Search results for "halophile"

showing 10 items of 35 documents

Vibrio agarivorans sp. nov., a novel agarolytic marine bacterium.

2002

It is proposed that the new Vibrio species Vibrio agarivorans accommodates two agarolytic, halophilic, fermentative bacterial strains isolated from Mediterranean sea water. The cells were gram-negative, oxidase-positive, polarly flagellated bacilli that fermented glucose without gas production and that produced no decarboxylases. They used a wide range of compounds as sole carbon and energy sources. The DNA G+C content was 44.8 mol%. Phylogenetic analysis based on complete 16S and 23S rDNA sequences revealed that the strains belong to the gamma-Proteobacteria, and are specifically related to Vibrio species. Their nearest relatives were species of the Vibrio fischeri group, sharing 16S rDNA …

BacilliSequence analysisMolecular Sequence DataGeneral MedicineSequence Analysis DNABiology16S ribosomal RNAbiology.organism_classificationMicrobiologyDNA RibosomalVibrioHalophileMicrobiologyAgarRNA Ribosomal 23SBiochemistryVibrionaceaeRNA Ribosomal 16SMediterranean SeaSeawaterEnergy sourceEcology Evolution Behavior and SystematicsBacteriaPhylogenyVibrioInternational journal of systematic and evolutionary microbiology
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Boronic Acids of Pharmaceutical Importance Affect the Growth and Photosynthetic Apparatus of Cyanobacteria in a Dose-Dependent Manner

2020

The dynamic increase in the commercial application of antimicrobial derivatives of boronic acids, and potential impact of their presence in aquatic systems, supports the necessity to study the toxicity of these substances towards microorganisms of crucial meaning in the environment. One example of the mentioned derivatives is tavaborole (5-fluoro-substituted benzoxaborole), a pharmaceutical agent with antifungal activity. Cyanobacteria were used as model organisms, which are photoautotrophic prokaryotes, as representative aquatic bacteria and photoautotrophs associated with the plant kingdom. To the best of our knowledge, we investigated this issue for the first time. In order to recognize …

ChlorophyllCyanobacteriaHealth Toxicology and MutagenesisMicroorganismlcsh:Medicinebactericidal activitypharmaceuticalsToxicologyPhotosynthesisaryl boronic acids01 natural sciencescyanobacteriaArticle03 medical and health scienceschemistry.chemical_compoundFood sciencephotosynthetic pigmentsPhotosynthesisCarotenoidchemistry.chemical_classification0303 health sciencesDose-Response Relationship Drugbiology010405 organic chemistry030306 microbiologyChemistryPhycobiliproteinlcsh:RAntimicrobialbiology.organism_classificationBoronic AcidsHalophile0104 chemical sciencesChlorophyllToxins
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Modulation of the growth and metabolic response of cyanobacteria by the multifaceted activity of naringenin

2017

The interactions between the plant-derived bioflavonoid, naringenin, and prokaryotic microalgae representatives (cyanobacteria), were investigated with respect to its influence on the growth and metabolic response of these microorganisms. To achieve reliable results, the growth of cyanobacteria was determined based on measurements of chlorophyll content, morphological changes were assessed through microscopic observations, and the chemical response of cells was determined using liquid and gas chromatography (HPLC; GC-FID). The results show that micromolar levels of naringenin stimulated the growth of cyanobacteria. Increased growth was observed for halophilic strains at naringenin concentra…

ChlorophyllPigments0301 basic medicineCyanobacteriaNaringeninExopolysaccharidesChloroplastsMicroorganismCellGlycobiologyMarine and Aquatic Scienceslcsh:MedicineFresh WaterPlant ScienceBiochemistrychemistry.chemical_compoundElectron MicroscopyNostoclcsh:ScienceLiquid ChromatographyMicroscopyMultidisciplinarybiologyChemistryChromatographic Techniquesfood and beveragesHalophilemedicine.anatomical_structureBiochemistryFlavanonesPhysical SciencesScanning Electron MicroscopyCellular Structures and OrganellesCellular TypesResearch ArticleFreshwater EnvironmentsChromatography GasPlant Cell BiologyMaterials Science030106 microbiologyCyanobacteriaResearch and Analysis MethodsCell wallExcretion03 medical and health sciencesPolysaccharidesPlant CellsmedicineMaterials by AttributeBacteriaOrganic PigmentsEcology and Environmental Scienceslcsh:ROrganismsBiology and Life SciencesAquatic EnvironmentsCell Biologybiology.organism_classificationAnabaenaHigh Performance Liquid Chromatography030104 developmental biologyEarth Scienceslcsh:QBacteriaChromatography LiquidNostoc muscorumPLOS ONE
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Vibrio palustris sp. nov. and Vibrio spartinae sp. nov., two novel members of the Gazogenes clade, isolated from salt-marsh plants (Arthrocnemum macr…

2017

Two bacterial strains, EAod9T and SMJ21T, isolated from salt-marsh plants, were determined to be related to species of the genus Vibrio from from 16S rRNA sequence comparisons. Their closest phylogenetic relatives are members of the Gazogenes clade, Vibrio mangrovi and Vibrio rhizosphaerae , which show the greatest similarity to the SMJ21TrRNA sequence (97.3 and 97.1 %, respectively), while EAod9T had less than 97.0 % similarity to any other species of the genus Vibrio . Both strains share the basic characteristics of the genus Vibrio , as they are Gram-stain negative, motile, slightly halophilic, facultatively anaerobic bacteria. In addition, they are oxidase-negative and unable to grow on…

DNA Bacterial0301 basic medicineSequence analysisPoaceaeMicrobiologyMicrobiologyProdigiosin03 medical and health scienceschemistry.chemical_compoundRNA Ribosomal 16SBotanyPhylogenyEcology Evolution Behavior and SystematicsVibrioBase CompositionAmaranthaceaebiologyStrain (chemistry)PigmentationFatty AcidsSalt-Tolerant PlantsSequence Analysis DNAGeneral MedicineRibosomal RNAbiology.organism_classification16S ribosomal RNAVibrioHalophileBacterial Typing Techniques030104 developmental biologychemistrySpainWetlandsAnaerobic bacteriaInternational Journal of Systematic and Evolutionary Microbiology
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Grimontia celer sp. nov., from sea water

2016

Strain 96-237T, a Gram-reaction-negative, curved- to spiral-shaped motile bacterium, isolated from coastal marine water, was found to be related to species of the genus Grimontia by 16S rRNA gene sequence comparison, sharing 98.3 % similarity to Grimontia marina CECT 8713Tand 98.8 % to 'Grimontiaindica' AK16. Phenotypic analysis revealed that strain 96-237T is slightly halophilic, mesophilic and facultatively anaerobic, fermenting d-glucose, d-ribose, d-mannose, d-mannitol, maltose and sucrose. It was positive for oxidase and indole production and negative for arginine dihydrolase and lysine and ornithine decarboxylases. Its major fatty acids were C16 : 1ω7c/C16 : 1ω6c (SF3), C18 : 1ω7c and…

DNA Bacterial0301 basic medicineVibrionaceaeMicrobiologyMicrobiology03 medical and health sciencesVibrionaceaeRNA Ribosomal 16SSeawaterPhylogenyEcology Evolution Behavior and SystematicsBase CompositionOxidase testbiologyStrain (chemistry)Fatty Acidsfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classification16S ribosomal RNAHalophileBacterial Typing Techniques030104 developmental biologySpainFermentationGrimontia hollisaeBacteriaInternational Journal of Systematic and Evolutionary Microbiology
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Jannaschia rubra sp. nov., a red-pigmented bacterium isolated from sea water.

2005

A Gram-negative, slightly halophilic, strictly aerobic, chemo-organotrophic bacterium was isolated from Mediterranean sea water near Valencia (Spain). Comparison of the almost complete 16S rRNA gene sequence showed that strain 4SM3T belonged to the Roseobacter group, with Jannaschia helgolandensis as its closest relative, with a similarity of 98·7 %. DNA–DNA hybridization analysis showed that the Mediterranean isolate had a level of relatedness of less than 42 % with J. helgolandensis and therefore that it represented a novel species of the genus Jannaschia. Phenotypic characteristics gave further evidence that the two organisms are not related at the species level. Isolate 4SM3T grows on s…

DNA BacterialGenotypeMolecular Sequence DataMicrobiologyDNA RibosomalMediterranean seaRNA Ribosomal 16SBotanyMediterranean SeaSeawaterRhodobacteraceaeRhodobacteraceaeEcology Evolution Behavior and SystematicsPhylogenybiologyNucleic Acid HybridizationGenes rRNAGeneral MedicinePigments BiologicalSequence Analysis DNARoseobacterRibosomal RNA16S ribosomal RNAbiology.organism_classificationHalophilePhenotypeTaxonomy (biology)BacteriaInternational journal of systematic and evolutionary microbiology
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Actibacterium mucosum gen. nov., sp. nov., a marine alphaproteobacterium from Mediterranean seawater

2012

Strain R46T, a marine alphaproteobacterium, was isolated from Mediterranean seawater at Malvarrosa beach, Valencia, Spain. It is an aerobic chemo-organotrophic, mesophilic and slightly halophilic organism, with complex ionic requirements. Phylogenetic analyses based on the 16S rRNA and gyrB gene sequences showed that strain R46T formed a separate branch within the family Rhodobacteraceae , bearing similarities below 94.7 and 80.3 %, respectively, to any other recognized species. It contained Q10 as the predominant isoprenoid quinone and C18 : 1ω7c/C18 : 1ω6c as the major cellular fatty acid. Phosphatidylglycerol was the only identified polar lipid, although other lipids were also detected. …

DNA BacterialMolecular Sequence DataBiologyMicrobiologyGenusPhylogeneticsRNA Ribosomal 16SBotanyMediterranean SeaSeawaterRhodobacteraceaePhylogenyEcology Evolution Behavior and SystematicsBase CompositionPhylogenetic treeStrain (chemistry)Fatty AcidsQuinonesPhosphatidylglycerolsSequence Analysis DNAGeneral MedicineRibosomal RNA16S ribosomal RNAHalophileBacterial Typing TechniquesType speciesSpainInternational Journal of Systematic and Evolutionary Microbiology
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Description of Alcanivorax venustensis sp. nov. and reclassification of Fundibacter jadensis DSM 12178T (Bruns and Berthe-Corti 1999) as Alcanivorax …

2003

Two strains of a novel bacterium were isolated independently of each other, from different depths in the Mediterranean Sea, within a time period of 7 months, using two different isolation approaches that were focused on different objectives. Both strains, designated ISO1 and ISO4T, were halophilic, Gram-negative, strictly aerobic, straight rods that were oxidase- and catalase-positive. Both strains produced mucoid colonies in some defined minimal media and were able to grow with organic acids and some alkanes; they were also able to accumulate intracellular poly-beta-hydroxybutyrate granules. The G + C content of the DNA of strain ISO4T was 66 mol%. Comparative analysis of 16S rRNA gene seq…

DNA BacterialMolecular Sequence DataDNA RibosomalMicrobiologyMicrobiologySpecies SpecificityPhylogeneticsRNA Ribosomal 16STerminology as TopicGammaproteobacteriaMediterranean SeaSeawaterEcosystemPhylogenyEcology Evolution Behavior and SystematicsGeneticsBase CompositionBase SequencebiologyFatty AcidsGeneral MedicineRibosomal RNAbiology.organism_classification16S ribosomal RNAHalophileRNA BacterialPhenotypeMicroscopy Electron ScanningTaxonomy (biology)AlcanivoraxGammaproteobacteriaBacteriaInternational Journal of Systematic and Evolutionary Microbiology
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Thalassobacter stenotrophicus gen. nov., sp. nov., a novel marine alpha-proteobacterium isolated from Mediterranean sea water.

2005

A Gram-negative, slightly halophilic, strictly aerobic, chemo-organotrophic bacterium was isolated from Mediterranean sea water near Valencia (Spain). 16S rRNA gene sequence comparisons showed that the isolate represented a separate branch within the α-3 subclass of the Proteobacteria, now included within the order ‘Rhodobacterales’. Jannaschia helgolandensis was the closest relative, but their low sequence similarity and other features indicated that they were not related at the genus level. Isolate 5SM22T produced bacteriochlorophyll a and grew on solid media as regular salmon-pink colonies. Cells are motile rods, with polar flagella. The DNA G+C content is 59·1 mol%. Morphological, physi…

DNA BacterialMolecular Sequence DataMicrobiologyDNA RibosomalMediterranean seaGenusRNA Ribosomal 16SBotanyMediterranean SeaSeawaterRhodobacteraceaeEcology Evolution Behavior and SystematicsPhylogenybiologyGenes rRNAGeneral MedicineBacteriochlorophyll ASequence Analysis DNAbiology.organism_classification16S ribosomal RNAHalophileCulture MediaRhodobacteralesPhenotypeSpainTaxonomy (biology)ProteobacteriaBacteriaInternational journal of systematic and evolutionary microbiology
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Neptuniibacter caesariensis gen. nov., sp. nov., a novel marine genome-sequenced gammaproteobacterium.

2007

7 pages, 1 figure, 1 table

DNA BacterialOceanospirillaceaeSequence analysisMovementMolecular Sequence DataCarboxylic AcidsZoologyAlteromonadaceaeMicrobiologyDNA RibosomalMicrobiologyMembrane LipidsPhylogeneticsRNA Ribosomal 16SSequence Homology Nucleic AcidMediterranean SeaSeawaterAmino AcidsEcology Evolution Behavior and SystematicsPhylogenyBase CompositionbiologyPhylogenetic treeAlteromonadaceaeFatty AcidsGenes rRNAGeneral MedicineSequence Analysis DNARibosomal RNAbiology.organism_classification16S ribosomal RNAHalophileBacterial Typing TechniquesRNA BacterialOceanospirillaceaeGammaproteobacteriaGenome BacterialInternational journal of systematic and evolutionary microbiology
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