Search results for "automate"

showing 10 items of 245 documents

Negligible effect of hypolimnetic oxygenation on the trophic state of Lake Jyväsjärvi, Finland

2016

Abstract Hypolimnetic oxygenation by pumping oxygen-rich surface water to the hypolimnion (HLO) is a commonly used tool for the restoration of nutrient-loaded dimictic lakes. However, in recent years its effectiveness has been questioned. In this case study we evaluated monitoring data covering a period of 23-years to show that, although experimental cessation of HLO drastically changed the lake's temperature and dissolved oxygen regimes, it did not significantly affect its trophic status. Thus, we recommend that the limited financial resources available are better directed towards further lowering the lake's external phosphorus load than continuing HLO.

0106 biological sciencesChlorophyll aChlorophyll ata1172chemistry.chemical_elementyear-round oxygenation010501 environmental sciencesAquatic Science01 natural scienceschemistry.chemical_compoundNutrientnutrientsautomated monitoring0105 earth and related environmental sciencesTrophic levelHydrology010604 marine biology & hydrobiologyPhosphorusOxygenationchemistryMonitoring datadissolved oxygenEnvironmental scienceta1181HypolimnionSurface waterLimnologica
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A decomposition approach to dual shuttle automated storage and retrieval systems

2016

[EN] Automated Storage and Retrieval Systems (AS/RS) have become vital in today¿s distribution and production environments, however it remains necessary to equip them with more efficient operational control policies. Motivated by real situations encountered by companies employing AS/RS, the present paper studies a miniload AS/RS system, with a dual shuttle crane in which a set of storage and retrieval requests must be scheduled such that the prioritized waiting time is minimized. Dual shuttle cranes have received minimal academic attention and thus continue to pose new problems that must be solved. The miniload AS/RS problem is addressed by decomposing it into a location assignment and sequ…

0209 industrial biotechnologyMathematical optimizationGeneral Computer ScienceComputer scienceESTADISTICA E INVESTIGACION OPERATIVA0211 other engineering and technologiesLogistics02 engineering and technologyAutomated storage and retrieval systemsSet (abstract data type)Dual shuttle020901 industrial engineering & automationDecomposition (computer science)HeuristicsMetaheuristicDecomposition021103 operations researchBranch and boundHeuristicControl policiesGeneral EngineeringWarehouseDual (category theory)Decomposition method (constraint satisfaction)HeuristicsComputers & Industrial Engineering
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A framework for data-driven adaptive GUI generation based on DICOM

2018

Computer applications for diagnostic medical imaging provide generally a wide range of tools to support physicians in their daily diagnosis activities. Unfortunately, some functionalities are specialized for specific diseases or imaging modalities, while other ones are useless for the images under investigation. Nevertheless, the corresponding Graphical User Interface (GUI) widgets are still present on the screen reducing the image visualization area. As a consequence, the physician may be affected by cognitive overload and visual stress causing a degradation of performances, mainly due to unuseful widgets. In clinical environments, a GUI must represent a sequence of steps for image investi…

0301 basic medicineDiagnostic ImagingAutomatedComputer scienceData-driven GUI generation; DICOM; Faceted classification; Graphical user interfaces; Medical diagnostic software; Algorithms; Brain; Cognition; Computers; Decision Support Systems Clinical; Diagnostic Imaging; Feasibility Studies; Humans; Magnetic Resonance Imaging; Medical Informatics; Pattern Recognition Automated; Software; Computer Graphics; Radiology Information Systems; User-Computer InterfaceGraphical user interfacesDecision Support SystemsHealth InformaticsPattern Recognitioncomputer.software_genrePattern Recognition Automated030218 nuclear medicine & medical imaging03 medical and health sciencesDICOMClinicalUser-Computer Interface0302 clinical medicineSoftwareCognitionHuman–computer interactionComputer GraphicsHumansDICOMGraphical user interfaceSettore ING-INF/05 - Sistemi Di Elaborazione Delle InformazioniFaceted classificationbusiness.industryComputersData-driven GUI generationBrainComputer Science Applications1707 Computer Vision and Pattern RecognitionMedical diagnostic softwareDecision Support Systems ClinicalMagnetic Resonance ImagingComputer Science ApplicationsVisualizationSoftware frameworkGraphical user interface030104 developmental biologyWorkflowRadiology Information SystemsInformation modelSoftware designFeasibility StudiesbusinesscomputerAlgorithmsMedical InformaticsSoftware
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Performance evaluation of a newly developed molecular assay for the accurate diagnosis of gastroenteritis associated with norovirus of genogroup II

2018

The performance of a newly proposed fully automated cassette-based sample-to-results solution for norovirus (NoV) detection, InGenius Norovirus ELITe MGB®, was evaluated. A total of 120 selected archival stool samples from children hospitalized for acute gastroenteritis were used to compare the results to a reference real-time RT-PCR. The InGenius NoV assay showed optimal diagnostic accuracy (sensitivity, 100%; specificity, 95.7%) and was able to correctly detect the entire wide panel of epidemiologically relevant genotypes tested. These preliminary results suggest that the InGenius NoV assay can be recommended as a valuable method for accurate diagnosis of NoV GII infection in epidemic and…

0301 basic medicineMalemedicine.medical_specialtySettore MED/07 - Microbiologia E Microbiologia ClinicaAdolescentGenotype030106 microbiologyDiagnostic accuracyBiologymedicine.disease_causeReal-Time Polymerase Chain ReactionSensitivity and SpecificityFeces03 medical and health sciencesMedical microbiologyVirologyGenotypemedicineHumansChildCaliciviridae InfectionsNoroviruCaliciviridae InfectionGastroenteritiReverse Transcriptase Polymerase Chain ReactionNorovirusInfantGeneral MedicineAcute gastroenteritisbacterial infections and mycosesVirologyGastroenteritis030104 developmental biologyCaliciviridae InfectionsFully automatedChild PreschoolNorovirusFeceFemaleHuman
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External Influences on Invertebrate Brain Histamine and Related Compounds via an Automated Derivatization Method for Capillary Electrophoresis.

2017

8 pages; International audience; Histamine has been shown to modulate visual system and photic behavior in arthropods. However, few methods are available for the direct quantification of histamine and its precursor and metabolites in arthropod brain. In this work, a method for the separation of histamine, its precursor histidine, and its metabolite N-methyl-histamine from brain extracts of a freshwater crustacean has been developed using capillary electrophoresis with laser-induced fluorescence detection. Molecules were tagged on their primary amine function with naphthalene-2,3-dicarboxaldehyde, but derivatized histamine and N-methyl-histamine exhibited poor stability in contrast to deriva…

0301 basic medicinePhysiologyCognitive NeuroscienceMetabolitelaser-induced fluorescence detectioninvertebratecapillary electrophoresisBiochemistry[ SDV.EE ] Life Sciences [q-bio]/Ecology environment03 medical and health scienceschemistry.chemical_compound0302 clinical medicineCapillary electrophoresisRiversin vial automated derivatizationAnimalsAmphipodaHistidineDerivatizationHistidine[SDV.EE]Life Sciences [q-bio]/Ecology environmentDetection limitAutomation LaboratoryChromatographyMethylhistaminesBrainElectrophoresis CapillaryReproducibility of ResultsCell BiologyGeneral MedicinecrustaceaFluorescence030104 developmental biologychemistry[ SDV.NEU ] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]Calibration[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]Amine gas treatingSeasons030217 neurology & neurosurgeryHistamineHistamineACS chemical neuroscience
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Genome-wide association meta-analysis for early age-related macular degeneration highlights novel loci and insights for advanced disease

2020

Abstract Background Advanced age-related macular degeneration (AMD) is a leading cause of blindness. While around half of the genetic contribution to advanced AMD has been uncovered, little is known about the genetic architecture of early AMD. Methods To identify genetic factors for early AMD, we conducted a genome-wide association study (GWAS) meta-analysis (14,034 cases, 91,214 controls, 11 sources of data including the International AMD Genomics Consortium, IAMDGC, and UK Biobank, UKBB). We ascertained early AMD via color fundus photographs by manual grading for 10 sources and via an automated machine learning approach for > 170,000 photographs from UKBB. We searched for early AMD loc…

0301 basic medicinegenetic structures610 MedizinGenome-wide association studyMacular Degeneration0302 clinical medicineAdvanced diseaseCD46Genetics (clinical)GeneticsInternational AMD genomics consortium (IAMDGC)ddc:6100303 health sciencesGenome-wide association study (GWAS)3. Good health030220 oncology & carcinogenesisAge-related macular degeneration (AMD)Meta-analysisResearch ArticleGenetic Markerslcsh:Internal medicineUK biobank (UKBB)lcsh:QH426-470Locus (genetics)GenomicsComputational biologyBiologyPolymorphism Single NucleotideGenome-wide association study (GWAS) Meta-analysis Age-related macular degeneration (AMD) Early AMD CD46 TYR International AMD genomics consortium (IAMDGC) UK biobank (UKBB) Machine-learning Automated phenotyping03 medical and health sciencesEarly AMDGeneticsmedicineHumansGenetic Predisposition to DiseaseGenome-wide Association Study (gwas) ; Meta-analysis ; Age-related Macular Degeneration (amd) ; Early Amd ; Cd46 ; Tyr ; International Amd Genomics Consortium (iamdgc) ; Uk Biobank (ukbb) ; Machine-learning ; Automated Phenotypinglcsh:RC31-1245Machine-learning030304 developmental biologyTYRCD46Macular degenerationmedicine.diseaseHuman geneticseye diseasesGenetic architectureMeta-analysislcsh:Genetics030104 developmental biologyGenetic LociCase-Control StudiesAutomated phenotypingHTRA1030221 ophthalmology & optometrysense organsGenome-Wide Association Study
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Association of interleukin-6 rs1800796 polymorphism with reduced cognitive performance in healthy older adults

2019

© 2018 Elsevier B.V. With increasing life expectancy, age-associated cognitive impairment is an escalating problem worldwide. Inflammation is one of the features that characterises cognitive decline and can stimulate neurodegeneration. Interleukin 6 (IL-6) is a cytokine frequently associated with a pro-inflammatory phenotype and increased levels have been associated with the pathogenesis of dementia. The rs1800796 polymorphism in the promoter region of IL-6 gene was previously shown to influence IL-6 expression and therefore we hypothesised this gene polymorphism would be associated with IL-6 plasma levels and cognitive performance of older adults. The present study investigated the associa…

0301 basic medicinekognitioAgingPhysiologyinterleukin 6ta311103 medical and health sciencesCognitive aging0302 clinical medicineSDG 3 - Good Health and Well-beingGeneticsmedicineDementiaEffects of sleep deprivation on cognitive performanceCognitive declineEpisodic memoryGenetics (clinical)InflammationIL-6tulehdusWorking memorybusiness.industryCambridge Neuropsychological Test Automated BatterysytokiinitCognitionta3142medicine.diseasers1800796030104 developmental biologyikääntyminen030220 oncology & carcinogenesis/dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_beingGene polymorphismgeneettiset tekijätbusinessdementia
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Validity and reliability of the CatWalk system as a static and dynamic gait analysis tool for the assessment of functional nerve recovery in small an…

2017

Introduction: A range of behavioral testing paradigms have been developed for the research of central and peripheral nerve injuries with the help of small animal models. Following any nerve repair strategy, improved functional outcome may be the most important evidence of axon regeneration. A novel automated gait analysis system, the CatWalk™, can measure dynamic as well as static gait patterns of small animals. Of most interest in detecting functional recovery are in particular dynamic gait parameters, coordination measures, and the intensity of the animals paw prints. This article is designed to lead to a more efficient choice of CatWalk parameters in future studies concerning the functio…

0301 basic medicinemedicine.medical_specialtyComputer scienceSettore MED/19 - Chirurgia PlasticaValidityautomated gait analysis systemPeripheral nerve regeneration03 medical and health sciencesBehavioral Neuroscience0302 clinical medicinePhysical medicine and rehabilitationdynamic and static gait parametersPeripheral Nerve InjuriesSmall animalmedicineAnimalsGaitReliability (statistics)Original Researchddc:617dynamic and static gait parameterAnimalPeripheral Nerve InjurieReproducibility of ResultsFunctional MethodRecovery of FunctionSwingFunctional recoveryGaitperipheral nerve regenerationNerve RegenerationDisease Models Animal030104 developmental biologyAutomated gait analysis systemGait analysisRat and mouse sciatic nerverat and mouse sciatic nerveDynamic and static gait parameters030217 neurology & neurosurgeryBrain and Behavior
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Automatic detection and measurement of nuchal translucency.

2017

In this paper we propose a new methodology to support the physician both to identify automatically the nuchal region and to obtain a correct thickness measurement of the nuchal translucency. The thickness of the nuchal translucency is one of the main markers for screening of chromosomal defects such as trisomy 13, 18 and 21. Its measurement is performed during ultrasound scanning in the first trimester of pregnancy. The proposed methodology is mainly based on wavelet and multi resolution analysis. The performance of our method was analysed on 382 random frames, representing mid-sagittal sections, uniformly extracted from real clinical ultrasound videos of 12 patients. According to the groun…

0301 basic medicinemedicine.medical_specialtyWavelet AnalysisFirst trimester of pregnancyHealth InformaticsSensitivity and SpecificityWavelet analysi030218 nuclear medicine & medical imagingPattern Recognition AutomatedMachine Learning03 medical and health sciencesPrenatal ultrasound0302 clinical medicineNuchal regionNuchal translucencyUltrasound fetal examinationMedian sagittal sectionNuchal Translucency MeasurementImage Interpretation Computer-AssistedMedicineHumansPixelbusiness.industryMulti resolution analysisUltrasoundReproducibility of ResultsPattern recognitionComputer Science Applications1707 Computer Vision and Pattern RecognitionComputer Science ApplicationsSurgeryClinical ultrasound030104 developmental biologyNuchal translucencyArtificial intelligenceDown SyndromebusinessNuchal Translucency MeasurementAlgorithmsComputers in biology and medicine
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Application of high-content screening for the study of hepatotoxicity: Focus on food toxicology

2020

Safety evaluation of thousands of chemicals that are directly added to or come in contact with food is needed. Due to the central role of the liver in intermediary and energy metabolism and in the biotransformation of foreign compounds, the hepatotoxicity assessment is essential. New approach methodologies have been proposed for the safety evaluation of compounds with the idea of rapidly gaining insight into effects on biochemical mechanisms and cellular processes and screening large number of compounds. In this sense, high-content screening (HCS) is the application of automated microscopy and image analysis for better understanding of complex biological functions and mechanisms of toxicity…

0303 health sciencesComputer scienceFood toxicologyCellular imagingEnergy metabolismFood Contamination04 agricultural and veterinary sciencesGeneral MedicineAutomated microscopyToxicology040401 food scienceCell LineAutomation03 medical and health sciences0404 agricultural biotechnologyDrug developmentHigh-content screeningImage Processing Computer-AssistedAnimalsHumansBiochemical engineeringChemical and Drug Induced Liver InjuryCells Cultured030304 developmental biologyFood ScienceFood and Chemical Toxicology
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