Search results for "map"

showing 10 items of 3484 documents

Alexandrium pacificum Litaker sp. nov (Group IV): Resting cyst distribution and toxin profile of vegetative cells in Bizerte Lagoon (Tunisia, Souther…

2015

International audience; A high spatial resolution sampling of Alexandrium pacificum cysts, along with sediment characteristics (% H2O, % organic matter (OM), granulometry), vegetative cell abundance and environmental factors were investigated at 123 study stations in Bizerte Lagoon (Tunisia). Morphological examination and ribotyping of cells obtained from a culture called ABZ1 obtained from a cyst isolated in lagoon sediment confirmed that the species was A. pacificum. The toxin profile from the ABZ1 culture harvested during exponential growth phase was simple and composed of the N-sulfocarbamoyl toxins C1 (9.82 pg toxin cell−1), the GTX6 (3.26 pg toxin cell−1) and the carbamoyl toxin Neo-S…

0106 biological sciencesPlant ScienceVegetative cells010501 environmental sciencesAquatic ScienceBiologySpatial distribution01 natural sciencesAlexandrium pacificum Litaker sp. nov (Alexandrium catenella-group IV (Whedon & Kofoid)[ SDE ] Environmental SciencesRibotypingMediterranean seaAquatic plantAlexandrium pacificum Litaker sp nov (Alexandrium catenella-group IV (Whedon & Kofoid) Balech)BotanymedicineOrganic matterCyst14. Life underwater0105 earth and related environmental scienceschemistry.chemical_classificationCysts010604 marine biology & hydrobiologyRibotypemedicine.disease6. Clean waterToxin profilechemistryMappingGranulometry[SDE]Environmental SciencesBalech)Taxonomy (biology)
researchProduct

Fine-scale population dynamics in a marine fish species inferred from dynamic state-space models

2017

1. Identifying the spatial scale of population structuring is critical for the conservation of natural populations and for drawing accurate ecological inferences. However, population studies often use spatially aggregated data to draw inferences about population trends and drivers, potentially masking ecologically relevant population sub‐structure and dynamics. 2. The goals of this study were to investigate how population dynamics models with and without spatial structure affect inferences on population trends and the identification of intrinsic drivers of population dynamics (e.g. density dependence). 3. Specifically, we developed dynamic, age‐structured, state‐space models to test differe…

0106 biological sciencesPopulation DynamicsFishingPopulationEnvironment010603 evolutionary biology01 natural sciencesAnimalsGaduseducationEcology Evolution Behavior and Systematicseducation.field_of_studyBiomass (ecology)biologyNorwayEcology010604 marine biology & hydrobiologyFishesModels Theoreticalbiology.organism_classificationDensity dependenceGeographyGadus morhuaHabitatSpatial ecologyAnimal Science and ZoologyScale (map)Animal DistributionJournal of Animal Ecology
researchProduct

Impact of sewage sludges on Medicago truncatula symbiotic proteome

2004

The effects of sewage sludges were investigated on the symbiotic interactions between the model plant Medicago truncatula and the arbuscular mycorrhizal fungus Glomus mosseae or the rhizobial bacteria Sinorhizobium meliloti. By comparison to a control sludge showing positive effects on plant growth and root symbioses, sludges enriched with polycylic aromatic hydrocarbons or heavy metals were deleterious. Symbiosis-related proteins were detected and identified by two-dimensional electrophoresis and matrix-assisted laser desorption ionization mass spectrometry, and image analysis was used to study the effects of sewage sludges on M. truncatula symbiotic proteome.

0106 biological sciencesProteomeSewagePlant ScienceHorticulture01 natural sciencesBiochemistryPeptide Mapping12. Responsible consumption03 medical and health sciencesSymbiosisMycorrhizaeBotanyMedicagoElectrophoresis Gel Two-DimensionalMycorrhizaSymbiosisMolecular BiologyGlomusComputingMilieux_MISCELLANEOUS[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy030304 developmental biologyPlant Proteins0303 health sciencesSinorhizobium melilotibiologySewagebusiness.industryfungifood and beveragesGeneral MedicineHydrogen-Ion Concentrationbiology.organism_classification6. Clean waterMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationProteomebusinessSludge010606 plant biology & botanySinorhizobium meliloti
researchProduct

Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance.

2000

AbstractPosttranscriptional gene silencing (PTGS) in plants results from the degradation of mRNAs and shows phenomenological similarities with quelling in fungi and RNAi in animals. Here, we report the isolation of sgs2 and sgs3 Arabidopsis mutants impaired in PTGS. We establish a mechanistic link between PTGS, quelling, and RNAi since the Arabidopsis SGS2 protein is similar to an RNA-dependent RNA polymerase like N. crassa QDE-1, controlling quelling, and C. elegans EGO-1, controlling RNAi. In contrast, SGS3 shows no significant similarity with any known or putative protein, thus defining a specific step of PTGS in plants. Both sgs2 and sgs3 mutants show enhanced susceptibility to virus, d…

0106 biological sciencesRNA-induced transcriptional silencingDNA PlantRNA-induced silencing complexTrans-acting siRNAMolecular Sequence DataPotyvirusArabidopsisRNA-dependent RNA polymerase[SDV.BC]Life Sciences [q-bio]/Cellular BiologyGenes Plant01 natural sciencesCucumovirusGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesSolanum lycopersicumRNA interferenceArabidopsisGene expressionGene silencingAmino Acid SequenceGene SilencingCloning MolecularRNA Processing Post-Transcriptional[SDV.BC] Life Sciences [q-bio]/Cellular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant DiseasesPlant ProteinsGenetics0303 health sciencesbiologyBase SequenceBiochemistry Genetics and Molecular Biology(all)Arabidopsis ProteinsfungiTobamovirusChromosome MappingGENETIQUEbiology.organism_classificationRNA-Dependent RNA PolymeraseMutagenesis010606 plant biology & botanyCell
researchProduct

Temporal and spatial patterns of trawl fishing activities in the Adriatic Sea (Central Mediterranean Sea, GSA17)

2020

Abstract Trawl fishing activities have occurred for centuries on large spatial scale in the entire Mediterranean Sea, and today they are considered as one of the main and widespread causes of anthropogenic disturbance and habitat alteration in the marine environment. In order to delineate when, where and how marine ecosystems have been perturbed and to implement ecosystem-based management strategies, the identification and investigation of the spatial and temporal distribution of fishing effort and the fleet dynamics play a key role. In this context, Geospatial Technologies such as the Automatic Identification System (AIS) could represent a useful tool. The aim of the present work is to rec…

0106 biological sciencesSettore BIO/07 - Ecologia010504 meteorology & atmospheric sciencesHigh resolution mapsFishingContext (language use)Management Monitoring Policy and LawAquatic ScienceOceanography01 natural sciencesMediterranean seaFishing effortMarine ecosystemEcosystem14. Life underwaterAIS; Fishery management; Fishing effort; High resolution maps; Swept area; Trawl fishery0105 earth and related environmental sciencesSettore INF/01 - InformaticaTrawling010604 marine biology & hydrobiologyAISFishery managementFisheryGeographyHabitatTrawl fisherySpatial ecologySettore ING-INF/05 - Sistemi di Elaborazione delle InformazioniSwept area
researchProduct

The author's reply to N.R. Haddaway.

2017

Abstract In this reply we respond to the commentary of Dr. Haddaway addressed in searching for pitfalls in our systematic mapping exercise “Collating science-based evidence to inform public opinion on the environmental effects of marine drilling platforms in the Mediterranean Sea” recently published in Journal of Environmental Management (Mangano, M.C. and Sara, G. 2017. Journal of Environmental Management 188: 195–202). We discussed each so called “pitfalls” and, in our opinion, the main cornerstones of systematic map – SM (repeatability, comprehensiveness, transparency, traceability, quality, generalizability) are safe guaranteeing the “gold standard” required by this technique. Where nee…

0106 biological sciencesSettore BIO/07 - EcologiaEngineeringEnvironmental EngineeringTailoringmedia_common.quotation_subject010501 environmental sciencesManagement Monitoring Policy and LawPublic opinionTransparency010603 evolutionary biology01 natural sciencesMediterranean SeaQuality (business)Operations managementGeneralizability theoryRepeatabilityBaseline (configuration management)Waste Management and Disposal0105 earth and related environmental sciencesmedia_commonMinimum requirementProtocol (science)End userbusiness.industrySystematic mapGeneral MedicineComprehensiveneData scienceTransparency (behavior)Public OpinionbusinessNexus (standard)Journal of environmental management
researchProduct

Downscaling rice yield simulation at sub-field scale using remotely sensed LAI data

2019

Abstract Crop modeling and remote sensing are key tools to gain deeper understanding on cropping system dynamics and, ultimately, to increase the sustainability of agricultural productions. This study presents a system to estimate rice yields at sub-field scale based on the integration of a biophysical model and remotely sensed products. Leaf area index (LAI) data derived from decametric optical imageries (i.e., Landsat-8, Landsat-7 and Sentinel–2A) were assimilated into the WARM rice model via automatic recalibration of crop parameters at a fine spatial resolution (30 m × 30 m), targeting the lowest error between simulated and remotely sensed LAI. The performance of the system was evaluate…

0106 biological sciencesSoil SciencePlant Science01 natural sciencesYield (wine)WARM modelCrop modelLeaf area indexCropping systemDecision support systemRemote sensing2. Zero hungerCrop yieldYield predictions04 agricultural and veterinary sciencesRemote sensing15. Life on landAgronomyData assimilation040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental sciencePrecision agricultureScale (map)Agronomy and Crop ScienceCropping010606 plant biology & botanyDownscalingEuropean Journal of Agronomy
researchProduct

Cytosolic calcium rises and related events in ergosterol-treated Nicotiana cells

2011

International audience; The typical fungal membrane component ergosterol was previously shown to trigger defence responses and protect plants against pathogens. Most of the elicitors mobilize the second messenger calcium, to trigger plant defences. We checked the involvement of calcium in response to ergosterol using Nicotiana plumbaginifolia and Nicotiana tabacum cv Xanthi cells expressing apoaequorin in the cytosol. First, it was verified if ergosterol was efficient in these cells inducing modifications of proton fluxes and increased expression of defence-related genes. Then, it was shown that ergosterol induced a rapid and transient biphasic increase of free [Ca2þ]cyt which intensity dep…

0106 biological sciencesTime FactorsPhysiologyNicotiana tabacumPlant SciencesterolsSecond Messenger Systemstobacco01 natural scienceschemistry.chemical_compoundCytosolpolycyclic compoundsPhosphorylationCalcium signalingreactive oxygen species0303 health sciencesErgosterolelicitorbiologyergosterolHydrogen-Ion ConcentrationPlants Genetically ModifiedRecombinant ProteinsCell biologyBiochemistrySecond messenger systemReactive oxygen species; Calcium signature; Elicitor; Signal transduction; MAPKs; tobaccolipids (amino acids peptides and proteins)Protonssignal transductionCell Survivalnicotiana plumbaginifoliachemistry.chemical_elementnicotiana tabacumoxydantCalciumcalcium signature03 medical and health sciencesAequorinMAPKsBAPTAGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyCalcium Signaling030304 developmental biologyMitogen-Activated Protein Kinase KinasesCalcium metabolismHydrogen Peroxidebiochemical phenomena metabolism and nutritionbiology.organism_classificationCytosolchemistryCalciumApoproteins010606 plant biology & botany
researchProduct

Global endemics-area relationships of vascular plants

2019

Endemics–Area Relationships (EARs)are fundamental in theoretical and applied biogeography for understanding distribution patterns and promoting biodiversity conservation. However, calculating EARs for vascular plant species from existing data is problematic because of biased knowledge of endemic species distributions and differences between taxonomies. We aimed to overcome these challenges by developing a new standardized global dataset based on expert knowledge to produce a set of global EARs. We developed a nested circle design, with grain sizes of 10 4 , 10 5 , 10 6 , 10 7 , and 10 8 km 2 , respectively, and a global distribution of plots based on a stratified random scheme. The number …

0106 biological sciencesVascular plantZero-endemic plotslcsh:QH1-199.5Range (biology)Biogeographylcsh:General. Including nature conservation geographical distributionManagement Monitoring Policy and Law010603 evolutionary biology01 natural sciencesMinimum and maximum estimatelcsh:QH540-549.5StatisticsEndemismZero-endemic plotNature and Landscape ConservationEstimationbiologyEcology010604 marine biology & hydrobiologySampling (statistics)Minimum and maximum estimatesbiology.organism_classificationGeographyGlobal referenceExpert knowledgelcsh:EcologySpecies richnessScale (map)Distribution of land and sea
researchProduct

Ecophysiological Modeling of Grapevine Water Stress in Burgundy Terroirs by a Machine-Learning Approach

2016

13 pages; International audience; In a climate change scenario, successful modeling of the relationships between plant-soil-meteorology is crucial for a sustainable agricultural production, especially for perennial crops. Grapevines (Vitis vinifera L. cv Chardonnay) located in eight experimental plots (Burgundy, France) along a hillslope were monitored weekly for 3 years for leaf water potentials, both at predawn (Ψpd) and at midday (Ψstem). The water stress experienced by grapevine was modeled as a function of meteorological data (minimum and maximum temperature, rainfall) and soil characteristics (soil texture, gravel content, slope) by a gradient boosting machine. Model performance was a…

0106 biological sciences[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologySoil texture[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/Agronomy[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyContext (language use)Plant Science[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studylcsh:Plant culture01 natural sciencesVineyardwater stressWater balancewater balance[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/Agronomygradient boosting machine (GBM)Climate change scenarioBotany[SDV.BV]Life Sciences [q-bio]/Vegetal Biologylcsh:SB1-1110Original ResearchTerroir2. Zero hungerHydrologymachine-learninggrapevine (Vitis vinifera L.)temperature04 agricultural and veterinary sciences15. Life on landcarbon isotope discrimination δ13Cplant-soil water relationships040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceGradient boostingScale (map)carbon isotope discrimination d13Ccarbon isotopic discrimination (δ13C)010606 plant biology & botanyFrontiers in Plant Science
researchProduct