Search results for "combinatorial"

showing 10 items of 1208 documents

The cartesian closed bicategory of generalised species of structures

2007

AbstractThe concept of generalised species of structures between small categories and, correspondingly, that of generalised analytic functor between presheaf categories are introduced. An operation of substitution for generalised species, which is the counterpart to the composition of generalised analytic functors, is also put forward. These definitions encompass most notions of combinatorial species considered in the literature — including of course Joyal's original notion — together with their associated substitution operation. Our first main result exhibits the substitution calculus of generalised species as arising from a Kleisli bicategory for a pseudo-comonad on profunctors. Our secon…

FunctorGeneral MathematicsSubstitution (logic)species of structures analytic functorPresheafComposition (combinatorics)BicategoryMathematics::Algebraic TopologyAlgebraCartesian closed categoryCombinatorial speciesMathematics::Category Theorybicategory cartesian closed categoriesMathematicsJournal of the London Mathematical Society
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How Proximal Nucleobases Regulate the Catalytic Activity of G-Quadruplex/Hemin DNAzymes

2018

International audience; G-quadruplexes (G4s) are versatile catalytic DNAs when combined with hemin. Despite the repertoire of catalytically competent G4/hemin complexes studied so far, little is known about the detailed catalytic mechanism of these biocatalysts. Herein, we have carried out an in-depth analysis of the hemin binding site within the G4/hemin catalysts, providing the porphyrinic cofactor with a controlled nucleotidic environment. We intensively assessed the position-dependent catalytic enhancement in model reactions and found that proximal nucleobases enhance the catalytic ability of the G4/hemin complexes. Our results allow for revisiting the mechanism of the G4/hemin-based ca…

G4-based catalystDNAzymeproximal nucleobasesDeoxyribozyme010402 general chemistryG-quadruplex01 natural sciencesCatalysisCofactorCatalysisNucleobasechemistry.chemical_compoundG4/hemin complexpolycyclic compoundsNucleotideheterocyclic compoundsBinding sitechemistry.chemical_classificationbiology010405 organic chemistryG-quartetGeneral Chemistry[CHIM.CATA]Chemical Sciences/Catalysisequipment and suppliesCombinatorial chemistry0104 chemical scienceschemistrybiology.proteinHemin
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Chloride, carboxylate and carbonate transport by ortho-phenylenediamine-based bisureas

2013

Highly potent but structurally simple transmembrane anion transporters are reported that function at receptor to lipid ratios as low as 1 : 1 000 000. The compounds, based on the simple ortho-phenylenediamine-based bisurea scaffold, have been studied for their ability to facilitate chloride/nitrate and chloride/bicarbonate antiport, and HCl symport processes using a combination of ion selective electrode and fluorescence techniques. In addition, the transmembrane transport of dicarboxylate anions (maleate and fumarate) by the compounds was examined. Molecular dynamics simulations showed that these compounds permeate the membrane more easily than other promising receptors corroborating the e…

GLUTAMATE TRANSPORTERSSTEROID-BASED RECEPTORSAntiporterBicarbonateMOLECULAR RECOGNITIONISOMERIC DICARBOXYLATE ANIONS010402 general chemistry01 natural sciencesChlorideIon selective electrodechemistry.chemical_compoundmedicineOrganic chemistryCarboxylate010405 organic chemistryGeneral ChemistryIN-VITROMembrane transportSELECTIVE DISCRIMINATIONTRANSMEMBRANE ANION TRANSPORTERSCombinatorial chemistryMEMBRANE TRANSPORTERS0104 chemical sciences3. Good healthMembranechemistryCONFORMATIONAL CONTROLINTRACELLULAR PHEffluxmedicine.drug
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From Global Games to Re-contextualized Games: The Design Process of TekMyst

2011

Designing, developing and testing a game for a specific learning context and then achieving positive results, encourages one to deploy it in other environments. We know however that it is not always possible to successfully transfer artifacts from one learning context to the next. In this chapter we explore the principles to be considered when re-contextualizing a game. We base our analysis on the transfer of a Hypercontextualized Game SciMyst (which was designed and developed for the Joensuu Science Festival) into its re-contextualized version TekMyst (for the Helsinki Museum of Technology). Employing a qualitative approach we review the requirements and design decisions at the hand of fou…

Game mechanicsKnowledge managementComputer sciencebusiness.industryCombinatorial game theoryContext (language use)Emergent gameplaybusinessVideo game designGlobal gameTurns rounds and time-keeping systems in gamesRecreational mathematics
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Novel threat-based AI strategies that incorporate adaptive data structures for multi-player board games

2016

This paper considers the problem of designing novel techniques for multi-player game playing, in a range of board games and configurations. Compared to the well-known case of two-player game playing, multi-player game playing is a more complex problem with unique requirements. To address the unique challenges of this domain, we examine the potential of employing techniques inspired by Adaptive Data Structures (ADSs) to rank opponents based on their relative threats, and using this information to achieve gains in move ordering and tree pruning. We name our new technique the Threat-ADS heuristic. We examine the Threat-ADS’ performance within a range of game models, employing a number of diffe…

Game mechanicsNon-cooperative gameSequential gamebusiness.industryComputer scienceNormal-form gameComputingMilieux_PERSONALCOMPUTINGCombinatorial game theory020207 software engineeringScreening game02 engineering and technologyExtensive-form gameWin-win gameGame designArtificial IntelligenceSimulations and games in economics education0202 electrical engineering electronic engineering information engineeringRepeated game020201 artificial intelligence & image processingArtificial intelligencebusinessGame treeMetagamingApplied Intelligence
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Highly potent artemisinin-derived dimers and trimers: Synthesis and evaluation of their antimalarial, antileukemia and antiviral activities

2015

New pharmaceutically active compounds can be obtained by modification of existing drugs to access more effective agents in the wake of drug resistance amongst others. To achieve this goal the concept of hybridization was established during the last decade. We employed this concept by coupling two artemisinin-derived precursors to obtain dimers or trimers with increased in vitro activity against Plasmodiumfalciparum 3D7 strain, leukemia cells (CCRF-CEM and multidrug-resistant subline CEM/ADR5000) and human cytomegalovirus (HCMV). Dimer 4 (IC50 of 2.6 nM) possess superior antimalarial activity compared with its parent compound artesunic acid(3) (IC50 of 9.0 nM). Dimer5 and trimers6 and 7 disp…

GanciclovirStereochemistrymedicine.medical_treatmentDimerClinical BiochemistryPharmaceutical ScienceDihydroartemisininAntiviral AgentsBiochemistryAntimalarialschemistry.chemical_compoundDrug DiscoverymedicineHumansPotencyDoxorubicinArtemisininMolecular BiologyIC50Molecular StructureOrganic ChemistryAntineoplastic Agents PhytogenicCombinatorial chemistryArtemisininsIn vitrochemistryMolecular Medicinemedicine.drugBioorganic & Medicinal Chemistry
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Novel polyaminoacidic copolymers as nonviral gene vectors

2000

Human gene therapy is one of the most promising methods developed in recent years, providing great potential for the treatment of a variety of diseases. Complexes formed between DNA and cationic polymers are attracting increasing attention as novel synthetic vectors for the delivery of genes. We have synthesized polycations with quaternary ammonium groups in their side chains for self-assembly with calf thymus DNA. This paper describes the functionalization of α,β-polyasparthydrazide (PAHy), a synthetic macromolecule having many potential applications in the field of biomedical sciences, with glycidyltrimethylammonuim chloride (GTA) in order to introduce positive charges into their chains. …

Gel electrophoresisPolymers and PlasticsChemistryCationic polymerizationGene deliveryCombinatorial chemistryPolyelectrolytechemistry.chemical_compoundColloid and Surface ChemistryMaterials ChemistryZeta potentialOrganic chemistrySurface chargePhysical and Theoretical ChemistryDNAMacromoleculeColloid & Polymer Science
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BODIPY dyes functionalized with 2-(2-dimethylaminophenyl)ethanol moieties as selective OFF–ON fluorescent chemodosimeters for the nerve agent mimics …

2014

[EN] Two OFF-ON fluorescent chemodosimeters based on a BODIPY core for the detection of nerve agent mimics have been synthesized. Their reactivity towards diethylcyanophosphonate (DCNP) and diisopropylfluorophosphate (DFP) has been tested in organic and aqueous phase. These chemodosimeters selectively detect the nerve agent mimics with good LODs. The chemodosimeters hold their sensing properties on solid supports, allowing the preparation of a hand held sensing kit. The sensing in solid-liquid phase has been demonstrated. The X-ray structure of compound 2 has been resolved.

General Chemical EngineeringBiological Warfare Agentschemistry.chemical_compoundOrganophosphorus HydrolasemedicineOrganic chemistryReactivity (chemistry)Nerve agentEthanolDmmp DetectionQUIMICA INORGANICAOptical-PropertiesAqueous two-phase systemGeneral ChemistryCombinatorial chemistryFluorescenceElectrochemical gas sensorchemistryAcetylcholinesteraseSpectroscopic PropertiesBODIPYPhotonic CrystalBiosensorElectrochemical SensorDerivativesBiosensormedicine.drugRSC Adv.
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3D Ruthenium Nanoparticle Covalent Assemblies from Polymantane Ligands for Confined Catalysis

2020

International audience; The synthesis of metal nanoparticle (NP) assemblies stabilized by functional molecules is an important research topic in nanoscience, and the ability to control interparticle distances and positions in NP assemblies is one of the major challenges in designing and understanding functional nanostructures. Here, two series of functionalized adamantanes, bis-adamantanes, and diamantanes, bearing carboxylic acid or amine functional groups, were used as building blocks to produce, via a straightforward method, networks of ruthenium NPs. Both the nature of the ligand and the Ru/ligand ratio affect the interparticle distance in the assemblies. The use of 1,3-adamantanedicarb…

General Chemical EngineeringCarboxylic acidchemistry.chemical_elementNanoparticle02 engineering and technology010402 general chemistryLigands01 natural sciencesCatalysischemistry.chemical_compound[CHIM.GENI]Chemical Sciences/Chemical engineeringOrganic acidsMaterials ChemistryGénie chimique[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringAminesGénie des procédéschemistry.chemical_classificationCatalystsLigandDecarbonylationGeneral Chemistry021001 nanoscience & nanotechnologyCombinatorial chemistry0104 chemical sciencesRutheniumchemistryPhenylacetyleneMetalsDensity functional theory0210 nano-technology
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Two Decades of Progress in the Asymmetric Intramolecular aza-Michael Reaction.

2021

The asymmetric intramolecular aza-Michael reaction (IMAMR) is a very convenient strategy for the generation of heterocycles bearing nitrogen-substituted stereocenters. Due to the ubiquitous presence of these skeletons in natural products, the IMAMR has found widespread applications in the total synthesis of alkaloids and biologically relevant compounds. The development of asymmetric versions of the IMAMR are quite recent, most of them reported in this century. The fundamental advances in this field involve the use of organocatalysts. Chiral imidazolidinones, diaryl prolinol derivatives, Cinchone-derived primary amines and quaternary ammonium salts, and BINOL-derived phosphoric acids account…

General Chemical EngineeringEnantioselective synthesisTotal synthesisStereoisomerismGeneral ChemistryBiochemistryCombinatorial chemistryStereocenterProlinolchemistry.chemical_compoundAlkaloidschemistryNucleophileIntramolecular forceOrganocatalysisMaterials ChemistryMichael reactionIminesAminesChemical record (New York, N.Y.)
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