Search results for "development."

showing 10 items of 26708 documents

In vivo photoprotection mechanisms observed from leaf spectral absorbance changes showing VIS–NIR slow-induced conformational pigment bed changes

2019

Abstract Regulated heat dissipation under excessive light comprises a complexity of mechanisms, whereby the supramolecular light-harvesting pigment–protein complex (LHC) shifts state from light harvesting towards heat dissipation, quenching the excess of photo-induced excitation energy in a non-photochemical way. Based on whole-leaf spectroscopy measuring upward and downward spectral radiance fluxes, we studied spectrally contiguous (hyperspectral) transient time series of absorbance A(λ,t) and passively induced chlorophyll fluorescence F(λ,t) dynamics of intact leaves in the visible and near-infrared wavelengths (VIS–NIR, 400–800 nm) after sudden strong natural-like illumination exposure. …

0106 biological sciences0301 basic medicineChlorophyllMaterials sciencePassive chlorophyll a fluorescencePigment–protein dynamicsLightHyperspectral remote sensingAnalytical chemistryJuglansPlant Science01 natural sciencesBiochemistryEnergy quenchingFluorescenceAbsorbance03 medical and health sciencesTransmittanceFiber Optic TechnologySpectroscopyChlorophyll fluorescencechemistry.chemical_classificationSpectroscopy Near-InfraredAbsorbed photosynthetic active radiation (APAR)Non-photochemical quenching (NPQ)Cell BiologyGeneral MedicineEquipment DesignPigments BiologicalPhotochemical ProcessesCarotenoidsPlant LeavesWavelength030104 developmental biologychemistryXanthophyllRadianceOriginal ArticleAbsorbance shiftMorusControlled heat dissipation010606 plant biology & botanyPhotosynthesis Research
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Synthetic conversion of leaf chloroplasts into carotenoid-rich plastids reveals mechanistic basis of natural chromoplast development

2020

Plastids, the defining organelles of plant cells, undergo physiological and morphological changes to fulfill distinct biological functions. In particular, the differentiation of chloroplasts into chromoplasts results in an enhanced storage capacity for carotenoids with industrial and nutritional value such as beta-carotene (provitamin A). Here, we show that synthetically inducing a burst in the production of phytoene, the first committed intermediate of the carotenoid pathway, elicits an artificial chloroplast-to-chromoplast differentiation in leaves. Phytoene overproduction initially interferes with photosynthesis, acting as a metabolic threshold switch mechanism that weakens chloroplast i…

0106 biological sciences0301 basic medicineChloroplastsNuclear gene[SDV]Life Sciences [q-bio]ArabidopsisProtein EngineeringPhotosynthesis01 natural sciences03 medical and health scienceschemistry.chemical_compoundPhytoeneTobaccoChromoplast[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPlastidsPlastidCarotenoidComputingMilieux_MISCELLANEOUSPlant Proteinschemistry.chemical_classificationCarotenoidPhytoeneMultidisciplinarySyntheticfood and beveragesCell DifferentiationChromoplastBiological Sciencesbeta CarotenePlant cellCarotenoidsCell biology02.- Poner fin al hambre conseguir la seguridad alimentaria y una mejor nutrición y promover la agricultura sosteniblePlant LeavesChloroplastGENETICA030104 developmental biologychemistryDifferentiationChromoplat010606 plant biology & botanyProceedings of the National Academy of Sciences
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Chloroplast genomes of Rubiaceae: Comparative genomics and molecular phylogeny in subfamily Ixoroideae.

2020

In Rubiaceae phylogenetics, the number of markers often proved a limitation with authors failing to provide well-supported trees at tribal and generic levels. A robust phylogeny is a prerequisite to study the evolutionary patterns of traits at different taxonomic levels. Advances in next-generation sequencing technologies have revolutionized biology by providing, at reduced cost, huge amounts of data for an increased number of species. Due to their highly conserved structure, generally recombination-free, and mostly uniparental inheritance, chloroplast DNA sequences have long been used as choice markers for plant phylogeny reconstruction. The main objectives of this study are: 1) to gain in…

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesCoffeaRubiaceaePlant SciencePlant Genetics01 natural sciencesGenomePlant GenomicsPlastidsGenome EvolutionPhylogenyData ManagementMultidisciplinaryIxoroideaeQDNA ChloroplastRHigh-Throughput Nucleotide Sequencingfood and beveragesPhylogenetic AnalysisGenomicsPhylogeneticsChloroplast DNAEngineering and TechnologyMedicineGenome PlantResearch ArticleBiotechnologyGenome evolutionComputer and Information SciencesNuclear genePlant Cell BiologyScienceGenomicsBioengineeringBiology010603 evolutionary biologyPolymorphism Single NucleotideMolecular EvolutionEvolution Molecular03 medical and health sciencesChloroplast GenomeGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyComparative genomicsEvolutionary BiologyBiology and Life SciencesComputational BiologyCell BiologySequence Analysis DNAComparative Genomicsbiology.organism_classificationGenome AnalysisGenomic Libraries030104 developmental biologyEvolutionary biologyPlant BiotechnologyReference genomePLoS ONE
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Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.

2018

International audience; Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of conservation in plants. Whole chloroplast genomes can now be readily obtained for plant species using new sequencing methods, giving invaluable data for plant evolution However new annotation methods are required for the efficient analysis of this data to deliver high quality phylogenetic analyses. In this study, the two main tools for chloroplast genome annotation were compared. More consistent detection and annotation of genes were produced with GeSeq when compared to the currently used Dogma. This suggests that the annotation of most of the previously annotated chloroplast …

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesPlant SciencePlant Genetics01 natural sciencesGenomeCoffeeDatabase and Informatics MethodsPlant GenomicsPlastidsPhylogenyData Management2. Zero hungerPlant evolutionMultidisciplinarybiologyPhylogenetic treeQRfood and beveragesPhylogenetic AnalysisGenome projectGenomicsPhylogenetics[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]MedicineEngineering and Technology[INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Cellular Structures and OrganellesCellular TypesSequence AnalysisResearch ArticleBiotechnologyComputer and Information SciencesBioinformaticsSciencePlant Cell BiologyBioengineering[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]Coffea canephoraGenes PlantResearch and Analysis Methods010603 evolutionary biology[INFO.INFO-IU]Computer Science [cs]/Ubiquitous ComputingEvolution Molecular[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]03 medical and health sciencesPhylogeneticsChloroplast GenomePlant CellsGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyEvolutionary BiologyCoffea arabicaCoffeafungiBiology and Life SciencesComputational BiologyMolecular Sequence AnnotationSequence Analysis DNACell Biology15. Life on landbiology.organism_classificationGenome Analysis[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationGenome Annotation030104 developmental biologyEvolutionary biology[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET]Plant BiotechnologySequence AlignmentPloS one
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The problem of misidentification between edible and poisonous wild plants: Reports from the Mediterranean area

2018

Abstract Today, in many European countries, people are looking for wild edible plants to experience new tastes and flavors, by following the new trend of being green and environmentally friendly. Young borage and spinach leaves can be easily confused by inexpert pickers with those of other plants, including poisonous ones, such as Mandragora autumnalis Bertol. (mandrake) or Digitalis purpurea L. (foxglove), common in southern and northern Italy respectively. In the last twenty years, several cases of intoxication by accidental ingestion of mandrake and foxglove have been reported. The purpose of this work was to perform a pharmacognostic characterization of young leaves from borage, mandrak…

0106 biological sciences0301 basic medicineChromatography GasDigitalis GlycosidePhytochemicalsIntoxicationBiologyPhytochemicalToxicology010603 evolutionary biology01 natural sciencesEdible plantGas Chromatography-Mass SpectrometryAccidental ingestion03 medical and health sciencesPlant leaveAlkaloidsAlkaloidHumansDiscriminant analysePoisonous plants Edible plants Plant leaves Accidental ingestion Intoxication Discriminant analysesBorageTraditional medicineMediterranean RegionSettore BIO/02 - Botanica SistematicaDigitalis purpureafood and beveragesMandragora autumnalisDigitalis GlycosidesDiscriminant analysesGeneral MedicineMandrakebiology.organism_classificationPoisonous plantPlant LeavesPlants Toxic030104 developmental biologyPhytochemicalItalyChromatography GaPoisonous plantsSettore BIO/03 - Botanica Ambientale E ApplicataAccidental ingestionEdible plantsEdible plantsMediterranean areaPlants EdibleFood ScienceHuman
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Evolution of the human chromosome 13 synteny: Evolutionary rearrangements, plasticity, human disease genes and cancer breakpoints

2020

The history of each human chromosome can be studied through comparative cytogenetic approaches in mammals which permit the identification of human chromosomal homologies and rearrangements between species. Comparative banding, chromosome painting, Bacterial Artificial Chromosome (BAC) mapping and genome data permit researchers to formulate hypotheses about ancestral chromosome forms. Human chromosome 13 has been previously shown to be conserved as a single syntenic element in the Ancestral Primate Karyotype

0106 biological sciences0301 basic medicineChromosomes Artificial Bacteriallcsh:QH426-470PlasticityEvolutionContext (language use)BiologyBAC probeSettore BIO/08 - AntropologiaSynteny010603 evolutionary biology01 natural sciencesGenomeArticleEvolution Molecular03 medical and health sciencesPaintingBAC probesFISHNeoplasmsGeneticsAnimalsHumansPhylogenyGenetics (clinical)Chromosome 13SyntenyGene RearrangementMammalsBacterial artificial chromosomeAutosomeChromosomes Human Pair 13Chromosome MappingChromosomeKaryotypelcsh:Genetics030104 developmental biologyEvolutionary biologyHuman synteny
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Daily rhythmicity of high affinity copper transport

2016

A differential demand for copper (Cu) of essential cupro-proteins that act within the mitochondrial and chloroplastal electronic transport chains occurs along the daily light/dark cycles. This requires a fine-tuned spatiotemporal regulation of Cu delivery, becoming especially relevant under non-optimal growth conditions. When scarce, Cu is imported through plasma membrane-bound high affinity Cu transporters (COPTs) whose coding genes are transcriptionally induced by the SPL7 transcription factor. Temporal homeostatic mechanisms are evidenced by the presence of multiple light- and clock-responsive regulatory cis elements in the promoters of both SPL7 and its COPT targets. A model is presente…

0106 biological sciences0301 basic medicineCircadian clockArabidopsisComputingMilieux_LEGALASPECTSOFCOMPUTINGPlant Science01 natural sciencesElectron Transport03 medical and health sciencesGene Expression Regulation PlantArabidopsisBotanyRNA MessengerSLC31 ProteinsPromoter Regions GeneticCation Transport ProteinsTranscription factorbiologyArabidopsis ProteinsGiganteaTransporterPromoterbiology.organism_classificationElectron transport chainArticle AddendumCircadian RhythmTransport proteinDNA-Binding Proteins030104 developmental biologyBiophysicsCopperMetabolic Networks and PathwaysTranscription Factors010606 plant biology & botanyPlant Signaling & Behavior
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Gibberellin reactivates and maintains ovary-wall cell division causing fruit set in parthenocarpic Citrus species

2016

[EN] Citrus is a wide genus in which most of the cultivated species and cultivars are natural parthenocarpic mutants or hybrids (i.e. orange, mandarin, tangerine, grapefruit). The autonomous increase in GA(1) ovary concentration during anthesis was suggested as being the stimulus responsible for parthenocarpy in Citrus regardless of the species. To determine the exact GA-role in parthenocarpic fruit set, the following hypothesis was tested: GA triggers and maintains cell division in ovary walls causing fruit set. Obligate and facultative parthenocarpic Citrus species were used as a model system because obligate parthenocarpic Citrus sp (i.e. Citrus unshiu) have higher GA levels and better n…

0106 biological sciences0301 basic medicineCitrusCell divisionFruit setCitruFlowersPlant ScienceOrange (colour)BiologyParthenocarpy01 natural sciencesPaclobutrazol03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsGeneticAnthesisCell WallGene Expression Regulation PlantBotanyPRODUCCION VEGETALGeneticsGibberellinPhylogenyFruit treePlant Growth Regulatorfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classificationGibberellinsUp-RegulationCitrus unshiu030104 developmental biologychemistryFlowerFruitMicroscopy Electron ScanningParthenocarpyGibberellinAgronomy and Crop ScienceCell DivisionFruit tree010606 plant biology & botanyPlant Science
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Marine protected areas rescue a sexually selected trait in European lobster

2020

Abstract Marine protected areas (MPAs) are increasingly implemented worldwide to maintain and restore depleted populations. However, despite our knowledge on the myriad of positive responses to protection, there are few empirical studies on the ability to conserve species’ mating patterns and secondary sexual traits. In male European lobsters (Homarus gammarus), the size of claws relative to body size correlates positively with male mating success and is presumably under sexual selection. At the same time, an intensive trap fishery exerts selection against large claws in males. MPAs could therefore be expected to resolve these conflicting selective pressures and preserve males with large cl…

0106 biological sciences0301 basic medicineClawanimal structuresmedia_common.quotation_subjectlcsh:Evolution010603 evolutionary biology01 natural sciencesCompetition (biology)secondary sexual trait03 medical and health sciencesHomarus gammaruslcsh:QH359-425Geneticssexual selectionclawsHomarus gammarusMatingVDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920Ecology Evolution Behavior and Systematicsmedia_commonbiologyselective harvestingfungiMarine reservefisheries‐induced evolutionmarine reservesVDP::Matematikk og Naturvitenskap: 400Original Articlesbiology.organism_classificationMating systemFishery030104 developmental biologySexual selectiontrap fisheriesOriginal ArticleMarine protected areaGeneral Agricultural and Biological SciencesEvolutionary Applications
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Microspore Embryogenesis Through Anther Culture in Citrus clementina Hort. ex Tan.

2016

Anther culture is a biotechnological method that allows to obtain, in one step, homozygous plants, very important to plant breeding, due to their numerous applications in mutation research, selection, genome sequencing, genetic analysis, and transformation. To induce the microspores, i.e., the immature male gametes, to switch from the normal gametophytic pathway to the sporophytic one, it is necessary to submit them to a type of stress, such as high or low temperature, starvation, or magnetic field. Stress can be applied to the donor plants and/or the fl oral buds or the anthers or the isolated microspores, before or during the culture. In this chapter, the protocol to induce gametic embryo…

0106 biological sciences0301 basic medicineClementineAnther cultureCitruStamenMicrospore embryogenesiPlant DevelopmentGerminationBreedingHaploidyBiologymedicine.disease_cause01 natural sciencesGenetic analysis03 medical and health sciencesMicrosporePollenBotanyGeneticsmedicinePlant breedingCultivarMolecular BiologyPlant Somatic Embryogenesis TechniqueSomatic embryogenesifungiEmbryogenesisGametic embryogenesifood and beveragesSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeTransformation (genetics)030104 developmental biologyIsolated microspore cultureDoubled haploidPollenTissue Culture TechniqueGenome Plant010606 plant biology & botany
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