Search results for "microbiology"

showing 10 items of 7546 documents

Cellular Injuries in Cronobacter sakazakii CIP 103183T and Salmonella enterica Exposed to Drying and Subsequent Heat Treatment in Milk Powder

2018

International audience; Because of the ability of foodborne pathogens to survive in low-moisture foods, their decontamination is an important issue in food protection. This study aimed to clarify some of the cellular mechanisms involved in inactivation of foodborne pathogens after drying and subsequent heating. Individual strains of Salmonella Typhimurium, Salmonella Senftenberg, and Cronobacter sakazakii were mixed into whole milk powder and dried to different water activity levels (0.25 and 0.58); the number of surviving cells was determined after drying and subsequent thermal treatments in closed vessels at 90 and 100 degrees C, for 30 and 120 s. For each condition, the percentage of unc…

0301 basic medicineSalmonellalcsh:QR1-502medicine.disease_causelcsh:Microbiologyperméabilité membranairechemistry.chemical_compound[SDV.IDA]Life Sciences [q-bio]/Food engineeringFood sciencedryingOriginal Researchpropidium iodidebiologyChemistryMicrobiology and Parasitologyplasma-membraneSalmonella entericainfant formulaMicrobiologie et ParasitologieSalmonella entericaAlimentation et Nutritionsaccharomyces-cerevisiaeenterobacter-sakazakiitraitement thermiqueséchageMicrobiology (medical)Water activityMembrane permeabilitydesiccation tolerance030106 microbiologylow-water activityMicrobiologyrespiratory activity03 medical and health sciencesCronobacter sakazakiimedicineFood and NutritionPropidium iodideactivation respiratoireEscherichia colifoodborne pathogensheat treatmentbiology.organism_classificationCronobacter sakazakii030104 developmental biologymembrane permeabilitythermal inactivationSalmonella enterica;Cronobacter sakazakii;membrane permeability;respiratory activity;heat treatment;dryingescherichia-coliBacteria
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Sterilization of macroscopic poly(l-lactic acid) porous scaffolds withdense carbon dioxide: Investigation of the spatial penetration of thetreatment …

2016

Abstract In this work the sterilization with dense carbon dioxide of poly( l -lactic acid) (PLLA) porous scaffolds intended for tissue engineering applications was investigated with the main objective of confirming the three-dimensional efficacy of the treatment and of analysing the scaffold properties after CO2 treatment. For this purpose the scaffold was contaminated with a conventional bacterium (Escherichia coli) and with spores (Streptomyces coelicolor), a species more fascinating and difficult to inactivate. Contamination was performed in such a way to soak the whole matrix with bacteria and spores. The effect of pressure and treatment time on the efficacy of the sterilization was eva…

0301 basic medicineScaffoldBiocompatibilityGeneral Chemical Engineering030106 microbiologyNanotechnology02 engineering and technology03 medical and health scienceschemistry.chemical_compoundTissue engineeringPhysical and Theoretical ChemistrySettore ING-IND/24 - Principi Di Ingegneria ChimicabiologyChemistryPenetration (firestop)Sterilization (microbiology)021001 nanoscience & nanotechnologyCondensed Matter Physicsbiology.organism_classificationDense carbon dioxide Sterilization PLLA scaffolds E. coli S. coelicolor BiocompatibilitySupercritical fluidLactic acidChemical engineering0210 nano-technologyBacteria
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Health and Disease Imprinted in the Time Variability of the Human Microbiome

2017

The human microbiota correlates closely with the health status of its host. This article analyzes the microbial composition of several subjects under different conditions over time spans that ranged from days to months. Using the Langevin equation as the basis of our mathematical framework to evaluate microbial temporal stability, we proved that stable microbiotas can be distinguished from unstable microbiotas. This initial step will help us to determine how temporal microbiota stability is related to a subject’s health status and to develop a more comprehensive framework that will provide greater insight into this complex system.

0301 basic medicineScaling lawPhysiologySystems biologyPopulationlcsh:QR1-502microbiomeDiseaseGut floraBiochemistryMicrobiologylcsh:MicrobiologyHost-Microbe Biology03 medical and health sciences0302 clinical medicineGeneticsMicrobiomeeducationMolecular BiologyEcology Evolution Behavior and Systematicseducation.field_of_studymetagenomicsbiologyHuman microbiomesystems biologystabilitybiology.organism_classificationEditor's PickQR1-502Computer Science Applications030104 developmental biologyEvolutionary biologyMetagenomicsModeling and Simulationecological modeling030217 neurology & neurosurgeryResearch ArticlemSystems
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The sphingosine kinase 1 activator, K6PC-5, attenuates Ebola virus infection

2021

Summary Ebola virus (EBOV) is responsible for outbreaks with case fatality rates of up to 90% and for an epidemic in West Africa with more than ten thousand deaths. EBOV glycoprotein (EBOV-GP) is the only viral surface protein and is responsible for viral entry into cells. Here, by employing pseudotyped EBOV-GP viral particles, we uncover a critical role for sphingolipids in inhibiting viral entry. Sphingosine kinase 1 (SphK1) catalyzes the phosphorylation of sphingosine to sphingosine 1-phosphate (S1P). The administration of the SphK1 activator, K6PC-5, or S1P, or the overexpression of SphK1 consistently exhibited striking inhibitory effects in EBOV-GP-driven entry in diverse cell lines. F…

0301 basic medicineScienceviruses02 engineering and technologymedicine.disease_causeArticle03 medical and health scienceschemistry.chemical_compoundViral entryVirologymedicinechemistry.chemical_classificationMultidisciplinaryEbola virusSphingosinebiologyActivator (genetics)QMolecular MicrobiologyCell Biology021001 nanoscience & nanotechnologyVirologySphingolipid030104 developmental biologychemistrySphingosine kinase 1Cell culturebiology.protein0210 nano-technologyGlycoproteiniScience
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Gene expression changes after parental exposure to metals in the sea urchin affect timing of genetic programme of embryo development

2021

Simple Summary Intergenerational and transgenerational effects, in which exposure to stressors in a parental generation affects the phenotype of the offspring have been connected to anthropic impacts on biological systems. Therefore, environmental stress experienced inside a generation, particularly during gametogenesis, may lead to erroneous patterns in their offspring just emerging at early developmental stages. In this scenario, the sea urchin embryo represents a suitable model for integrating analyses of gene expression through embryogenesis with developmental alteration induced by environmental stressors. Herein we provide pieces of evidence for the alteration of the gene regulatory ne…

0301 basic medicineSea urchinanimal structuresOffspringIntergenerational effectsSettore BIO/11 - Biologia Molecolare010501 environmental sciencesEmbryo development01 natural sciencesArticleGeneral Biochemistry Genetics and Molecular BiologyAndrology03 medical and health sciencesbiology.animalGene expressionParental exposureEpigeneticslcsh:QH301-705.5GeneSea urchin0105 earth and related environmental sciencesGeneral Immunology and MicrobiologybiologyEmbryogenesisEmbryoPhenotype030104 developmental biologyGene expression profileslcsh:Biology (General)embryonic structuressea urchin; redox homeostasis; parental exposure; intergenerational effects; embryo development; gene expression profilesGeneral Agricultural and Biological SciencesEmbryo development Gene expression profiles Intergenerational effects Parental exposure Redox homeostasis Sea urchinRedox homeostasis
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Performances of Different Metabolic Lactobacillus Groups During the Fermentation of Pizza Doughs Processed from Semolina

2018

The main hypothesis of this work is that facultative and obligate heterofermentative Lactobacillus species can differently impact the final characteristics of pizza. The objective was to evaluate separately the behaviors of the obligate heterofermentative species (OHS), such as Lactobacillus sanfranciscensis, Lactobacillus brevis, and Lactobacillus rossiae, and the facultative heterofermentative species (FHS), including Lactobacillus plantarum, and Lactobacillus curvatus, in the sourdoughs to be used for pizza production. The production of the experimental pizzas was carried out with semolina (Triticum turgidum L. ssp. durum). The acidification process—which was followed by pH, total titrat…

0301 basic medicineSeasoningsourdough fermentationfacultative heterofermentative species030106 microbiologyLactobacillus sanfranciscensisTitratable acidPlant ScienceBiochemistry Genetics and Molecular Biology (miscellaneous)03 medical and health scienceschemistry.chemical_compoundLactobacilluspizzavolatile organic compoundsFood scienceobligate heterofermentative specieobligate heterofermentative specieslcsh:TP500-660biologyfacultative heterofermentative speciefood and beveragesSettore AGR/15 - Scienze E Tecnologie Alimentaribiology.organism_classificationlcsh:Fermentation industries. Beverages. AlcoholLactic acidlactic acid bacteriachemistryFermentationshape descriptorshape descriptorsBacteriaLactobacillus plantarumFood ScienceSettore AGR/16 - Microbiologia Agraria
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The seed endosphere of Anadenanthera colubrina is inhabited by a complex microbiota, including Methylobacterium spp. and Staphylococcus spp. with pot…

2018

Background and aims: Plant seeds are emerging micro–habitats, whose importance as reservoir and vector of beneficial microbes just begins to be recognized. Here we aimed to characterize the bacterial microbiota of the Anadenanthera colubrina seed endosphere, with special focus to beneficial traits and to the colonization pattern. Methods: Cultivation–dependent (isolation from surface–sterilized seeds) and cultivation–independent (pyrosequencing of 16S rRNA gene from metagenomic seed DNA) analyses, functional tests and microscopical investigations (fluorescence in situ hybridization coupled with confocal laser scanning microscopy (FISH-CLSM) were performed. Results: We isolated several Methy…

0301 basic medicineSeed endophyteFirmicutesFluorescence in situ hybridization–confocal laser scanning microscopy (FISH–CLSM)Beneficial plant–microbe interactionsSeed endophytesSoil SciencePlant ScienceMicrobiology03 medical and health sciencesBotanyColonizationbiologyAlphaproteobacteriafood and beveragesPyrosequencingPlant growth promoting activitiebiology.organism_classificationFluorescence in situ hybridization and confocal laser scanning microscopy (FISH and CLSM)Plant growth promoting activitiesBeneficial plant–microbe interaction030104 developmental biologyBeneficial plant-microbe interactionDelftiaPlant microbiotaMethylobacteriumPyrosequencingAnadenanthera colubrinaSettore BIO/19 - MICROBIOLOGIA GENERALEActinomyces
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p53 and p53-related mediators PAI-1 and IGFBP-3 are downregulated in peripheral blood mononuclear cells of HIV-patients exposed to non-nucleoside rev…

2019

The improved effectiveness and safety of the combined antiretroviral therapy (cART) has largely diminished mortality and AIDS-defining morbidity of HIV-patients. Nevertheless, chronic age-related diseases in these individuals are more common and their underlying pathogenic mechanisms of these actions seem to involve accelerated aging and enhanced inflammation. The present study explores markers of these processes in a heterogenous Spanish HIV cohort using peripheral blood samples of HIV-patients and matched uninfected controls. We isolated periheral blood mononuclear cells (PBMCs) and i) compared the expression of a panel of 14 genes related to inflammation and senescence in PBMCs of HIV-pa…

0301 basic medicineSenescenceAdultMaleAnti-HIV Agents030106 microbiologyDown-RegulationInflammationHIV InfectionsCCL2Peripheral blood mononuclear cell03 medical and health sciencesVirologyAntiretroviral Therapy Highly ActivePlasminogen Activator Inhibitor 1medicineCXCL10HumansCellular SenescencePharmacologyInflammationbusiness.industryInterleukin-6Interleukin-18virus diseasesMiddle AgedCCL20Chemokine CXCL10030104 developmental biologyInsulin-Like Growth Factor Binding Protein 3ImmunologyLeukocytes MononuclearReverse Transcriptase InhibitorsInterleukin 18Tumor necrosis factor alphaFemalemedicine.symptomTumor Suppressor Protein p53businessAntiviral research
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Saccharomyces uvarum is responsible for the traditional fermentation of apple chicha in Patagonia

2016

Apple chicha is a fresh low alcoholic beverage elaborated by aboriginal communities of Andean Patagonia (Argentina and Chile). In the present work, we identified the yeast microbiota associated with this fermentation, and characterized genetically those belonging to the genus Saccharomyces. Both Saccharomyces cerevisiae and S. uvarum were found in the analyzed fermentations. Phylogenetic and population structure analyses based on genes sequence analysis were carried out for both S. cerevisiae and S. uvarum strains obtained in this study and a set of additional strains from diverse origins. The results demonstrate that S. cerevisiae strains from apple chicha belong to the big group of wine/E…

0301 basic medicineSequence analysis030106 microbiologySaccharomyces cerevisiaePopulationArgentinaINGENIERÍAS Y TECNOLOGÍASAdmixtureApplied Microbiology and BiotechnologyMicrobiologyBiotecnología IndustrialSaccharomyces03 medical and health sciencesBotanyChileDNA FungalDomesticationeducationPhylogenyWineeducation.field_of_studyPhylogenetic treebiologyAlcoholic BeveragesMapuche//purl.org/becyt/ford/2.9 [https]Sequence Analysis DNAGeneral MedicineSouth Americabiology.organism_classificationYeastHolartic//purl.org/becyt/ford/2 [https]MalusFermentationFermentationYeast Diversity
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Validation and implementation of a commercial real-time PCR assay for direct detection of Candida auris from surveillance samples.

2021

Background Rapid and reliable laboratory methods are required for detecting the nosocomial yeast Candida auris. AurisID® (Olm Diagnostics, England) is a real-time PCR assay approved for detecting C. auris in fungal cultures as well as directly from blood samples, involving a nucleic acid extraction as a prior step. Objectives The purpose of this study is to validate the AurisID® kit for direct detection of C. auris from surveillance samples without prior DNA extraction and to analyze the results of implementing this methodology to our daily laboratory routine protocol for C. auris surveillance studies. Methods Our PCR method using the AurisID® kit was compared with our routine protocol, con…

0301 basic medicineSerial dilution030106 microbiologyPcr assayDermatologyReal-Time Polymerase Chain ReactionSensitivity and Specificity030207 dermatology & venereal diseases03 medical and health sciences0302 clinical medicineLimit of DetectionTransport mediumMedicineHumansDNA FungalCandidaDetection limitCross InfectionChromatographybusiness.industryDiagnostic Tests RoutineCandidiasisGeneral MedicineDNA extractionInfectious DiseasesReal-time polymerase chain reactionCandida aurisMolecular Diagnostic TechniquesEpidemiological MonitoringPcr methodbusinessMycosesREFERENCES
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