Search results for "fluidit"

showing 10 items of 239 documents

Dynamics of surface of lipid membranes: theoretical considerations and the ESR experiment.

2016

The effect of the surface layer of model membranes on their physical properties was discussed in this paper. The research involved a physical ESR experiment with the use of spin probes and computer simulation based on the Monte Carlo technique. Liposomes formed during the process of sonication of lecithin were scanned in an ESR spectrometer. The membrane surface layer model, represented by the system of electric dipoles arranged in rectangular or hexagonal matrices, was studied. The final states of computer simulations were presented as textures. It was found that in the gel phase some ordered domain structures are formed, while in the liquid–crystal phase we got complex textures comprising…

Models MolecularPhase transition12-DipalmitoylphosphatidylcholineSurface PropertiesMonte Carlo methodBiophysicsAnalytical chemistryMolecular Conformation02 engineering and technologyPhase Transition03 medical and health sciencesSonication0302 clinical medicinePhase (matter)Lipid membraneSurface layerMembrane fluidityLipid bilayerMonte Carlo simulationChemistryCell MembraneElectron Spin Resonance SpectroscopyTemperatureGeneral MedicineHydrogen-Ion ConcentrationESR probe021001 nanoscience & nanotechnologyElectric dipole momentDipoleKineticsMembraneChemical physics030220 oncology & carcinogenesisLiposomesOriginal Article0210 nano-technologyMonte Carlo MethodEuropean biophysics journal : EBJ
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Molecular modelling study of the role of cholesterol in the stimulation of the oxytocin receptor.

2001

Cholesterol, an integral component of membranes in Eucaryota, is a modifier of membrane properties. In vivo studies have demonstrated that cholesterol can also modulate activities of some G protein-coupled receptors (GPCRs), which are integral membrane proteins. This can result either from an effect of cholesterol on the membrane fluidity or from specific interactions of the membrane cholesterol with the receptor, as recently demonstrated for the cholecystokinin type beta (CCKRbeta) or the oxytocin receptor (OTR). Using molecular modelling, we studied conformational preferences of cholesterol and several of its analogues. Subsequently, we simulated the distributions of their preferred confo…

Models MolecularSequence Homology Amino AcidProtein ConformationMolecular Sequence DataBiologyCholecystokinin receptorOxytocin receptorGeneral Biochemistry Genetics and Molecular BiologySterolSterolsCholesterolBiochemistryReceptors OxytocinMutationBiophysicsMembrane fluidityHumansAmino Acid SequenceReceptorCholecystokininIntegral membrane proteinhormones hormone substitutes and hormone antagonistsCholecystokininG protein-coupled receptorProtein BindingActa biochimica Polonica
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Superfluid density and quasi-long-range order in the one-dimensional disordered Bose–Hubbard model

2015

We study the equilibrium properties of the one-dimensional disordered Bose-Hubbard model by means of a gauge-adaptive tree tensor network variational method suitable for systems with periodic boundary conditions. We compute the superfluid stiffness and superfluid correlations close to the superfluid to glass transition line, obtaining accurate locations of the critical points. By studying the statistics of the exponent of the power-law decay of the correlation, we determine the boundary between the superfluid region and the Bose glass phase in the regime of strong disorder and in the weakly interacting region, not explored numerically before. In the former case our simulations are in agreem…

Monte Carlo methodGeneral Physics and AstronomyBoundary (topology)FOS: Physical sciencesBose–Hubbard model01 natural sciencesCondensed Matter::Disordered Systems and Neural Networks010305 fluids & plasmasSuperfluidityPhysics and Astronomy (all)Bose glass; disorder-driven phase transition; numerical simulation of quantum many-body systems; Physics and Astronomy (all)0103 physical sciencesnumerical simulation of quantum many-body systemsPeriodic boundary conditionsTensor010306 general physicsPhysicsCondensed Matter::Quantum GasesQuantum PhysicsCondensed matter physicsdisorder-driven phase transitionCondensed Matter::OtherBose glassDisordered Systems and Neural Networks (cond-mat.dis-nn)Condensed Matter - Disordered Systems and Neural Networks16. Peace & justiceVariational methodExponentQuantum Physics (quant-ph)
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Multicomponent relativistic dissipative fluid dynamics from the Boltzmann equation

2022

We derive multicomponent relativistic second-order dissipative fluid dynamics from the Boltzmann equations for a reactive mixture of $N_{\text{spec}}$ particle species with $N_q$ intrinsic quantum numbers (e.g. electric charge, baryon number, and strangeness) using the method of moments. We obtain the continuity equations for multiple conserved charges as well as the conservation equations for the total energy and momentum in the single-fluid approximation. These $4+N_q$ conservation laws are closed by deriving the second-order equations of motion for the dissipative quantities in the $(10+4N_q)$-moment approximation. The resulting fluid-dynamical equations are formally similar to those of …

Nuclear Theory (nucl-th)mallintaminenHigh Energy Physics - PhenomenologyHigh Energy Physics - Phenomenology (hep-ph)Nuclear TheoryFluid Dynamics (physics.flu-dyn)fluiditFOS: Physical sciencesPhysics - Fluid Dynamicshiukkasfysiikkavahva vuorovaikutus
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The dynamics of the surface layer of lipid membranes doped by vanadium complex: computer modeling and EPR studies

2015

Abstract Penetration of the liposome membranes doped with vanadium complex formed in the liquid-crystalline phase from egg yolk lecithin (EYL) by the TEMPO (2,2,6,6-tetramethylpiperidine-1-oxyl) spin probes has been investigated. The penetration process was followed by 360 hours at 24°C, using the electron spin resonance (EPR) method. The spectroscopic parameter of the partition (F) of this probe indicated that a maximum rigidity of the membrane was at 3% concentration of the vanadium complex. Computer simulations showed that the increase in the rigidity of the membrane corresponds to the closure of gaps in the surface layer of the membrane, and indicates the essential role of the membrane …

Nuclear and High Energy PhysicsScienceDopingmembrane fluidityQAnalytical chemistryVanadiumchemistry.chemical_elementmonte carlo simulationCondensed Matter Physicslaw.inventionMembraneNuclear Energy and EngineeringchemistryChemical engineeringlawepr probeMembrane fluiditySurface layerlipid membraneSafety Risk Reliability and QualityElectron paramagnetic resonanceLipid bilayerWaste Management and DisposalInstrumentationNukleonika
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The stability and functional properties of proteoliposomes mixed with dextran derivatives bearing hydrophobic anchor groups

1992

Liposomes composed of Escherichia coli phospholipid were coated with polysaccharides bearing hydrophobic palmitoyl anchors. The effect on the stability of liposomes without or with integral membrane proteins was investigated. A high concentration of hydrophobized dextrans protected the liposomes against detergent degradation, decreased the fluidity of the membranes, prevented fusion of the liposomes and enhanced their stability. Proteoliposomes containing beef heart cytochrome-c oxidase and the lactose transport carrier of E. coli were similarly affected by coating with the dextrans. Under these conditions both membrane proteins were still active. Long-term stability of the coated liposomes…

PROTEINMembrane FusionBiochemistryMembrane Potentialschemistry.chemical_compoundFUSIONINTEGRAL MEMBRANE PROTEINBINDINGIntegral membrane proteinLiposomeSymportersEscherichia coli ProteinsVesiclePROTEOLIPOSOMEDextransDEXTRAN DERIVATIVEBIOLOGICAL-MEMBRANESFluoresceinsMembraneCarbohydrate SequenceESCHERICHIA-COLIMonosaccharide Transport ProteinsCations DivalentMembrane FluidityProteolipidsMolecular Sequence DataBiophysicsPhospholipidFluorescence PolarizationLactose transportOXIDASECYTOCHROME-CVESICLESElectron Transport Complex IVHYDROPHOBIC ANCHOR GROUPEscherichia coliAnimalsKINETICSChromatographyMyocardiumMembrane ProteinsMembrane Transport ProteinsBiological membraneCell BiologyPROTON-MOTIVE FORCEMembrane proteinchemistryLiposomesCalciumCattleBiochimica et Biophysica Acta (BBA) - Biomembranes
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Thermal Expansion of Microstructured DMPC Bilayers Quantified by Temperature-Controlled Atomic Force Microscopy

2006

Phase transitionMembrane FluiditySurface PropertiesLipid BilayersBiophysicsAnalytical chemistryPhospholipidMicroscopy Atomic ForcePhase TransitionThermal expansionchemistry.chemical_compoundAdsorptionMembrane fluidityPhysical and Theoretical ChemistryLipid bilayerAtomic force microscopyBilayerTemperatureProteinsLipidsAtomic and Molecular Physics and OpticsModels ChemicalchemistryChemical physicsAdsorptionDimyristoylphosphatidylcholinePeptidesChemPhysChem
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Quasiclassical free energy of superconductors : Disorder-driven first-order phase transition in superconductor/ferromagnetic-insulator bilayers

2020

In the seminal work by G. Eilenberger, Z. Phys. 214, 195 (1968), a closed-form expression for the free energy of inhomogeneous spin-singlet superconductor in terms of quasiclassical propagators has been suggested. However, deriving this expression and generalizing it for superconductors or superfluids with general matrix structure, e.g., spin-triplet correlations, has remained problematic. Starting from the Luttinger-Ward formulation, we discuss here the general solution. Besides ordinary superconductors with various scattering mechanisms, the obtained free-energy functional can be used for systems, such as superfluid $^{3}\mathrm{He}$ and superconducting systems with spatially inhomogeneou…

Phase transitionPauli paramagneismmagneetitInsulator (electricity)equation02 engineering and technologymagneettikentät01 natural sciencessuprajohteetSuperfluiditystateImpurityCondensed Matter::Superconductivity0103 physical sciences010306 general physicsSuperconductivityPhysicsCondensed matter physicsScatteringmagnetic-fieldvorticesPropagator021001 nanoscience & nanotechnologyFerromagnetismvortexCondensed Matter::Strongly Correlated Electrons0210 nano-technology
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Pho85 and PI(4,5)P(2) regulate different lipid metabolic pathways in response to cold

2019

Lipid homeostasis allows cells to adjust membrane biophysical properties in response to changes in environmental conditions. In the yeast Saccharomyces cerevisiae, a downward shift in temperature from an optimal reduces membrane fluidity, which triggers a lipid remodeling of the plasma membrane. How changes in membrane fluidity are perceived, and how the abundance and composition of different lipid classes is properly balanced, remain largely unknown. Here, we show that the levels of phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2], the most abundant plasma membrane phosphoinositide, drop rapidly in response to a downward shift in temperature. This change triggers a signaling cascade trans…

Phosphatidylinositol 45-DiphosphateSaccharomyces cerevisiae ProteinsMembrane FluiditySphingoid basesAcclimatizationOrm2PhospholipidSaccharomyces cerevisiaePhosphoinositideTriacylglycerideSphingolipidArticle03 medical and health scienceschemistry.chemical_compoundGlycogen Synthase Kinase 3Gene Expression Regulation FungalMembrane fluidityLow temperatureInositolPhosphatidylinositolProtein kinase AMolecular Biology1-IP7030304 developmental biology0303 health sciencesChemistry030302 biochemistry & molecular biologyCell MembraneCell BiologyLipid MetabolismSphingolipidCyclin-Dependent KinasesCell biologyTORC2-Pkh1-Ypk1 signaling moduleCold TemperatureCytosolMetabolic pathwayPhospholipidMetabolic Networks and PathwaysSignal Transduction
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Coexistence Curve Singularities at Critical End Points

1997

We report an extensive Monte Carlo study of critical end point behaviour in a symmetrical binary fluid mixture. On the basis of general scaling arguments, singular behaviour is predicted in the diameter of the liquid-gas coexistence curve as the critical end point is approached. The simulation results show clear evidence for this singularity, as well as confirming a previously predicted singularity in the coexistence chemical potential. Both singularities should be detectable experimentally.

PhysicsBinodalPhase boundaryPhase transitionStatistical Mechanics (cond-mat.stat-mech)Condensed matter physicsFOS: Physical sciencesGeneral Physics and AstronomyThermodynamicsSuperfluidityFerromagnetismLiquid crystalCritical point (thermodynamics)Condensed Matter - Statistical MechanicsPhase diagramPhysical Review Letters
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