Search results for "microbial community"

Genetic and Environmental Controls on Nitrous Oxide Accumulation in Lakes

2015

We studied potential links between environmental factors, nitrous oxide (N2O) accumulation, and genetic indicators of nitrite and N2O reducing bacteria in 12 boreal lakes. Denitrifying bacteria were investigated by quantifying genes encoding nitrite and N2O reductases (nirS/nirK and nosZ, respectively, including the two phylogenetically distinct clades nosZ(I) and nosZ(II)) in lake sediments. Summertime N2O accumulation and hypolimnetic nitrate concentrations were positively correlated both at the inter-lake scale and within a depth transect of an individual lake (Lake Vanajavesi). The variability in the individual nirS, nirK, nosZ(I), and nosZ(II) gene abundances was high (up to tenfold) a…

Microbial community structure in soils with decomposing residues from plants with genetic modifications to lignin biosynthesis

2006

Lignin is a major determinant of the decomposition of plant materials in soils. Advances in transgenic technology have led to the possibility of modifying lignin to improve the pulping properties of plant materials for papermaking. Previous studies have shown that lignin modifications also affect the rate of plant material decay in soil. The aim of this work was to investigate short-term changes in soil microbial community structures when tobacco residues with reduced activity of enzymes in the monolignol pathway decompose. The residues from lignin-modified plants all decomposed faster than unmodified plant materials. The relative proportions of some of the structural groups of microbial ph…

The impact of long-term water level draw-down on microbial biomass : A comparative study from two peatland sites with different nutrient status

2017

We examined the effects of long-term (51 years) drainage on peat microbial communities using phospholipid fatty acid (PLFA) analysis. We analysed the peat profiles of natural and adjacent drained fen and bog sites. Viable microbes (i.e. microbial PLFA) were present in relatively large amounts even in the deepest peat layers of both peatland sites, a finding that warrants further investigation. Microbial biomass was generally higher in the fen than in the bog. Microbial community structure (indexed from PLFA) differed between the fen and bog sites and among depths. Although we did not exclude other factors, the effect of drainage on the total microbial biomass and community structure was not…

High salinity wastewater treatment by membrane bioreactors

2020

Abstract This chapter reviews the state of the art regarding the use of membrane bioreactor (MBR) systems for saline wastewater treatment. In particular, a comprehensive review is presented discussing the most adopted MBR configurations for the treatment of saline wastewater. Further, the chapter discusses the main effects of salinity on the biological performance, kinetic parameters, fouling development, sludge rheological features, and greenhouse gas (GHG) production. Literature results show that there is a significant effect of the salinity (and/or salinity variations) on the biological performance and membrane filtration. Specifically, it was found that a gradual salinity increase, carr…

Diversity and composition of the microbiome associated with eggs of the Southern green stinkbug, Nezara viridula (Hemiptera: Pentatomidae).

2022

Although microbial communities of insects from larval to adult stage have been increasingly investigated in recent years, little is still known about the diversity and composition of egg-associated microbiomes. In this study, we used high-throughput amplicon sequencing and quantitative PCR to get a better understanding of the microbiome of insect eggs and how they are established using the Southern green stinkbug Nezara viridula (L.) (Hemiptera: Pentatomidae) as a study object. First, to determine the bacterial community composition, egg masses from two natural populations in Belgium and Italy were examined. Subsequently, microbial community establishment was assessed by studying stinkbug e…

Influence of ferric iron dosing on aerobic granular sludge: granule formation, nutrient removal and microbial community

2021

BACKGROUND: Three lab-scale sequencing batch reactors were used to investigate the effects of Fe3+ on aerobic granular sludge (AGS) formation, nutrient removal, and microbial community. RESULTS: The addition of 6 and 12 mg Fe3+ L−1 could not shorten the granulation time. However, compared to the reactor without Fe3+ addition (average sludge volume index at 30 min (SVI30) 70.8 mL g−1; stable average particle size 548 μm), the addition of 12 mg Fe3+ L−1 helped improve the physical properties of AGS (average SVI30 57.0 mL g−1; stable average particle size 1067 μm). Furthermore, with 12 mg Fe3+ L−1 addition (Fe3+ to PO43−-P molar ratio = 1.33), effective removal of NH4+-N (≤0.5 mg L−1) and PO43…

Link between microbial diversity, stability of microbial communities and soil organic matter turnover

2014

Soil microbial communities act as important agents of the biological soil functioning, particularly through their involvements in the transformations of biogeochemical cycles (C, N, P…). In agro-ecosystems, the diversity of these communities is affected by perturbations associated to agricultural practices, and the significance of these modifications in terms of preservation of biological functioning and sustainability of agricultural systems has emerged as a central issue in the environmental sciences. Whereas the role of biodiversity has been well studied for macroorganisms, in particular for plants; the biodiversity/activity relationship is still largely unknown for soil microorganisms. …

Metabolic responses of microbial community in soil amended with fresh leaves and leaf extracts from eucalyptus spp.

Field observations reveal that often large areas of soil surface beneath Eucalyptus occidentalis Endl. are completely bare or with scant vegetation. Moreover, previous studies have showed that other species of Eucalyptus, such as Eucalyptus camaldulensis Dehn, may be effective in suppressing seed germination and weed growth. Such effects have been ascribed to the large number of secondary metabolites within Eucalyptus leaves. Due to their inhibition activity against weeds, leaf extracts might be used for an integrated weed management context, in accordance with the Directive 2009/128/EC. Several studies exist about the effects of Eucalyptus leaf extracts on weeds, whereas they are lacking o…

Origins of the blemishes of potato tubers : from the soil microbiology to the pedoclimatic environment

2010

The visual quality of fresh potatoes, Solanum tuberosum, became a dominant criterion and a significative economical issue in potato market. According the vegetative reproduction of this species, requirements for visual quality are also needed for potato seed tubers. As an organ for reserve and propagation, the tuber grows underground and is in contact with soil-borne microorganisms, making it potentially exposed to blemishes, for the majority of which the origin is still unclear. The objective of this work is to make an inventory of those tuber blemishes, to characterize them and determine their causes. After the establishment of consensual nomenclature and classification of the blemishes, …

Depth matters : Effects of precipitation regime on soil microbial activity upon rewetting of a plant-soil system

2018

International audience; Climate change is predicted to affect not only the amount but also the temporal distribution of rain. Changes in frequency and amplitude of rain events, i.e. precipitation patterns, result in different water conditions with soil depth, and likely affect plant growth and shape plant and soil microbial activity. Here, we used 18O stable isotope probing (SIP) to investigate bacterial and fungal communities that actively grew or not upon rewetting, at three different depths in plant-soil mesocosms previously subjected to frequent or infrequent watering for 12 weeks (equal total water input). Phylogenetic marker genes for bacteria and fungi were sequenced after rewetting,…