Search results for "leaf"

showing 10 items of 371 documents

Transcriptome analysis and codominant markers development in caper, a drought tolerant orphan crop with medicinal value.

2019

AbstractCaper (Capparis spinosa L.) is a xerophytic shrub cultivated for its flower buds and fruits, used as food and for their medicinal properties. Breeding programs and even proper taxonomic classification of the genus Capparis has been hampered so far by the lack of reliable genetic information and molecular markers. Here, we present the first genomic resource for C. spinosa, generated by transcriptomic approach and de novo assembly. The sequencing effort produced nearly 80 million clean reads assembled into 124,723 unitranscripts. Careful annotation and comparison with public databases revealed homologs to genes with a key role in important metabolic pathways linked to abiotic stress t…

0301 basic medicineCapparisAgricultural geneticsabiotic stressSAPsPlant geneticsScienceDrought toleranceSequence assemblyComputational biologyBiologyArticleTranscriptome03 medical and health sciences0302 clinical medicinefoodStress PhysiologicalEST-SSRGeneorphan cropPlant Proteinsde novo leaf transcriptomeMultidisciplinaryPlants MedicinalPhenylpropanoidAbiotic stressSettore BIO/02 - Botanica SistematicaCapparis spinosaGene Expression ProfilingCaper Capparis spinosa Codominant markers Transcriptome analysis Orphan cropQRfood and beveragesbiology.organism_classificationfood.foodCapparis spinosa L.DroughtsCapparis030104 developmental biologyNGSMedicineTranscriptome030217 neurology & neurosurgeryBiomarkersMetabolic Networks and PathwaysScientific reports
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Identification and characterization of durum wheat microRNAs in leaf and root tissues.

2017

MicroRNAs are a class of post-transcriptional regulators of plant developmental and physiological processes and responses to environmental stresses. Here, we present the study regarding the annotation and characterization of MIR genes conducted in durum wheat. We characterized the miRNAome of leaf and root tissues at tillering stage under two environmental conditions: irrigated with 100% (control) and 55% of evapotranspiration (early water stress). In total, 90 microRNAs were identified, of which 32 were classified as putative novel and species-specific miRNAs. In addition, seven microRNA homeologous groups were identified in each of the two genomes of the tetraploid durum wheat. Differenti…

0301 basic medicineDifferential expression analysisBiology580 Plants (Botany)Triticum turgidumGenomePlant Roots03 medical and health sciencesGene Expression Regulation PlantStress PhysiologicalSettore AGR/07 - Genetica AgrariamicroRNABotanyGeneticsGeneTranscription factorDurum wheatTriticumGeneticsDroughtmicroRNAGene ontologyWater stressfood and beveragesPlant RootGeneral MedicineSettore AGR/02 - Agronomia E Coltivazioni ErbaceeDroughtsPlant LeavesLeafMicroRNAs030104 developmental biologyRootOrgan SpecificityRNA PlantIdentification (biology)Plant LeaveFunctionalintegrative genomics
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Phenolic extract from oleaster (Olea europaea var. Sylvestris) leaves reduces colon cancer growth and induces caspase-dependent apoptosis in colon ca…

2017

Erratum inCorrection: Phenolic extract from oleaster (Olea europaea var. Sylvestris) leaves reduces colon cancer growth and induces caspase-dependent apoptosis in colon cancer cells via the mitochondrial apoptotic pathway. [PLoS One. 2017]; International audience; Dietary polyphenols, derived from natural products, have received a great interest for their chemopreventive properties against cancer. In this study, we investigated the effects of phenolic extract of the oleaster leaves (PEOL) on tumor growth in mouse model and on cell death in colon cancer cell lines. We assessed the effect of oleaster leaf infusion on HCT116 (human colon cancer cell line) xenograft growth in athymic nude mice.…

0301 basic medicineLeavesCarcinoma Cellslcsh:MedicineApoptosisPlant ScienceMitochondrionEndoplasmic ReticulumBiochemistry[ SDV.CAN ] Life Sciences [q-bio]/Cancer0302 clinical medicineMedicine and Health SciencesMitochondrial calcium uptakeDiseaselcsh:ScienceEnergy-Producing OrganellesStainingchemistry.chemical_classificationSecretory PathwayMultidisciplinaryCell DeathPlant AnatomyCytochrome cCell StainingAnimal ModelsMitochondriaOlive Leaf ExtractChemistryOncologyExperimental Organism SystemsBiochemistryCell Processes030220 oncology & carcinogenesisPhysical SciencesCellular Structures and OrganellesResearch ArticleProgrammed cell deathActivationMouse Models[SDV.CAN]Life Sciences [q-bio]/CancerBioenergeticsBiologyResearch and Analysis MethodsColorectal-CancerCaspase-Dependent Apoptosis03 medical and health sciencesModel OrganismsPhenolsCytochrome-CColorectal CancerReactive oxygen speciesP53Cell growthProteinlcsh:RChemical CompoundsBiology and Life SciencesCancers and NeoplasmsPolyphenolsCell BiologyMolecular biology030104 developmental biologychemistrySpecimen Preparation and TreatmentApoptosisbiology.proteinCalciumlcsh:QPLoS ONE
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St. Augustinegrass accessions planted in northern, central and southern Italy: Growth and morphological traits during establishment

2018

The use of warm season turfgrasses is a consolidated trend in the climatic transition zone of Mediterranean countries, in particular St. Augustinegrass (Stenotaphrum secundatum (Walt.) Kuntze) begins to be widespread in warm coastal areas. However, little is known about the performance of the different cultivars of this species in southern Europe. In 2016-2017 a trial was carried out in three locations in Italy, Padova, Pisa, and Palermo, located in the north, center and south of the country respectively. Four cultivars (Floratine, Captiva, Sapphire, Palmetto) and five ecotypes (CeRTES 201, CeRTES 202, CeRTES 203, CeRTES 204, CeRTES 205) were compared in terms of their growth characteristic…

0301 basic medicineMediterranean climateStenotaphrumGreen upBiologylcsh:Plant cultureWarm seasonStenotaphrum secundatumturf quality.lcsh:Agricultureleaf widthGreen up; Ground cover; Internode length; Leaf width; Stenotaphrum secundatum; Turf quality; Agronomy and Crop Science03 medical and health sciencesground coverlcsh:SB1-1110Cultivarturf qualityGreen colourEcotypeStolonlcsh:Sbiology.organism_classificationSettore AGR/02 - Agronomia E Coltivazioni Erbacee030104 developmental biologyAgronomyinternode lengthAgronomy and Crop Science
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Thrombo-Inflammation in Cardiovascular Disease

2020

AbstractThrombo-inflammation describes the complex interplay between blood coagulation and inflammation that plays a critical role in cardiovascular diseases. The third Maastricht Consensus Conference on Thrombosis assembled basic, translational, and clinical scientists to discuss the origin and potential consequences of thrombo-inflammation in the etiology, diagnostics, and management of patients with cardiovascular disease, including myocardial infarction, stroke, and peripheral artery disease. This article presents a state-of-the-art reflection of expert opinions and consensus recommendations regarding the following topics: (1) challenges of the endothelial cell barrier; (2) circulating …

0301 basic medicineVENOUS THROMBOSISmedicine.medical_specialtypulmonary embolismNeutrophilsIschemiaISCHEMIA-REPERFUSION INJURYDisease030204 cardiovascular system & hematologyCATHETER-DIRECTED THROMBOLYSIS03 medical and health sciences0302 clinical medicinePERIPHERAL ARTERY-DISEASEMedicineAnimalsHumansPlateletMyocardial infarctionDEEP-VEIN THROMBOSIScoagulationIntensive care medicineStrokeBlood CoagulationExpert Testimonythrombosisbusiness.industryACUTE CORONARY SYNDROMESNEUTROPHIL EXTRACELLULAR TRAPSHematologyNeutrophil extracellular trapsVenous ThromboembolismACTIVATABLE FIBRINOLYSIS INHIBITORmedicine.diseaseAtherosclerosisThrombosisstrokeImmunity Innate3. Good healthVenous thrombosis030104 developmental biologymyocardial infarctionTISSUE FACTORCardiovascular DiseasesinflammationplateletsEndothelium VascularbusinessSUBCLINICAL LEAFLET THROMBOSISThrombosis and Haemostasis
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Comparison between SMOS Vegetation Optical Depth products and MODIS vegetation indices over crop zones of the USA

2014

The Soil Moisture and Ocean Salinity (SMOS) mission provides multi-angular, dual-polarised brightness temperatures at 1.4 GHz, from which global soil moisture and vegetation optical depth (tau) products are retrieved. This paper presents a study of SMOS' tau product in 2010 and 2011 for crop zones of the USA. Retrieved tau values for 504 crop nodes were compared to optical/IR vegetation indices from the MODES (Moderate Resolution Imaging Spectroradiometer) satellite sensor, including the Normalised Difference Vegetation Index (NDVI), Enhanced Vegetation Index (EVE), Leaf Area Index (LAI), and a Normalised Difference Water Index (NOW!) product. tau values were observed to increase during the…

2. Zero hunger010504 meteorology & atmospheric sciences0211 other engineering and technologiesSoil ScienceGrowing seasonGeology02 engineering and technologyVegetationEnhanced vegetation index01 natural sciencesNormalized Difference Vegetation Indexvegetation optical depthLinear regressionEnvironmental scienceL-band radiometryModerate-resolution imaging spectroradiometerComputers in Earth SciencesLeaf area indexoptical vegetation indices[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processingWater contentSMOS021101 geological & geomatics engineering0105 earth and related environmental sciencesRemote sensingRemote Sensing of Environment
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Multitemporal and multiresolution leaf area index retrieval for operational local rice crop monitoring

2016

Abstract This paper presents an operational chain for high-resolution leaf area index (LAI) retrieval from multiresolution satellite data specifically developed for Mediterranean rice areas. The proposed methodology is based on the inversion of the PROSAIL radiative transfer model through the state-of-the-art nonlinear Gaussian process regression (GPR) method. Landsat and SPOT5 data were used for multitemporal LAI retrievals at high-resolution. LAI estimates were validated using time series of in situ LAI measurements collected during the rice season in Spain and Italy. Ground LAI data were collected with smartphones using PocketLAI, a specific phone application for LAI estimation. Temporal…

2. Zero hunger010504 meteorology & atmospheric sciencesMean squared error0211 other engineering and technologiesSoil ScienceGeologyInversion (meteorology)02 engineering and technologyCrop monitoring; Rice; Leaf area index (LAI) retrieval; PROSAIL; Smartphone; Gaussian process regression (GPR); Landsat; SPOT5 Take501 natural sciencesAtmospheric radiative transfer codesKrigingSatellite dataGround-penetrating radarEnvironmental scienceComputers in Earth SciencesLeaf area indexRice crop021101 geological & geomatics engineering0105 earth and related environmental sciencesRemote sensingRemote Sensing of Environment
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Seasonal variations of leaf area index of agricultural fields retrieved from Landsat data

2008

Abstract The derivation of leaf area index (LAI) from satellite optical data has been the subject of a large amount of work. In contrast, few papers have addressed the effective model inversion of high resolution satellite images for a complete series of data for the various crop species in a given region. The present study is focused on the assessment of a LAI model inversion approach applied to multitemporal optical data, over an agricultural region having various crop types with different crop calendars. Both the inversion approach and data sources are chosen because of their wide use. Crops in the study region (Barrax, Castilla–La Mancha, Spain) include: cereal, corn, alfalfa, sugar bee…

2. Zero hunger010504 meteorology & atmospheric sciencesPhenology0211 other engineering and technologiesSoil ScienceInverse transform samplingGeologyInversion (meteorology)02 engineering and technology15. Life on land01 natural sciencesNormalized Difference Vegetation IndexCropEnvironmental sciencePlant coverComputers in Earth SciencesLeaf area indexEmpirical relationship021101 geological & geomatics engineering0105 earth and related environmental sciencesRemote sensingRemote Sensing of Environment
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2021

Nitrogen (N) is one of the key nutrients supplied in agricultural production worldwide. Over-fertilization can have negative influences on the field and the regional level (e.g., agro-ecosystems). Remote sensing of the plant N of field crops presents a valuable tool for the monitoring of N flows in agro-ecosystems. Available data for validation of satellite-based remote sensing of N is scarce. Therefore, in this study, field spectrometer measurements were used to simulate data of the Sentinel-2 (S2) satellites developed for vegetation monitoring by the ESA. The prediction performance of normalized ratio indices (NRIs), random forest regression (RFR) and Gaussian processes regression (GPR) f…

2. Zero hunger010504 meteorology & atmospheric sciencesSpectrometer0211 other engineering and technologiesRed edge02 engineering and technologyVegetationSpectral bands15. Life on land01 natural sciencesRegressionRandom forestGeneral Earth and Planetary SciencesEnvironmental sciencePrecision agricultureLeaf area index021101 geological & geomatics engineering0105 earth and related environmental sciencesRemote sensingRemote Sensing
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Prototyping Sentinel-2 green LAI and brown LAI products for cropland monitoring.

2022

Abstract For agricultural applications, identification of non-photosynthetic above-ground vegetation is of great interest as it contributes to assess harvest practices, detecting crop residues or drought events, as well as to better predict the carbon, water and nutrients uptake. While the mapping of green Leaf Area Index (LAI) is well established, current operational retrieval models are not calibrated for LAI estimation over senescent, brown vegetation. This not only leads to an underestimation of LAI when crops are ripening, but is also a missed monitoring opportunity. The high spatial and temporal resolution of Sentinel-2 (S2) satellites constellation offers the possibility to estimate …

2. Zero hungerCrop residue010504 meteorology & atmospheric sciencesSpatiotemporal Analysis0208 environmental biotechnologySoil ScienceRed edgeGeology02 engineering and technology15. Life on landGreen vegetation01 natural sciencesShortwave infraredGreen leaf020801 environmental engineeringTemporal resolutionEnvironmental scienceSatelliteComputers in Earth Sciences0105 earth and related environmental sciencesRemote sensingRemote sensing of environment
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