Search results for "microbial"

showing 10 items of 2041 documents

Infectious transfer of a fertility factor inStreptomyces coelicolor

1973

SUMMARYInitial Fertility (IF) strains ofStreptomyces coelicolorare able to convert recipient strains (UF) to the IF condition by contact, without concomitant transfer of chromosomal markers. The conversion is prevented by the presence of acridine orange in the medium of the mixed culture. Acridine orange is also moderately effective in inducing the formation of UF variants from IF-treated strains. No effect of the drug is observed on UF variant formation from Normal Fertility (NF) strains nor on the behaviour of the fertility factor in NF × UF mixed cultures. The hypothesis is put forward that the fertility factor works as an episome inS. coelicolor, fixed to the chromosome in the NF strain…

Genetics MicrobialGeneticsFertility factor (bacteria)biologymedia_common.quotation_subjectStreptomyces coelicolorAcridine orangeChromosomeFertilityGeneral MedicineNormal fertilitybiology.organism_classificationStreptomyceschemistry.chemical_compoundFertilitychemistryMixed cultureGeneticsCrossing Over GeneticAllelesmedia_commonGenetical Research
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An operon for histidine biosynthesis in Streptomyces coelicolor

1973

On the assumption that a cluster of five his genes (eight cistrons) in S. coelicolor corresponds to an operon, a genetic analysis of a constitutive mutant was carried out. This strain has a multi-site mutation localized at the (conventional) right end of the his cluster and is derepressed for at least two enzymes coded by genes of the cluster. The study of suitable heterozygous clones (heteroclones), showed the mutation to be cis-dominant, suggesting that the operator region is affected. Most likely the strain has a deletion connecting the his operon to an adjacent amm (ammonium requirement) operon as demonstrated by its inability to utilize nitrate as nitrogen source and to complement or r…

Genetics MicrobialHeterozygoteOperator (biology)Genetic LinkageOperonBiologyGenetic analysisOperonGeneticsHistidineAminesMolecular BiologyGeneAllelesCrosses GeneticGenes Dominantchemistry.chemical_classificationGeneticsNitratesStrain (chemistry)Streptomyces coelicolorChromosome MappingDrug Resistance Microbialbiology.organism_classificationStreptomycesQuaternary Ammonium CompoundsButyratesEnzymechemistryMutation (genetic algorithm)Molecular and General Genetics MGG
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A genome-scale study of metabolic complementation in endosymbiotic consortia: the case of the cedar aphid

2017

AbstractBacterial endosymbionts and their insect hosts establish an intimate metabolic relationship. Bacteria offer a variety of essential nutrients to their hosts, whereas insect cells provide the necessary sources of matter and energy to their tiny metabolic allies. These nutritional complementations sustain themselves on a diversity of metabolite exchanges between the cell host and the reduced yet highly specialized bacterial metabolism –which, for instance, overproduces a small set of essential amino acids and vitamins. A well-known case of metabolic complementation is provided by the cedar aphidCinara cedrithat harbors two co-primary endosymbionts,Buchnera aphidicolaBCc andCa.Serratia …

Genetics0303 health sciences030306 microbiologySystems biologyIn silicoMicrobial metabolismMetabolic networkBiologybiochemical phenomena metabolism and nutritionbiology.organism_classificationGenomeComplementation03 medical and health sciencesMetabolic pathwayBuchnera030304 developmental biology
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Interactions between the yeast mitochondrial and nuclear genomes: isogenic suppressive and hypersuppressive petites differ in their resistance to the…

1990

In a previous paper we have shown that the alkaloid lycorine inhibits growth of rho+, mit- and rho-, strains of Saccharomyces cerevisiae, whereas strains devoid of mitochondrial DNA (rho degrees) are resistant to more than 200 micrograms/ml of the alkaloid. In this report we show that hypersuppressive petites are almost as resistant as rho degrees mutants, whereas isogenic rho- petites, which have retained longer segments of the genome, are sensitive to the drug.

GeneticsMitochondrial DNAMutationbiologyAlkaloidSaccharomyces cerevisiaeMutantDrug Resistance MicrobialSaccharomyces cerevisiaeGeneral Medicinebiology.organism_classificationLycorinemedicine.disease_causeDNA MitochondrialMolecular biologyGenomeYeastPhenanthridineschemistry.chemical_compoundchemistryAmaryllidaceae AlkaloidsGeneticsmedicineDNA FungalCurrent Genetics
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Prisoner's dilemma in an RNA virus

1999

The evolution of competitive interactions among viruses1 was studied in the RNA phage φ6 at high and low multiplicities of infection (that is, at high and low ratios of infecting phage to host cells). At high multiplicities, many phage infect and reproduce in the same host cell, whereas at low multiplicities the viruses reproduce mainly as clones. An unexpected result of this study1 was that phage grown at high rates of co-infection increased in fitness initially, but then evolved lowered fitness. Here we show that the fitness of the high-multiplicity phage relative to their ancestors generates a pay-off matrix conforming to the prisoner's dilemma strategy of game theory2,3. In this strateg…

GeneticsMultidisciplinarybiologyvirusesmedia_common.quotation_subjectRNARNA virusPrisoner's dilemmaVirus Replicationbiology.organism_classificationBiological EvolutionModels BiologicalVirusCystovirusBacteriophage phi 6BacteriophageGame TheoryMutationMicrobial cooperationSelfishnessmedia_commonNature
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Construction of a Trp commercial baker?s yeast strain by using food-safe-grade dominant drug resistance cassettes

2003

We have designed a food-safe-grade module for gene disruptions in commercial baker's yeast strains, which contains the G418 resistance cassette, KanMX4, flanked by direct repeats from the MEL1 gene of Saccharomyces cerevisiae. This module was used to obtain a Trp(-) auxotrophic mutant of the polyploid HY strain by successive targeting to the TRP1 locus and later in vivo excision of the kan(r) marker. Southern blot analysis indicated that HY contains five copies of the TRP1 gene. However, after four disruption rounds, a strain named HYtrpM(4), unable to grow in the absence of tryptophan, was selected. Southern and Northern analysis of HYtrpM(4) cells showed that a remaining functional wild-t…

GeneticsSaccharomyces cerevisiae ProteinsIsomerase activitybiologyGenes FungalSaccharomyces cerevisiaeDrug Resistance MicrobialSaccharomyces cerevisiaeGeneral Medicinebiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyMolecular biologyYeastFungal ProteinsTransformation GeneticPlasmidFood TechnologyDirect repeatGene conversionGeneAldose-Ketose IsomerasesBiotechnologyPlasmidsSouthern blotFEMS Yeast Research
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Comparative Genomics of Serratia spp.: Two Paths towards Endosymbiotic Life

2012

Symbiosis is a widespread phenomenon in nature, in which insects show a great number of these associations. Buchnera aphidicola, the obligate endosymbiont of aphids, coexists in some species with another intracellular bacterium, Serratia symbiotica. Of particular interest is the case of the cedar aphid Cinara cedri, where B. aphidicola BCc and S. symbiotica SCc need each other to fulfil their symbiotic role with the insect. Moreover, various features seem to indicate that S. symbiotica SCc is closer to an obligate endosymbiont than to other facultative S. symbiotica, such as the one described for the aphid Acirthosyphon pisum (S. symbiotica SAp). This work is based on the comparative genomi…

Genome evolutionEvolutionary ProcessesSerratialcsh:MedicineGenomicsBiologyForms of EvolutionGenomeMicrobiologyEvolution Molecular03 medical and health sciencesBuchneraPhylogeneticsAnimalslcsh:ScienceSymbiosisGenome sizeBiologyGenome EvolutionPhylogeny030304 developmental biologyGeneticsComparative genomics0303 health sciencesEvolutionary BiologyMultidisciplinaryObligate030306 microbiologylcsh:RComputational BiologyGenomicsComparative Genomicsbiology.organism_classificationAphidsMicrobial Evolutionlcsh:QBuchneraGenome BacterialResearch ArticleCoevolutionPLoS ONE
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Genomic instability in an interspecific hybrid of the genus Saccharomyces: a matter of adaptability

2020

Ancient events of polyploidy have been linked to huge evolutionary leaps in the tree of life, while increasing evidence shows that newly established polyploids have adaptive advantages in certain stress conditions compared to their relatives with a lower ploidy. The genus Saccharomyces is a good model for studying such events, as it contains an ancient whole-genome duplication event and many sequenced Saccharomyces cerevisiae are, evolutionary speaking, newly formed polyploids. Many polyploids have unstable genomes and go through large genome erosions; however, it is still unknown what mechanisms govern this reduction. Here, we sequenced and studied the natural S. cerevisiae × Saccharomyces…

Genome instabilityNuclear geneDNA Copy Number VariationsPopulationGene DosageHybridsWineGenome instabilityadaptationSaccharomyces cerevisiaeBiologyGenomeGenomic InstabilityPolyploidy03 medical and health sciencesSaccharomycesCopy-number variationAdaptationeducation030304 developmental biologyhybridsresequencing0303 health scienceseducation.field_of_study030306 microbiologyChimeraGeneral MedicineGenomicsSequence Analysis DNAbiology.organism_classificationgenome instabilityEvolutionary biologyEpistasisPloidyMicrobial evolution and epidemiology: Mechanisms of evolutionSaccharomyces kudriavzeviiGenome FungalSaccharomyces kudriavzeviiResequencingResearch ArticleMicrobial Genomics
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Identification of subdominant sourdough lactic acid bacteria and their evolution during laboratory-scale fermentations

2007

Abstract Presumptive lactic acid bacterial cocci were found in six sourdoughs (out of 20) from the Abruzzo region (central Italy) and subjected to phenotypic and genotypic characterization. A total of 21 isolates, recognized as seven strains by randomly amplified polymorphic DNA (RAPD)–polymerase chain reaction (PCR) typing, were identified by a polyphasic approach, consisting of 16S rRNA gene sequencing, multiplex PCR assays and physiological features, as Enterococcus faecium and Pediococcus pentosaceus. Four strains belonging to those species and previously isolated from wheat kernels were inoculated in sterile flour to verify their capacity to grow in sourdough environment. Doughs with s…

GenotypeColony Count MicrobialLactobacillus sanfranciscensisMicrobiologyMicrobiologychemistry.chemical_compoundSpecies SpecificityRNA Ribosomal 16Sco-fermentazioni batteri lattici sottodominantiMultiplex polymerase chain reactionPediococcusTypingPhylogenybiologyfood and beveragesBreadHydrogen-Ion Concentrationbiology.organism_classificationRandom Amplified Polymorphic DNA TechniqueRAPDLactic acidLactobacillusRNA BacterialPhenotypechemistryFermentationFood MicrobiologyFermentationEnterococcusBacteriaFood ScienceEnterococcus faeciumFood Microbiology
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Evidence of Recombination in Intrapatient Populations of Hepatitis C Virus.

2008

Hepatitis C virus (HCV) is a major cause of liver disease worldwide and a potential cause of substantial morbidity and mortality in the future. HCV is characterized by a high level of genetic heterogeneity. Although homologous recombination has been demonstrated in many members of the family Flaviviridae, to which HCV belongs, there are only a few studies reporting recombination on natural populations of HCV, suggesting that these events are rare in vivo. Furthermore, these few studies have focused on recombination between different HCV genotypes/subtypes but there are no reports on the extent of intra-genotype or intra-subtype recombination between viral strains infecting the same patient.…

GenotypeHepatitis C virusHepacivirusPublic Health and Epidemiology/Infectious Diseaseslcsh:MedicineHepacivirusVirology/Immune Evasionmedicine.disease_causeAntiviral AgentsGenetics and Genomics/Population GeneticsGenotypemedicineNS5Alcsh:SciencePhylogenyRecombination GeneticGeneticsLikelihood FunctionsGenomeMultidisciplinaryModels GeneticbiologyGenetic heterogeneitylcsh:RGenetic Variationvirus diseasesRNA virusbiology.organism_classificationGenetics and Genomics/Microbial Evolution and GenomicsVirologyVirology/Virus Evolution and Symbiosislcsh:QComputational Biology/Population GeneticsHomologous recombinationAlgorithmsSoftwareRecombinationResearch Article
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