Search results for "binding"

showing 10 items of 3896 documents

Coordinative Binding of Polymers to Metal-Organic Framework Nanoparticles for Control of Interactions at the Biointerface

2019

Metal-organic framework nanoparticles (MOF NPs) are of growing interest in diagnostic and therapeutic applications, and due to their hybrid nature, they display enhanced properties compared to more established nanomaterials. The effective application of MOF NPs, however, is often hampered by limited control of their surface chemistry and understanding of their interactions at the biointerface. Using a surface coating approach, we found that coordinative polymer binding to Zr- fum NPs is a convenient way for peripheral surface functionalization. Different polymers with biomedical relevance were assessed for the ability to bind to the MOF surface. Carboxylic acid and amine containing polymers…

PolymersSurface PropertiesGeneral Physics and AstronomyNanoparticleBiointerfaceNanotechnology02 engineering and technology010402 general chemistry01 natural sciencesNanomaterialsAmphiphileHumansGeneral Materials ScienceMetal-Organic Frameworkschemistry.chemical_classificationChemistryfungiGeneral EngineeringProteinsBiological TransportPolymer021001 nanoscience & nanotechnology0104 chemical sciencesSurface coatingNanoparticlesSurface modificationMetal-organic frameworkZirconium0210 nano-technologyHeLa CellsProtein Binding
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Peculiar mechanism of solubilization of a sparingly water soluble drug into polymeric micelles. Kinetic and equilibrium studies.

2012

Complementary kinetic and equilibrium studies on the solubilization process of the sparingly water soluble tamoxifen (TAM) drug in polymeric aqueous solutions have been performed by using the spectrophotometric method. In particular, the amphiphilic copolymers obtained by derivatization of polymeric chain of poly(N-2-hydroxyethyl)-dl-aspartamide, PHEA, with poly(ethylene glycol)s, PEG (2000 or 5000 Da), and/or hexadecylamine chain, C16, namely PHEA-PEG2000-C16, PHEA-PEG5000-C16, PHEA-C16, have been employed. Preliminary to the kinetic and equilibrium data quantitative treatment, the molar absorption coefficient of TAM in polymeric micelle aqueous solution has been determined. By these studi…

PolymersSurface PropertiesKineticsMicellesparingly water soluble drug TAM polymeric micelle kineticchemistry.chemical_compoundReaction rate constantstomatognathic systemMaterials ChemistryCopolymerOrganic chemistryPhysical and Theoretical ChemistrySolubilityParticle SizeMicellesSettore CHIM/02 - Chimica FisicaAqueous solutionWaterBinding constantSurfaces Coatings and FilmsKineticsTamoxifenchemistryChemical engineeringSolubilityEthylene glycolThe journal of physical chemistry. B
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“Mitotic Slippage” and Extranuclear DNA in Cancer Chemoresistance: A Focus on Telomeres

2020

Mitotic slippage (MS), the incomplete mitosis that results in a doubled genome in interphase, is a typical response of TP53-mutant tumors resistant to genotoxic therapy. These polyploidized cells display premature senescence and sort the damaged DNA into the cytoplasm. In this study, we explored MS in the MDA-MB-231 cell line treated with doxorubicin (DOX). We found selective release into the cytoplasm of telomere fragments enriched in telomerase reverse transcriptase (hTERT), telomere capping protein TRF2, and DNA double-strand breaks marked by γH2AX, in association with ubiquitin-binding protein SQSTM1/p62. This occurs along with the alternative lengthening of telomeres (ALT) and DNA repa…

PolyploidizationALTSQSTM1/p62lcsh:ChemistryNeoplasmsSequestosome-1 Proteincellular senescenceTelomeric Repeat Binding Protein 2mtTP53 cancerTelomeraseAmoeboid conversionlcsh:QH301-705.5Telomere ShorteningSpectroscopyAntibiotics AntineoplasticGeneral MedicineTelomereComputer Science ApplicationsCell biologyinverted meiosisExtranuclear DNA<i>mtTP53</i> cancerSpo11DNA repairTelomere CappingMitosisBudding of mitotic progenygenotoxic treatmentamoeboid conversionInverted meiosisBiologyCellular senescenceArticleCatalysisInorganic ChemistryMeiosisCell Line Tumorextranuclear DNAHumansTelomerase reverse transcriptasePhysical and Theoretical ChemistryMolecular BiologyMitosisCell ProliferationGenotoxic treatmentOrganic ChemistryRecombinational DNA RepairCell Cycle CheckpointsDNA<i>SQSTM1/p62</i>polyploidizationTelomerelcsh:Biology (General)lcsh:QD1-999DoxorubicinDrug Resistance Neoplasmbiology.proteinHomologous recombinationbudding of mitotic progenyDNA DamageInternational Journal of Molecular Sciences
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Analysis of mebendazole binding to its target biomolecule by laser flash photolysis

2016

[EN] Mebendazole (MBZ) and related anticancer benzimidazoles act binding the beta-subunit of Tubulin (TU) before dimerization with alpha-TU with subsequent blocking microtubule formation. Laser flash photolysis (LFP) is a new tool to investigate drug-albumin interactions and to determine binding parameters such as affinity constant or population of binding sites. The aim of this study was to evaluate the interactions between the nonfluorescent mebendazole (MBZ) and its target biomolecule TU using this technique. Before analyzing the MBZ@TU complex it was needed to determine the photophysical properties of MBZ triplet excited state ((3)MBZ*) in different media. Hence, 3MBZ* showed a transien…

PopulationBiophysicsBinding constantElectron donor010402 general chemistryPhotochemistry01 natural sciencesAnticancer drugschemistry.chemical_compoundQUIMICA ORGANICAMebendazole triplet excited stateTubulinUltrafast laser spectroscopyRadiology Nuclear Medicine and imagingeducationchemistry.chemical_classificationeducation.field_of_studyRadiationPhotolysisRadiological and Ultrasound Technology010405 organic chemistryPhosphorescenceLasersPhotodissociationTemperatureLaser flash photolysisElectron acceptorBinding constant0104 chemical sciencesMebendazolechemistryExcited stateFlash photolysisThermodynamicsSpectrophotometry UltravioletProtein Binding
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l-Glutamate receptor binding in bovine retina

1982

Using a centrifugation technique saturable specific [ 3 H]glutamate binding in bovine retina could be demonstrated. Scatchard analysis revealed only one population of binding sites with a dissociation constant of about 3 μ m and a maximal number of binding sites of about 0·2 pmol/mg retinal protein. Several glutamic acid analogues inhibit specific [ 3 H]glutamate binding in bovine retina with half-maximal inhibitory concentrations similar to those reported in other areas of the CNS. Specific [ 3 H]glutamate binding and sodium dependent synaptosomal uptake of glutamate are largely concentrated in the P2 fraction of bovine retina homogenates consisting of conventionally sized synaptosomes. Th…

PopulationGlutamic AcidReceptors Cell SurfaceBiologyInhibitory postsynaptic potentialRetinaCellular and Molecular NeuroscienceGlutamatesAnimalsCentrifugationBinding siteeducationeducation.field_of_studyDose-Response Relationship DrugSodiumGlutamate receptorGlutamate bindingGlutamic acidSensory SystemsReceptors NeurotransmitterDissociation constantOphthalmologyReceptors GlutamateBiochemistryCattleSubcellular FractionsExperimental Eye Research
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Pressure-Induced Binding Sites in Molecularly Imprinted Network Polymers

1997

Molecular imprinting in network polymers under high pressure was studied as a means of inducing selective binding sites for molecular recognition. Network polymers of methacrylic acid and ethylene ...

Pore sizechemistry.chemical_classificationEthylenePolymers and PlasticsOrganic ChemistryPolymerInorganic Chemistrychemistry.chemical_compoundMolecular recognitionMethacrylic acidchemistryHigh pressurePolymer chemistryMaterials ChemistryBinding siteMolecular imprintingMacromolecules
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Mode of primary binding to target membranes and pore formation induced by Vibrio cholerae cytolysin (hemolysin).

1997

Vibrio cholerae cytolysin (VCC) is produced by many non-choleratoxigenic strains of V. cholerae, and possibly represents a relevant pathogenicity determinant of these bacteria. The protein is secreted as a pro-toxin that is proteolytically cleaved to yield the active toxin with a molecular mass of approximately 63 kDa. We here describe a simple procedure for preparative isolation of mature VCC from bacterial culture supernatants, and present information on its mode of binding and pore formation in biological membranes. At low concentrations, toxin monomers interact with a high-affinity binding site on highly susceptible rabbit erythrocytes. This as yet unidentified binding site is absent on…

Pore-forming toxinBinding SitesToxinCytotoxinsErythrocyte MembraneMolecular Sequence DataAerolysinHemolysinBiologymedicine.disease_causeBiochemistryTransmembrane proteinMolecular WeightBiochemistryVibrio choleraemedicineAnimalsHumansCytolysinAmino Acid SequenceRabbitsBinding siteVibrio choleraeEuropean journal of biochemistry
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Application of 3-Quinolinoyl Picket Porphyrins to the Electroreduction of Dioxygen to Water: Mimicking the Active Site of Cytochromec Oxidase

2001

International audience

PorphyrinsHemeproteinReducing agentIronchemistry.chemical_elementPhotochemistryElectrochemistry[ CHIM ] Chemical SciencesBiochemistryOxygenElectron Transport Complex IVO-O activationcytochrome c oxidase[CHIM]Chemical SciencesCytochrome c oxidaseBinding siteMolecular BiologyComputingMilieux_MISCELLANEOUSBinding SitesbiologyChemistryMolecular MimicryOrganic ChemistryActive siteElectron Transport Complex IVheme proteinsoxidoreductasesOxygenelectrochemistryReducing Agentsbiology.proteinMolecular MedicineIndicators and ReagentsSpectrophotometry UltravioletOxidation-ReductionCopperChemBioChem
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Study of the benzene⋅N2 intermolecular potential-energy surface

2003

The intermolecular potential-energy surface pertaining to the interaction between benzene and N2 is investigated theoretically and experimentally. Accurate intermolecular interaction energies are evaluated for the benzene–N2 van der Waals complex using the coupled cluster singles and doubles including connected triples [CCSD(T)] method and the aug-cc-pVDZ basis set extended with a set of 3s3p2d1f1g midbond functions. After fitting the energies to an analytic function, the intermolecular Schrödinger equation is solved to yield energies, rotational constants, and Raman-scattering coefficients for the lowest intermolecular levels of several benzene–N2 isotopomers. Experimentally, intermolecula…

Potential Energy SurfacesCoupled Cluster CalculationsNitrogenBinding energyGeneral Physics and AstronomyPotential Energy Functionssymbols.namesakePhysics and Astronomy (all)IsomerismQuasimoleculesRotational IsomerismPhysics::Atomic and Molecular ClustersQuantum-mechanical explanation of intermolecular interactionsRotational StatesPhysical and Theoretical ChemistryPhysics::Chemical Physics:FÍSICA::Química física [UNESCO]Basis setSchrodinger EquationChemistryOrganic CompoundsIsotope EffectsIntermolecular forceStimulated Raman ScatteringUNESCO::FÍSICA::Química físicaCoupled clustersymbolsAtomic physicsvan der Waals forceOrganic Compounds ; Nitrogen ; Quasimolecules ; Potential Energy Surfaces ; Potential Energy Functions ; Coupled Cluster Calculations ; Rotational States ; Isomerism ; Isotope Effects ; Stimulated Raman Scattering ; Rotational Isomerism ; Schrodinger EquationRaman spectroscopyRaman scattering
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Orphan nuclear receptor binding site in the human inducible nitric oxide synthase promoter mediates responsiveness to steroid and xenobiotic ligands

2002

Constitutive androstane receptor (CAR) and pregnane X receptor (PXR) are members of the nuclear receptor superfamily that regulate target gene transcription in a ligand-dependent manner. CAR and PXR have a rather broad, overlapping set of ligands that range from natural steroids to xenobiotics and also recognize similar DNA binding sites, referred to as response elements (REs), primarily in promoter regions of cytochrome P450 (CYP) genes. In this study, a CAR and PXR RE, composed of a direct repeat of two GGTTCA motifs in a distance of 4 nucleotides (DR4), was identified in the promoter of the human inducible nitric oxide (NO) synthase (iNOS) gene, which is the first nuclear receptor bindin…

Pregnane X receptorCell BiologyRetinoid X receptorBiologydigestive systemBiochemistryCalcitriol receptorCell biologyBiochemistryNuclear receptorDownregulation and upregulationConstitutive androstane receptorBinding siteReceptorMolecular BiologyJournal of Cellular Biochemistry
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