Search results for "ck"

showing 10 items of 18632 documents

SILVOLIVE, a Germplasm Collection of Wild Subspecies With High Genetic Variability as a Source of Rootstocks and Resistance Genes for Olive Breeding

2020

15 páginas.- 5 figuras.- 1 tabla.- referencias.- The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fpls.2020.00629/full#supplementary-material

0106 biological sciences0301 basic medicineGermplasmmolecular markersBranching[SDV]Life Sciences [q-bio]media_common.quotation_subjectPlant Sciencelcsh:Plant cultureBiologySubspecies01 natural sciencesAdaptabilityvigor03 medical and health sciencesgenetic variabilitybranchingwild germplasmlcsh:SB1-1110Genetic variabilityCultivarOlea europaeaComputingMilieux_MISCELLANEOUSmedia_commonHybridRootstocksOriginal ResearchGraftingMolecular markersfood and beverages15. Life on landrootstockbiology.organism_classificationgraftingHorticulture030104 developmental biologyOleaVigorGenetic variabilityRootstockWild germplasm010606 plant biology & botanyF30 Plant genetics and breeding
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Acceptor Specificity of Amylosucrase from Deinococcus radiopugnans and Its Application for Synthesis of Rutin Derivatives

2016

The transglycosylation activity of amylosucrase (ASase) has received significant attention owing to its use of an inexpensive donor, sucrose, and broad acceptor specificity, including glycone and aglycone compounds. The transglycosylation reaction of recombinant ASase from Deinococcus radiopugnans (DRpAS) was investigated using various phenolic compounds, and quercetin-3-O-rutinoside (rutin) was found to be the most suitable acceptor molecule used by DRpAS. Two amino acid residues in DRpAS variants (DRpAS Q299K and DRpAS Q299R), assumed to be involved in acceptor binding, were constructed by site-directed mutagenesis. Intriguingly, DRpAS Q299K and DRpAS Q299R produced 10-fold and 4-fold hig…

0106 biological sciences0301 basic medicineGlycosylationGlycosylationStereochemistryRutinAmino Acid Motifs01 natural sciencesApplied Microbiology and BiotechnologySubstrate Specificity03 medical and health sciencesRutinchemistry.chemical_compoundAmylosucraseGlucosyltransferasesBacterial Proteins010608 biotechnologyDeinococcusBinding siteBinding SitesbiologyGeneral Medicinebiology.organism_classificationAcceptorMolecular Docking SimulationKinetics030104 developmental biologyAglyconechemistryGlucosyltransferasesbiology.proteinDeinococcusBiotechnologyJournal of Microbiology and Biotechnology
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Habitat Discontinuities Separate Genetically Divergent Populations of a Rocky Shore Marine Fish.

2016

Habitat fragmentation has been suggested to be responsible for major genetic differentiations in a range of marine organisms. In this study, we combined genetic data and environmental information to unravel the relative role of geography and habitat heterogeneity on patterns of genetic population structure of corkwing wrasse (Symphodus melops), a rocky shore species at the northern limit of its distribution range in Scandinavia. Our results revealed a major genetic break separating populations inhabiting the western and southern coasts of Norway. This genetic break coincides with the longest stretch of sand in the whole study area, suggesting habitat fragmentation as a major driver of genet…

0106 biological sciences0301 basic medicineHeredityRange (biology)Population geneticslcsh:Medicine01 natural sciencesRocky shoreGene FrequencyEnvironmental GeographyEthnicitieslcsh:Scienceeducation.field_of_studyMultidisciplinaryHabitat fragmentationbiologyGeographyEcologyNorwayFishesHabitatsPhylogeographyHabitatBiogeographyResearch ArticleGene FlowNorwegian PeoplePopulation010603 evolutionary biology03 medical and health sciencesparasitic diseasesGeneticsAnimalseducationAllelesEcosystemEvolutionary BiologyPopulation BiologyEcology and Environmental Sciencesfungilcsh:RBiology and Life SciencesGenetic VariationPelagic zoneBayes TheoremDNASequence Analysis DNAbiology.organism_classification030104 developmental biologyGenetics PopulationGenetic LociPeople and PlacesEarth SciencesGenetic PolymorphismPopulation Groupingslcsh:QCorkwing wrassePopulation GeneticsMicrosatellite RepeatsPLoS ONE
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Direct and correlated responses to bi-directional selection on pre-adult development time in Drosophila montana.

2019

Selection experiments offer an efficient way to study the evolvability of traits that play an important role in insects’ reproduction and/or survival and to trace correlations and trade-offs between them. We have exercised bi-directional selection on Drosophila montana flies’ pre-adult development time under constant light and temperature conditions for 10 generations and traced the indirect effects of this selection on females’ diapause induction under different day lengths, as well as on the body weight and cold tolerance of both sexes. Overall, selection was successful towards slow, but not towards fast development. However, all fast selection line replicates showed at the end of selecti…

0106 biological sciences0301 basic medicineMalePhysiologymahlakärpäsetmedia_common.quotation_subjectAcclimatizationPhotoperiodCircadian clockevoluutiopre-adult developmental timeZoologyreproductive diapauseDiapauseBiologyDiapause Insect01 natural sciencestalvehtiminenbi-directional selection experimentbody weight03 medical and health scienceskylmänkestävyysControl lineAnimalsCircadian rhythmpaino (fysiikka)Selection GeneticSelection (genetic algorithm)media_commonvuorokausirytmiluonnonvalintaDirectional selectionBody WeightPupacold tolerancecritical day lengthEvolvabilityCold Temperature010602 entomology030104 developmental biologyInsect ScienceLarvata1181DrosophilaFemaleReproductionJournal of insect physiology
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Gaining Insight into Exclusive and Common Transcriptomic Features Linked with Biotic Stress Responses in Malus

2017

Identifying key information in transcriptomic data is very important, especially when the “omic” study deals with plant responses to stresses in field conditions where a high number of variables and disturbing factors may affect the analysis. In this meta-analysis we collected 12 transcriptomic works in Malus in order to identify which key genes, proteins, gene categories are involved in general plant pathological conditions and those features linked with exclusive biotic stress responses. Those genes that are only related with molecular responses to pathogen attacks and those linked with other plant physiological processes were identified. A pipeline composed by pathway and gene set enrich…

0106 biological sciences0301 basic medicineMalusPlant ScienceComputational biologylcsh:Plant cultureErwinia01 natural sciencesTranscriptometranscriptomics03 medical and health sciencesSettore AGR/07 - Genetica AgrariaHeat shock proteinBotanylcsh:SB1-1110GeneTranscription factorOriginal Researchbiologybiotic stresses; Malus; meta-analysis; protein-protein interaction network; transcriptomicsfood and beveragesBiotic stressbiotic stressesbiology.organism_classificationmeta-analysisCrosstalk (biology)030104 developmental biologyMalusbiotic stresses Malus meta-analysis protein-protein interaction network transcriptomicsprotein-protein interaction network010606 plant biology & botanyFrontiers in Plant Science
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Intestinal parasites of unisexual and bisexual lizards Darevskia spp. (Lacertidae) from Northeastern Anatolia

2016

Summary Four bisexual and two unisexual species of the lizard genus Darevskia from northeastern Anatolia were searched for intestinal parasites in adult specimens. One cestode, Nematotaenia tarentolae, and two nematode species, Spauligodon saxicolae and Strongyloides darevskyi, were found, the latest identified as a Darevskia specialist. No major differences between host species were recorded. The very low infection rates and diversity result in depauperate helminth communities for all these lacertid lizards being the lowest among the Palaearctic saurians. Patterns of these helminth communities are compared with those observed in other lacertid lizards from Anatolia and Europe.

0106 biological sciences0301 basic medicineMedicine (General)biologyEcology (disciplines)Agriculture (General)caucasian rock lizardsparthenogensZoology030108 mycology & parasitologyparasitesbiology.organism_classification010603 evolutionary biology01 natural sciencesS1-97203 medical and health sciencesDarevskiaR5-920LacertidaeturkeyAnimal Science and ZoologyParasitologyHelminthologia
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Noise elicits hematological stress parameters in Mediterranean damselfish (Chromis chromis, perciformes): A mesocosm study

2017

In the last few decades, technological developments and the widespread rise of anthropic activities have increased the exposure of organisms to noise pollution, thus evoking great interest in its biological effects, particularly on the immune system. The aim of the present work was to investigate some of the biochemical parameters in the blood of Chromis chromis (Linnaeus, 1758) following in vivo exposure to noise levels of 200 and 300 Hz. Our results revealed that, compared to the control specimens, the fish exposed to noise had significantly increased levels of stress biomarkers such as glucose, lactate and total proteins in plasma, as well as a rise in the expression of heat shock protei…

0106 biological sciences0301 basic medicineMediterranean climateBlood GlucoseStreZoologyAquatic Science01 natural sciencesPerciformesMesocosm03 medical and health sciencesRandom AllocationBlood ProteinNoise pollutionStress PhysiologicalAnimalsEnvironmental ChemistryHSP70 Heat-Shock ProteinsLactic AcidDamselfishPerciformeHSP70HSP70 Heat-Shock ProteinbiologyNoise pollutionEcologyAnimal010604 marine biology & hydrobiologyAquatic animalGeneral MedicineBlood Proteinsbiology.organism_classificationChromis chromisHsp70Perciformes030104 developmental biologyBloodChromis chromiNoise
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Benefits of immune protection versus immunopathology costs: a synthesis from cytokine KO models.

2017

5 pages; International audience; The inflammatory response can produce damage to host tissues and in several infectious diseases the most severe symptoms are due to immunopathology rather than a direct effect of pathogen multiplication. One hypothesis for the persistence of inflammatory damage posits that the benefits of protection towards infection outweigh the costs. We used data on knocked-out (KO) cytokine models [and the corresponding wild-type (WT) controls] to test this hypothesis. We computed differences in pathogen load and host survival between WT and KO and divided them by the WT values. Using this ratio provides an internal control for variation in pathogen species, host strain,…

0106 biological sciences0301 basic medicineMicrobiology (medical)medicine.medical_treatmentVirulenceInflammationImmunopathologyBiologyCommunicable Diseases010603 evolutionary biology01 natural sciencesMicrobiologyPersistence (computer science)Gene Knockout Techniques03 medical and health sciencesImmunopathologyGeneticsmedicine[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsHumans[ SDV.IMM ] Life Sciences [q-bio]/ImmunologyMolecular BiologyPathogenCytokineEcology Evolution Behavior and SystematicsInflammationVirulenceHost (biology)Immune protectionHost survivalComputational BiologyPathogen loadDisease Models Animal030104 developmental biologyInfectious DiseasesCytokineHost-Pathogen InteractionsImmunologyCytokinesmedicine.symptom
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The Nonbilayer Lipid MGDG and the Major Light-Harvesting Complex (LHCII) Promote Membrane Stacking in Supported Lipid Bilayers.

2018

The thylakoid membrane of algae and land plants is characterized by its intricate architecture, comprising tightly appressed membrane stacks termed grana. The contributions of individual components to grana stack formation are not yet fully elucidated. As an in vitro model, we use supported lipid bilayers made of thylakoid lipid mixtures to study the effect of major light-harvesting complex (LHCII), different lipids, and ions on membrane stacking, seen as elevated structures forming on top of the planar membrane surface in the presence of LHCII protein. These structures were examined by confocal laser scanning microscopy, atomic force microscopy, and fluorescence recovery after photobleachi…

0106 biological sciences0301 basic medicineMicroscopy ConfocalChemistryLipid BilayersStackingLight-Harvesting Protein ComplexesPeasfood and beveragesFluorescence recovery after photobleachingMicroscopy Atomic Force01 natural sciencesBiochemistryLight-harvesting complexDiglycerides03 medical and health sciences030104 developmental biologyGlycolipidMembraneThylakoidConfocal laser scanning microscopyBiophysicslipids (amino acids peptides and proteins)Lipid bilayer010606 plant biology & botanyBiochemistry
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Transcriptome Response of Metallicolous and a Non-Metallicolous Ecotypes of Noccaea goesingensis to Nickel Excess

2020

Root transcriptomic profile was comparatively studied in a serpentine (TM) and a non-metallicolous (NTM) population of Noccaea goesingensis in order to investigate possible features of Ni hyperaccumulation. Both populations were characterised by contrasting Ni tolerance and accumulation capacity. The growth of the TM population was unaffected by metal excess, while the shoot biomass production in the NTM population was significantly lower in the presence of Ni in the culture medium. Nickel concentration was nearly six- and two-fold higher in the shoots than in the roots of the TM and NTM population, respectively. The comparison of root transcriptomes using the RNA-seq method indicated disti…

0106 biological sciences0301 basic medicineNoccaea goesingensisPopulationecotypeschemistry.chemical_elementPlant ScienceBiology01 natural sciencesArticleShoot biomassTranscriptome03 medical and health scienceslcsh:Botanynickel (Ni)BotanyeducationGeneEcology Evolution Behavior and Systematicseducation.field_of_studytoleranceEcologyEcotypeEthylene metabolismlcsh:QK1-989Nickel030104 developmental biologychemistryShoot<i>Noccaea goesingensis</i>transcriptome010606 plant biology & botanyPlants
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