Search results for "component"

showing 10 items of 1682 documents

Come rain or come shine: environmental effects on the infective stages of Sparicotyle chrysophrii, a key pathogen in Mediterranean aquaculture

2018

Background Evidence concerning the environmental influence on monogenean transmission and infection processes is widely accepted, although only the effects of a limited number of abiotic factors on particular monogenean species have been explored. The current context of climate change calls for further research both on this subject, and also that concerning monogenean hosts, especially in aquaculture. Methods In this study, four experiments were used to assess the response of the infective stages of Sparicotyle chrysophrii, a pathogenic monogenean from gilthead sea bream (Sparus aurata) cultures in the Mediterranean, to variations of temperature (from 10 °C to 30 °C), pH (7.0 and 7.9), phot…

0301 basic medicineSalinityClimateClimate ChangePhotoperiodZoologyContext (language use)AquacultureBiologylcsh:Infectious and parasitic diseasesFish Diseases03 medical and health sciencesAquacultureSparus aurataAnimalslcsh:RC109-216Abiotic factorsphotoperiodismAbiotic componentLarvapHHatchingbusiness.industryResearchTemperatureAquatic animalSea BreamCircadian RhythmSalinity030104 developmental biologyInfectious DiseasesFree-living stagesParasitologyTrematodaPlatyhelminthesbusinessMonogeneaParasites & Vectors
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Identification of microRNAS differentially regulated by water deficit in relation to mycorrhizal treatment in wheat.

2019

Arbuscular mycorrhizal fungi (AMF) are soil microrganisms that establish symbiosis with plants positively influencing their resistance to abiotic stresses. The aim of this work was to identify wheat miRNAs differentially regulated by water deficit conditions in presence or absence of AMF treatment. Small RNA libraries were constructed for both leaf and root tissues considering four conditions: control (irrigated) or water deficit in presence/absence of mycorrhizal (AMF) treatment. A total of 12 miRNAs were significantly regulated by water deficit in leaves: five in absence and seven in presence of AMF treatment. In roots, three miRNAs were water deficit-modulated in absence of mycorrhizal t…

0301 basic medicineSmall RNABiologyPlant Roots03 medical and health sciences0302 clinical medicineSymbiosisTranscription (biology)Gene Expression Regulation PlantStress PhysiologicalMycorrhizaeBotanymicroRNAGeneticsProtein biosynthesisTranscriptional regulationGene Regulatory NetworksMolecular BiologyDurum wheatWater deficitTriticummiRNAPlant ProteinsAbiotic componentGene Expression ProfilingfungiGene Expression Regulation DevelopmentalGeneral MedicineCell redox homeostasisDroughtsPlant LeavesMicroRNAs030104 developmental biologyRootRNA Plant030220 oncology & carcinogenesisWheatMolecular biology reports
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Variance component analysis to assess protein quantification in biomarker discovery. Application to MALDI-TOF mass spectrometry.

2017

International audience; Controlling the technological variability on an analytical chain is critical for biomarker discovery. The sources of technological variability should be modeled, which calls for specific experimental design, signal processing, and statistical analysis. Furthermore, with unbalanced data, the various components of variability cannot be estimated with the sequential or adjusted sums of squares of usual software programs. We propose a novel approach to variance component analysis with application to the matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) technology and use this approach for protein quantification by a classical signal processing algori…

0301 basic medicineStatistics and ProbabilityMALDI-TOFexperimental designBiometryprotein quantificationQuantitative proteomicsVariance component analysis[ CHIM ] Chemical Sciences01 natural sciencesSignaltechnological variability010104 statistics & probability03 medical and health sciencesstatistical analysis[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing[CHIM.ANAL]Chemical Sciences/Analytical chemistryComponent (UML)[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]biomarker discoverysum of squares type0101 mathematicsBiomarker discoverysignal processingMathematicsSignal processingAnalysis of Variance[ PHYS ] Physics [physics]Noise (signal processing)ProteinsGeneral MedicineVariance (accounting)[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]030104 developmental biologySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationLinear Modelsvariance components[ CHIM.ANAL ] Chemical Sciences/Analytical chemistryStatistics Probability and UncertaintyBiological systemAlgorithmsBiomarkersBiometrical journal. Biometrische Zeitschrift
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Role of the antioxidant defence system and telomerase in arsenic-induced genomic instability

2016

Arsenic (AS) is a reactive oxygen species (ROS)-inducer carcinogen, whose mode of action is still unclear. To defend against ROS, cells use enzymatic and non-enzymatic antioxidants, such as superoxide dismutase (SOD) and catalase. Failure of antioxidant systems (AXS) can result in dicentric chromosomes formation as well as telomere associations for the reduced activity of telomerase. In order to clarify the long-term effects of a past AS exposure, we evaluated the efficiency of the AXS and the telomerase activity in the progeny of arsenite-treated cells named ASO (arsenic shake-off) cells, previously obtained from arsenite-treated V79 cells and selected by shake-off. Despite SOD1 expression…

0301 basic medicineTelomeraseArsenitesHealth Toxicology and MutagenesisClone (cell biology)ToxicologyAntioxidantsGenomic InstabilitySuperoxide dismutase03 medical and health sciencesTelomerase RNA componentCricetulus0302 clinical medicineGeneticsAnimalsTelomerase reverse transcriptaseArsenic Genomic instability Antioxidant defense system SOD CAT Telomerase.TelomeraseGenetics (clinical)chemistry.chemical_classificationReactive oxygen speciesbiologySuperoxide DismutaseCatalaseMolecular biologyTelomereSettore BIO/18 - Genetica030104 developmental biologyGene Expression RegulationchemistryCatalase030220 oncology & carcinogenesisbiology.proteinReactive Oxygen SpeciesMutagenesis
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Phenolic Compounds in Extra Virgin Olive Oil Stimulate Human Osteoblastic Cell Proliferation.

2016

In this study, we aimed to clarify the effects of phenolic compounds and extracts from different extra virgin olive oil (EVOO) varieties obtained from fruits of different ripening stages on osteoblast cells (MG-63) proliferation. Cell proliferation was increased by hydroxytyrosol, luteolin, apigenin, p-coumaric, caffeic, and ferulic acids by approximately 11-16%, as compared with controls that were treated with one vehicle alone, while (+)-pinoresinol, oleuropein, sinapic, vanillic acid and derivative (vanillin) did not affect cell proliferation. All phenolic extracts stimulated MG-63 cell growth, and they induced higher cell proliferation rates than individual compounds. The most effective…

0301 basic medicineTime Factorslcsh:MedicineBiochemistryMass SpectrometryTreeschemistry.chemical_compoundAnimal CellsPlant ProductsMedicine and Health SciencesCaffeic acidApigeninlcsh:ScienceLuteolinChromatography High Pressure LiquidConnective Tissue CellsCultured Tumor CellsPrincipal Component AnalysisMultidisciplinaryAgricultureCell DifferentiationRipeningPlantsPhenylethyl AlcoholLipidsOsteoblast DifferentiationChemistryBiochemistryCell ProcessesConnective TissuePhysical SciencesApigeninBiological CulturesCellular TypesAnatomyResearch ArticleOlive TreesCoumaric AcidsResearch and Analysis MethodsVegetable Oils03 medical and health sciencesCaffeic AcidsPhenolsOleuropeinCell Line TumorOleaVanillic acidHumansPhenolsOlive OilCell ProliferationAnalysis of Variance030109 nutrition & dieteticsOsteoblastsDose-Response Relationship Druglcsh:RChemical CompoundsOrganismsBiology and Life SciencesCell BiologyCell CulturesOsteosarcoma CellsAgronomyOlive treesBiological Tissue030104 developmental biologychemistryFruitHydroxytyrosollcsh:QOilsCrop ScienceDevelopmental Biology
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Transfer Free Energies of Test Proteins Into Crowded Protein Solutions Have Simple Dependence on Crowder Concentration

2019

The effects of macromolecular crowding on the thermodynamic properties of test proteins are determined by the latter's transfer free energies from a dilute solution to a crowded solution. The transfer free energies in turn are determined by effective protein-crowder interactions. When these interactions are modeled at the all-atom level, the transfer free energies may defy simple predictions. Here we investigated the dependence of the transfer free energy (Δμ) on crowder concentration. We represented both the test protein and the crowder proteins atomistically, and used a general interaction potential consisting of hard-core repulsion, non-polar attraction, and solvent-screened electrostati…

0301 basic medicineWork (thermodynamics)macromolecular crowdingThermodynamicsBiochemistry Genetics and Molecular Biology (miscellaneous)Biochemistrytransfer free energy03 medical and health sciences0302 clinical medicinecrowder concentrationMolecular Bioscienceslcsh:QH301-705.5Molecular BiologyOriginal ResearchPhysicsComponent (thermodynamics)Electrostatics030104 developmental biologylcsh:Biology (General)Virial coefficient030220 oncology & carcinogenesisExcluded volumeexcluded-volumeVirial expansionProtein foldingMacromolecular crowdingsoft attractionFrontiers in Molecular Biosciences
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Peaks of in situ N2O emissions are influenced by N2O producing and reducing microbial communities across arable soils

2018

International audience; Introduction Agriculture is the main source of terrestrial N2O emissions, a potent greenhouse gas and the main cause of ozone depletion ((Hu et al., 2015). The reduction of N2O into N2 by microorganisms carrying the nitrous oxide reductase gene (nosZ) is the only known biological process eliminating this greenhouse gas. Recent studies showed that a previously unknown clade of N2O-reducers (nosZII) was related to the potential capacity of the soil to act as a N2O sink (see Hallin et al., 2017 and references therein). However little is known about how this group responds to different agricultural practices. Here, we investigated how N2O-producers and N2O-reducers were …

0301 basic medicine[SDE] Environmental SciencesDenitrification[SDV]Life Sciences [q-bio]Biologie du sol[SHS]Humanities and Social Sciencesnitrogen cyclingF01 - Culture des plantes[SDV.BV] Life Sciences [q-bio]/Vegetal Biologyhttp://aims.fao.org/aos/agrovoc/c_34841General Environmental Science2. Zero hungerAbiotic componentGlobal and Planetary ChangeBiotic componentdenitrificationEcologyEcologyNitrification[SDV] Life Sciences [q-bio]greenhouse gasCycle de l'azote[SDE]Environmental Sciencestillage[SHS] Humanities and Social SciencesArable landGaz à effet de serreP33 - Chimie et physique du solagroecosystemsP40 - Météorologie et climatologie030106 microbiologyhttp://aims.fao.org/aos/agrovoc/c_2793803 medical and health sciencesland-useEnvironmental Chemistryhttp://aims.fao.org/aos/agrovoc/c_12834[SDV.BV]Life Sciences [q-bio]/Vegetal Biologyhttp://aims.fao.org/aos/agrovoc/c_1666Nitrogen cycleChangement climatique[ SDV ] Life Sciences [q-bio]http://aims.fao.org/aos/agrovoc/c_7160P34 - Biologie du sol15. Life on landequipment and suppliesagroecosystems;nitrogen cycling;land-use;tillage;denitrification;nitrification;microbial diversity;greenhouse gasAgronomy13. Climate actionGreenhouse gasmicrobial diversitySoil waterEnvironmental scienceNitrification
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LBA-06 IMAB362: a novel immunotherapeutic antibody targeting the tight-junction protein component CLAUDIN18.2 in gastric cancer

2016

0301 basic medicinebiologyTight junctionbusiness.industryCancerHematologymedicine.disease03 medical and health sciences030104 developmental biology0302 clinical medicineOncology030220 oncology & carcinogenesisComponent (UML)Antibody targetingbiology.proteinCancer researchmedicineAntibodybusinessAnnals of Oncology
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Revealing the relationship between vegetable oil composition and oxidative stability: A multifactorial approach

2018

Abstract A detailed composition analysis was performed for 22 diverse oils and fats and included determination of tocopherols (α, γ and δ), β-carotene, chlorophyll, total phenolic compounds (TPC) and fatty acid (FA) composition, as well as the determination of their oxidative stability (Rancimat test). Principal components analysis was applied to obtain an overview of the sample variations and to identify behavioural patterns. Linear regression correlations and a multiple linear regression model were performed to quantify the relationship between the composition of oils and fats and their oxidative stability. The TPC and saturated FA were the main individual factors that correlated positive…

0301 basic medicinechemistry.chemical_classification030109 nutrition & dieteticsFatty acidFood composition dataRegression analysis04 agricultural and veterinary sciences040401 food science03 medical and health scienceschemistry.chemical_compound0404 agricultural biotechnologyVegetable oilchemistryChlorophyllLinear regressionPrincipal component analysisComposition (visual arts)Food scienceFood ScienceJournal of Food Composition and Analysis
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Component-Resolved Diagnosis of American Cockroach (Periplaneta americana) Allergy in Patients From Different Geographical Areas

2021

Background:Manifestation of respiratory allergy to American cockroach (Periplaneta americana) is prominent in the subtropical and tropical areas. However, co-existing perennial indoor inhalant allergies frequently compromise clinical diagnosis of cockroach allergy, and the analysis of sensitization pattern is limited by the lack ofPeriplanetaallergens widely available for component-resolved diagnostics (CRD).Objective:To evaluate a collection of previously described recombinantPeriplanetaallergens for CRD in cockroach allergy.Methods:A panel of nine recombinantPeriplaneta allergens (Per a 1–5, 7–10) was generated, purified, and subjected to physicochemical characterization by applying circu…

0301 basic medicinecomponent-resolved diagnosisAllergyanimal structuresPeriplaneta americana (Insecta)medicine.disease_causeAmerican cockroachMicrobiology03 medical and health sciences0302 clinical medicineAllergenimmune system diseasesbiology.animalmedicineIn patientSensitizationCockroachbiologyGeneral MedicineRC581-607biology.organism_classificationmedicine.diseaserespiratory tract diseasesBlattella germanica030104 developmental biologymedicine.anatomical_structure030228 respiratory systemCockroach allergycockroach allergyImmunologic diseases. AllergyAmerican cockroachAmerican cockroach ; Blattella germanica ; component-resolved diagnosis ; cockroach allergy ; Periplaneta americana (Insecta) ; InsektenallergiePeriplanetaFrontiers in Allergy
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