effect of electrodes was carried out by medium poisoning method. The assessment of adhesion to the surface was performed by a modified Hawser’s method. Presence of adhesion was assessed by SEM analysis. The highest inhibition zones were obtained for Staphylococcus aureus ATTC …

Candida reactionbiologyStaphylococcus inhibitionPathogenic bacteriaAdhesionbiology.organism_classificationmedicine.disease_causeEnterococcus faecalisYeastMicrobiologyEnterococcus hiraeStaphylococcus aureusEnterococcus inhibitionmedicineCandida albicansMicrocellsBacteriaJournal of Applied Microbiology and Biochemistry
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