Search results for "bond"

showing 10 items of 3527 documents

How does the global electron density transfer diminish activation energies in polar cycloaddition reactions? A Molecular Electron Density Theory study

2017

Abstract The key role of the Global Electron Density Transfer (GEDT) in polar cycloaddition reactions is analysed within the Molecular Electron Density Theory (MEDT) using Density Functional Theory (DFT) calculations at the MPWB1K/6-311G(d) computational level. A comparative MEDT study of the non-polar Diels-Alder reaction between cyclopentadiene (Cp) and ethylene and the polar Diels-Alder reaction between Cp and tetracyanoethylene makes it possible to establish that the GEDT taking place in the direction of the transition state structures favours the bonding changes required for the formation of the new C C single bonds along polar cycloaddition reactions. Analysis of the reactivity indice…

Electron density010405 organic chemistryStereochemistryOrganic ChemistryTetracyanoethylene010402 general chemistry01 natural sciencesBiochemistryCycloaddition0104 chemical scienceschemistry.chemical_compoundchemistryChemical physicsDrug DiscoveryPolarSingle bondReactivity (chemistry)Density functional theoryGround stateTetrahedron
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Carbonyl compounds of Rh, Ir, and Mt: electronic structure, bonding and volatility

2020

With the aim to render assistance to future experiments on the production and investigation of chemical properties of carbonyl compounds of element 109, Mt, calculations of the molecular properties of M(CO)4 and MH(CO)4, where M = Rh, Ir, and Mt, and of the products of their decomposition, M(CO)3 and MH(CO)3, were performed using relativistic Density Functional Theory and Coupled-Cluster methods implemented in the ADF, ReSpect and DIRAC software suites. According to the results, MH(CO)4 should be formed at experimental conditions from the M atom with a mixture of CO and He gases. The calculated first M–CO bond dissociation energies (FBDE) of Mt(CO)4 and MtH(CO)4 turned out to be significant…

Electron densityAdsorptionChemistryGeneral Physics and AstronomyPhysical chemistryDensity functional theoryInteraction modelElectronic structurePhysical and Theoretical ChemistryVolatility (chemistry)QuartzBond-dissociation energyPhysical Chemistry Chemical Physics
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Inter- and intramolecular bonding in 1,3,5-triamino-2,4,6-trinitrobenzene: An experimental and theoretical quantum theory of atoms in molecules (QTAI…

2017

Chemical bonding in the triclinic phase of 1,3,5-triamino-2,4,6-trinitrobenzene (TATB) has been analyzed based on the experimental electron density derived from X-ray diffraction data obtained at 20 K. The results have been compared with those from solid state theoretical calculations. The total electron density has been analyzed in terms of the Quantum Theory of Atoms in Molecules (QTAIM). Features of the covalent bonds demonstrate the presence of multiple bonds of various order. Strong intramolecular hydrogen bonds and weaker intermolecular bonds within the layer structure are characterized by the properties of their (3, −1) critical points. Weaker interactions, predominantly O···O, betwe…

Electron densityChemistryHydrogen bondAtoms in moleculesIntermolecular force02 engineering and technologyGeneral ChemistryTriclinic crystal system010402 general chemistry021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural sciences0104 chemical sciencesChemical bondCovalent bondQuantum mechanicsIntramolecular forceGeneral Materials Science0210 nano-technologyCrystal Growth & Design
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Hydrogen-Bond Cooperative Effects in Small Cyclic Water Clusters as Revealed by the Interacting Quantum Atoms Approach

2013

The cooperative effects of hydrogen bonding in small water clus- ters (H2O)n (n = 3-6) have been studied by using the partition of the electronic energy in accordance with the interact- ing quantum atoms (IQA) approach. The IQA energy splitting is comple- mented by a topological analysis of the electron density (1(r)) compliant with the quantum theory of atoms-in-mole- cules (QTAIM) and the calculation of electrostatic interactions by using one- and two-electron integrals, thereby avoiding convergence issues inherent to a multipolar expansion. The results show that the cooperative effects of hy- drogen bonding in small water clusters arise from a compromise between: 1) the deformation energ…

Electron densityChemistryHydrogen bondOrganic ChemistryIntermolecular forceGeneral ChemistryInteraction energyElectrostaticsCatalysisDelocalized electronChemical physicsComputational chemistryCluster (physics)MoleculeChemistry - A European Journal
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A molecular electron density theory study of the [3 + 2] cycloaddition reaction of nitrones with strained allenes

2017

Indexación: Scopus. The [3 + 2] cycloaddition (32CA) reaction of C-phenyl-N-tert-butylnitrone with 1,2-cyclohexadiene (CHDE), a strained allene, has been studied within Molecular Electron Density Theory (MEDT) at the DFT B3LYP/6-311G(d,p) computational level. This non-polar 32CA reaction, which takes place through a non-concerted two-stage one-step mechanism, proceeds with a moderate Gibbs free activation energy of 22.7 kcal mol-1, and presents low stereo- and regioselectivities. The reaction begins by the creation of a pseudoradical center at the central carbon of the strained allene with a relatively low energy cost, which immediately promotes the formation the first C-C single bond. This…

Electron densityComputation theoryGeneral Chemical EngineeringAlleneActivation energy010402 general chemistryPhotochemistry01 natural scienceschemistry.chemical_compoundsymbols.namesakeComputational chemistryActivation energySingle bondReactivity (chemistry)CycloadditionStrain (chemistry)010405 organic chemistryChemistryGeneral ChemistryCycloadditionCarbonHydrocarbons0104 chemical sciencesGibbs free energysymbolsElectron density measurement
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Theoretical study of the molecular structure and the stability of neutral and reduced tetracyanoethylene

2003

Abstract The molecular structure and the stability of neutral, anionic, and dianionic tetracyanoethylene (TCNE) have been studied with MP2, coupled-cluster (CC), and density functional theory (DFT) procedures. The optimized geometries are in agreement with the available experimental data, although significant deviations for the CN bond distance have been obtained at the MP2 level. The adiabatic electron affinity of TCNE calculated with the B3LYP method is overestimated by 0.32 eV. In the light of the CC results, the source of such an overestimation is suggested to lie on the theoretical approach, rather than on a too low experimental value.

Electron densityGeneral Physics and AstronomyTetracyanoethyleneMolecular physicsBond lengthchemistry.chemical_compoundMolecular geometrychemistryComputational chemistryAb initio quantum chemistry methodsElectron affinityPhysics::Atomic and Molecular ClustersMoleculeDensity functional theoryPhysics::Chemical PhysicsPhysical and Theoretical ChemistryChemical Physics Letters
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The nature of inter- and intramolecular interactions in F2OXe…HX (X= F, Cl, Br, I) complexes

2015

Electronic structure of the XeOF2 molecule and its two complexes with HX (X= F, Cl, Br, I) molecules have been studied in the gas phase using quantum chemical topology methods: topological analysis of electron localization function (ELF), electron density, ρ(r), reduced gradient of electron density |RDG(r)| in real space, and symmetry adapted perturbation theory (SAPT) in the Hilbert space. The wave function has been approximated by the MP2 and DFT methods, using APF-D, B3LYP, M062X, and B2PLYP functionals, with the dispersion correction as proposed by Grimme (GD3). For the Xe-F and Xe=O bonds in the isolated XeOF2 molecule, the bonding ELF-localization basins have not been observed. Accord…

Electron densityQuantum chemical topologyXenonksenonElectronic structure010402 general chemistrynoble gas complexes01 natural sciencesCatalysisNoble gas complexesInorganic ChemistryComputational chemistry0103 physical sciencesMoleculePhysical and Theoretical ChemistryTopology (chemistry)Original Paper010304 chemical physicsSAPTHydrogen bondChemistryOrganic ChemistryElectron localization function0104 chemical sciencesComputer Science ApplicationsCrystallographyELFComputational Theory and MathematicsCovalent bondIntramolecular forcequantum chemical topology
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Theoretical study on the molecular mechanism of the [5 + 2] vs. [4 + 2] cyclization mediated by Lewis acid in the quinone system

2013

[EN] The thermal and Lewis acid (LA) catalyzed cyclizations of quinone 1 involved in the synthesis of Colombiasin A and Elipsaterosin B have been theoretically studied using DFT methods at the B3LYP/6-311G(d,p) computational level. B3LYP calculations suggest that the formal endo [4 + 2] cycloadduct allowing the synthesis of Colombiasin A is preferentially formed under thermal conditions, while in the presence of the BF3 LA catalyst the formal [5 + 2] cycloadduct is seen, allowing the synthesis of Elipsaterosin B. The BF3 LA catalyst not only accelerates the nucleophilic attack on the C2 carbon of the quinone framework through a more polar C-C bond formation, but also provokes a different el…

Electron localization functionChemistryStereochemistryOrganic ChemistryCycloaddition reactionBiochemistryCatalysisQuinoneNucleophileDiels-alder reactionIntramolecular forceElf analysis(-) Elisapterosin-BElectrophilePolarizable continuum modelSingle bondLewis acids and bases(-) Colombiasin-APhysical and Theoretical ChemistryTopological analysisBond formationDiels–Alder reactionOrganic & Biomolecular Chemistry
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Understanding the regioselectivity in hetero Diels–Alder reactions. An ELF analysis of the reaction between nitrosoethylene and 1-vinylpyrrolidine

2013

[EN] The regioselectivity in the hetero Diels-Alder reaction between nitrosoethylene 1 and 1-vinylpyrrolidine 2 has been studied by a comparative ELF bonding analysis along the IRC of the endo/ortho and endo/meta regioisomeric channels at the B3LYP/6-31G*. level. Along the most favorable endo/ortho regioisomeric channel, the C-C sigma bond is first formed by coupling of two pseudoradical centers located at the most electrophilic carbon of 1 and the most nucleophilic center of 2. Formation of these relevant pseudoradical centers, which depend on the total charge transfer process along the polar reaction, and not on the approach mode of each reagent, is well characterized by analysis of the a…

Electron localization functionParameterChemistryOrganic ChemistryDensityRegioselectivityPhotochemistryCycloaddition reactionBiochemistryBond-formationElectron localization functionIndexIonNucleophileRadical ionReagentDrug DiscoveryElectrophileDiels alderQuantitative characterizationElectrophilicityTopological analysis13-DipolarTetrahedron
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Theoretical Study of the 15- and 17-Electron Structures of Cyclopentadienylchromium(III) and Cyclopentadienylmolybdenum(III) Complexes. Dichloride an…

1997

International audience; The structure and the energetics of the model systems CpMX2(PH3) + PH3 ⇄ CpMX2(PH3)2 (Cp = cyclopentadienyl; M = Cr, Mo; X = Cl, CH3) are studied by performing Møller−Plesset second order (MP2) and density functional theory (DFT) calculations. Extended basis sets are employed in the geometry optimizations. The results indicate that the structural preference can be traced back to the competition between electron pairing stabilization and M−P bond dissociation energy along the spin doublet surface. At all levels of calculation, the energy splitting, a measure of the cost of pairing the electron during the promotion process from the quartet ground state to the excited d…

Electron pairEnergy010405 organic chemistryChemistryElectrical energy010402 general chemistryLigands01 natural sciencesBond-dissociation energyQuantum mechanics0104 chemical sciences[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryCrystallographyCyclopentadienyl complexComputational chemistryMetalsExcited statePairingDensity functional theory[CHIM.COOR]Chemical Sciences/Coordination chemistryPhysical and Theoretical ChemistryGround stateDoublet state
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