Search results for "arabidopsis"

showing 10 items of 241 documents

An

2020

Intracellular acid stress inhibits plant growth by unknown mechanisms and it occurs in acidic soils and as consequence of other stresses. In order to identify mechanisms of acid toxicity, we screened activation-tagging lines of Arabidopsis thaliana for tolerance to intracellular acidification induced by organic acids. A dominant mutant, sbt4.13-1D, was isolated twice and shown to over-express subtilase SBT4.13, a protease secreted into endoplasmic reticulum. Activity measurements and immuno-detection indicate that the mutant contains less plasma membrane H+-ATPase (PMA) than wild type, explaining the small size, electrical depolarization and decreased cytosolic pH of the mutant but not orga…

NADPH oxidaseArabidopsis ProteinsArabidopsisNADPH OxidasesGerminationROSArticleOxidative StressProton-Translocating ATPasesMutationorganic acidsactivation-taggingH+-ATPaseSubtilisinsProtonsInternational journal of molecular sciences
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Expression of a vegetative-storage-protein gene from Arabidopsis is regulated by copper, senescence and ozone

2001

Emerging data suggest that the mechanisms regulating plant copper homeostasis could be implicated in stress and senescence signal transduction pathways. To gain insight into copper-modulated patterns of gene expression, copper-treated Arabidopsis thaliana (L.) Heynh. plants were analysed by mRNA differential display. The experimental conditions were selected using aggregation of ribulose-1,5-bisphosphate carboxylase-oxygenase (Rubisco) as a molecular sensor to monitor copper-induced oxidative stress. Two copper-induced messengers encoding a vegetative storage protein (VSP2) were isolated by this technique. Both clones differed in the length of their 3'-untranslated region according to the p…

ParaquatSenescenceCopper SulfateRibulose-Bisphosphate CarboxylaseMolecular Sequence DataArabidopsisPlant Sciencemedicine.disease_causeOzoneGene Expression Regulation PlantArabidopsisGene expressionGeneticsmedicineStorage proteinArabidopsis thalianaRNA MessengerCloning Molecularchemistry.chemical_classificationBase SequencebiologyArabidopsis ProteinsRuBisCOGene Expression Regulation DevelopmentalHydrogen Peroxidebiology.organism_classificationOxidative StresschemistryBiochemistrybiology.proteinSignal transductionSequence AnalysisCopperOxidative stressPlanta
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Putative p24 complexes in Arabidopsis contain members of the delta and beta subfamilies and cycle in the early secretory pathway

2013

p24 proteins are a family of type I membrane proteins localized to compartments of the early secretory pathway and to coat protein I (COPI)- and COPII-coated vesicles. They can be classified, by sequence homology, into four subfamilies, named p24α, p24β, p24γ, and p24δ. In contrast to animals and fungi, plants contain only members of the p24β and p24δ subfamilies, the latter probably including two different subclasses. It has previously been shown that transiently expressed red fluorescent protein (RFP)-p24δ5 (p24δ1 subclass) localizes to the endoplasmic reticulum (ER) at steady state as a consequence of highly efficient COPI-based recycling from the Golgi apparatus. It is now shown that tr…

PhysiologyArabidopsisGolgi ApparatusPlant ScienceEndoplasmic ReticulumGreen fluorescent proteinsymbols.namesakeArabidopsisImmunoprecipitationER–Golgi transportcoat protein II (COPII)Secretory pathwayMicroscopy ConfocalSecretory PathwaybiologyArabidopsis ProteinsEndoplasmic reticulumcoat protein I (COPI)COPIImmunogold labellingGolgi apparatussecretory pathway.biology.organism_classificationImmunohistochemistryCell biologyMicroscopy Electronp24 proteinsMembrane proteinsymbolsResearch PaperPlasmidsJournal of Experimental Botany
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Arabidopsis copper transport protein COPT2 participates in the crosstalk between iron deficiency responses and low phosphate signaling

2013

[EN] Copper and iron are essential micronutrients for most living organisms because they participate as cofactors in biological processes, including respiration, photosynthesis, and oxidative stress protection. In many eukaryotic organisms, including yeast (Saccharomyces cerevisiae) and mammals, copper and iron homeostases are highly interconnected; yet, such interdependence is not well established in higher plants. Here, we propose that COPT2, a high-affinity copper transport protein, functions under copper and iron deficiencies in Arabidopsis (Arabidopsis thaliana). COPT2 is a plasma membrane protein that functions in copper acquisition and distribution. Characterization of the COPT2 expr…

PhysiologyArabidopsisPlant SciencePlant RootsMembranes Transport and BioenergeticsGene Expression Regulation PlantArabidopsisThalianaHomeostasisArabidopsis thalianaSLC31 ProteinsGene-expressionCation Transport ProteinsChlorosisbiologyRevealsIron DeficienciesMetal homeostasisPlantsPlants Genetically ModifiedUp-RegulationTransport proteinPhenotypeBiochemistrySignal TransductionIronRecombinant Fusion ProteinsSaccharomyces cerevisiaechemistry.chemical_elementSaccharomyces cerevisiaeModels BiologicalPhosphatesEthyleneGeneticsmedicineBIOQUIMICA Y BIOLOGIA MOLECULARFamilyIron deficiency (plant disorder)Arabidopsis ProteinsBiological TransportRoot elongationSequence Analysis DNAbiology.organism_classificationmedicine.diseaseCopperPlant LeavesAcquisitionchemistrySeedlingsStarvationMutationCopper deficiencyCopper
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Coupled transport of Arabidopsis p24 proteins at the ER–Golgi interface

2012

p24 proteins are a family of type I membrane proteins localized to compartments of the early secretory pathway and to coat protein I (COPI)- and COPII-coated vesicles. They can be classified, by sequence homology, into four subfamilies, named p24α, p24β, p24γ, and p24δ. In contrast to animals and fungi, plants contain only members of the p24β and p24δ subfamilies. It has previously been shown that transiently expressed red fluorescent protein (RFP)–p24δ5 localizes to the endoplasmic reticulum (ER) as a consequence of highly efficient COPI-based recycling from the Golgi apparatus. Using specific antibodies, endogenous p24δ5 has now been localized to the ER and p24β2 to the Golgi apparatus in…

PhysiologyMolecular Sequence DataArabidopsisGolgi ApparatusPlant ScienceBiologyEndoplasmic Reticulumcoat protein (COP) IIcoat protein (COP) Isymbols.namesakeAmino Acid SequenceER–Golgi transportCOPIISecretory pathwayArabidopsis ProteinsVesicular-tubular clusterEndoplasmic reticulumMembrane ProteinsCOPIGolgi apparatussecretory pathwayTransport proteinCell biologyProtein TransportSecretory proteinp24 proteinssymbolsProtein BindingResearch PaperJournal of Experimental Botany
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The Arabidopsis COPT6 Transport Protein Functions in Copper Distribution Under Copper-Deficient Conditions

2013

Copper (Cu), an essential redox active cofactor, participates in fundamental biological processes, but it becomes highly cytotoxic when present in excess. Therefore, living organisms have established suitable mechanisms to balance cellular and systemic Cu levels. An important strategy to maintain Cu homeostasis consists of regulating uptake and mobilization via the conserved family of CTR/COPT Cu transport proteins. In the model plant Arabidopsis thaliana, COPT1 protein mediates root Cu acquisition, whereas COPT5 protein functions in Cu mobilization from intracellular storage organelles. The function of these transporters becomes critical when environmental Cu bioavailability diminishes. Ho…

PhysiologyMolecular Sequence DataSaccharomyces cerevisiaeMutantArabidopsisSaccharomyces cerevisiaePlant SciencePlant RootsCofactorCell membraneGene Expression Regulation PlantArabidopsisOrganellemedicineHomeostasisAmino Acid SequenceSLC31 ProteinsbiologyArabidopsis ProteinsMembrane transport proteinCell MembraneGenetic Complementation TestMembrane Transport ProteinsBiological TransportCell BiologyGeneral MedicinePlants Genetically Modifiedbiology.organism_classificationUp-RegulationTransport proteinCell biologyPlant LeavesMutagenesis Insertionalmedicine.anatomical_structureBiochemistrySeedsbiology.proteinPlant Vascular BundleSequence AlignmentCopperPlant ShootsPlant and Cell Physiology
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Functional characterization of the plastidial 3-phosphoglycerate dehydrogenase family in Arabidopsis.

2013

This work contributes to unraveling the role of the phosphorylated pathway of serine (Ser) biosynthesis in Arabidopsis (Arabidopsis thaliana) by functionally characterizing genes coding for the first enzyme of this pathway, 3-phosphoglycerate dehydrogenase (PGDH). We identified two Arabidopsis plastid-localized PGDH genes (3-PGDH and EMBRYO SAC DEVELOPMENT ARREST9 [EDA9]) with a high percentage of amino acid identity with a previously identified PGDH. All three genes displayed a different expression pattern indicating that they are not functionally redundant. pgdh and 3-pgdh mutants presented no drastic visual phenotypes, but eda9 displayed delayed embryo development, leading to aborted emb…

PhysiologyMutantMolecular Sequence DataArabidopsisPlant SciencePlant RootsGene Expression Regulation EnzymologicSerineBiochemistry and MetabolismGene Expression Regulation PlantComplementary DNAArabidopsisGeneticsSerineArabidopsis thalianaMetabolomicsAmino Acid SequencePlastidsPhosphorylationGenePhosphoglycerate DehydrogenasePhylogenyTapetumMicroscopy ConfocalbiologySequence Homology Amino AcidArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionGenetic Complementation Testfood and beveragesPlant Components Aerialbiology.organism_classificationPlants Genetically ModifiedPhenotypeIsoenzymesBiochemistryMultigene FamilyMutationSeedsPollenPlant physiology
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Molecular characterization and evolution of the protein phosphatase 2A B' regulatory subunit family in plants.

2002

Abstract Type 2A serine/threonine protein phosphatases (PP2A) are important components in the reversible protein phosphorylation events in plants and other organisms. PP2A proteins are oligomeric complexes constituted by a catalytic subunit and several regulatory subunits that modulate the activity of these phosphatases. The analysis of the complete genome of Arabidopsis allowed us to characterize four novel genes, AtB′ε, AtB′ζ,AtB′η, and AtB′θ, belonging to the PP2A B′ regulatory subunit family. Because four genes of this type had been described previously, this family is composed of eight members. Reverse transcriptase-polymerase chain reaction experiments showed thatAtB′ε mRNAs are prese…

PhysiologyProtein subunitMolecular Sequence DataArabidopsisPlant ScienceGene Expression Regulation EnzymologicEvolution MolecularGene Expression Regulation PlantArabidopsisGeneticsPhosphoprotein PhosphatasesArabidopsis thalianaProtein phosphorylationAmino Acid SequenceProtein Phosphatase 2GenePeptide sequencePhylogenyGenomic organizationGeneticsExpressed Sequence TagsbiologySequence Homology Amino AcidOryzaProtein phosphatase 2Plantsbiology.organism_classificationIsoenzymesBiochemistryMultigene FamilyResearch ArticlePlant physiology
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Improved Mesophyll Protoplast Culture and Plant Regeneration in Arabidopsis thaliana (L.) Heynh., Genotype Landsberg Erecta

1993

Summary The response of in vitro cultured Arabidopsis thaliana mesophyll protoplasts was investigated with the aim of characterising the crucial factors that affect plating efficiencies and plant regeneration. We selected the genotype Landsberg erecta, which is frequently used for genetic studies, but which is known to respond poorly in protoplast culture. Factors permitting vigorous vegetative growth of the donor plants, i.e. short light period and avoidance of high temperature, were found to be advantageous. Selection of competent leaves and fractionation of protoplast populations indicated that predominantly protoplasts derived from still expanding, yet not highly immature mesophyll cell…

PhysiologyVegetative reproductionRegeneration (biology)fungifood and beveragesPlant ScienceBiologyProtoplastbiology.organism_classificationIn vitroTissue cultureCytoplasmShootBotanyArabidopsis thalianaAgronomy and Crop ScienceJournal of Plant Physiology
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β-Aminobutyric Acid (BABA)-Induced Resistance in Arabidopsis thaliana: Link with Iron Homeostasis

2014

International audience; Bêta-Aminobutyric acid (BABA) is a nonprotein amino acid inducing resistance in many different plant species against a wide range of abiotic and biotic stresses. Nevertheless, how BABA primes plant natural defense reactions remains poorly understood. Based on its structure, we hypothesized and confirmed that BABA is able to chelate iron (Fe) in vitro. In vivo, we showed that it led to a transient Fe deficiency response in Arabidopsis thaliana plants exemplified by a reduction of ferritin accumulation and disturbances in the expression of genes related to Fe homeostasis. This response was not correlated to changes in Fe concentrations, suggesting that BABA affects the…

Physiology[SDV]Life Sciences [q-bio]IronMetaboliteArabidopsisPlant ImmunityBiologyIron Chelating AgentsAminobutyric acidERWINIA-CHRYSANTHEMI INFECTIONchemistry.chemical_compoundMetabolomicsGene Expression Regulation Plant[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyHomeostasisMetabolomicsFERRITIN SYNTHESISBOTRYTIS-CINEREATOMATO PLANTSGeneDisease ResistancePlant DiseasesBotrytis cinereachemistry.chemical_classificationAminobutyratesfungifood and beveragesGeneral Medicinebiology.organism_classificationPLANT IMMUNITYDL-3-AMINOBUTYRIC ACIDAmino acidPlant LeavesFerritinPhenotypeBiochemistrychemistryCHELATE REDUCTASESeedlingsDEFENSE RESPONSES[SDE]Environmental Sciencesbiology.proteinPHYTOPHTHORA-INFESTANSBotrytisREFERENCE GENESAgronomy and Crop ScienceMolecular Plant-Microbe Interactions®
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