Search results for "microbiota"

showing 10 items of 500 documents

The impact of liquid-pressurized extracts of Spirulina, Chlorella and Phaedactylum tricornutum on in vitro antioxidant, antiinflammatory and bacteria…

2022

The impact of Spirulina, Chlorella and Phaeodactylum tricornutum (P. tricornutum) microalgal extracts obtained by pressurized liquid extraction (PLE) on antioxidant and anti-inflammatory activities, microbial growth and in vitro gut microbiota composition was evaluated. PLE, compared to conventional extraction, led to a significant (p < 0.05) increase in proteins, carbohydrates, polyphenols, and antioxidant capacities of the three microalgal extracts. Moreover, Spirulina and P. tricornutum extracts significantly (p < 0.05) reduced the in vitro activation of the inflammatory NF-κB pathway. The microalgal extracts had also an inhibitory effect on the pathogenic bacteria while potential benefi…

PolyphenolSCFAsBacteriaPLEProbioticsAnti-bacteriaNF-kappa BAnti-Inflammatory AgentsCarbohydratesGeneral MedicineChlorellaGut microbiotaFatty Acids VolatileAntioxidantsAnalytical ChemistryGastrointestinal MicrobiomeAlguesSpirulinaMicroalgaeHumansMicroalgalFood ScienceAntiinflamatoris
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Evaluation of Changes in Gut Microbiota in Patients with Crohn’s Disease after Anti-Tnfα Treatment: Prospective Multicenter Observational Study

2020

Background: Crohn’s disease is believed to result from the interaction between genetic susceptibility, environmental factors and gut microbiota, leading to an aberrant immune response. The objectives of this study are to evaluate the qualitative and quantitative changes in the microbiota of patients with Crohn’s disease after six months of anti-tumor-necrosis factor (anti-TNFα) (infliximab or adalimumab) treatment and to determine whether these changes lead to the recovery of normal microbiota when compared to a control group of healthy subjects. In addition, we will evaluate the potential role of the Faecalibacterium prausnitzii/Escherichia coli and Faecalibacterium prausnitzii/Clostridium…

Project ReportCrohn’s diseasemedicine.medical_specialtyanti-TNFαHealth Toxicology and MutagenesisFaecalibacterium prausnitziilcsh:MedicineDiseaseGut flora03 medical and health sciences0302 clinical medicineCrohn DiseaseInternal medicinemedicineAdalimumabEscherichia coli and Clostridium coccoides groupHumansProspective Studies030304 developmental biology0303 health sciencesCrohn's diseasebiologygut microbiotabusiness.industryFaecalibacterium prausnitziiTumor Necrosis Factor-alphalcsh:RPublic Health Environmental and Occupational Healthmedicine.diseasebiology.organism_classificationInfliximabGastrointestinal MicrobiomeDysbiosis030211 gastroenterology & hepatologyCalprotectinbusinessDysbiosismedicine.drugInternational Journal of Environmental Research and Public Health
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Pathogens and host immunity in the ancient human oral cavity.

2014

Calcified dental plaque (dental calculus) preserves for millennia and entraps biomolecules from all domains of life and viruses. We report the first high-resolution taxonomic and protein functional characterization of the ancient oral microbiome and demonstrate that the oral cavity has long served as a reservoir for bacteria implicated in both local and systemic disease. We characterize: (i) the ancient oral microbiome in a diseased state, (ii) 40 opportunistic pathogens, (iii) the first evidence of ancient human-associated putative antibiotic resistance genes, (iv) a genome reconstruction of the periodontal pathogen Tannerella forsythia, (v) 239 bacterial and 43 human proteins, allowing co…

ProteomeMolecular Sequence Data610 Medicine & health10071 Functional Genomics Center ZurichDental plaqueArticlePrehistòriaBacterial geneticsPeriodontal pathogenMicrobiology1311 GeneticsTandem Mass SpectrometryGermanyRNA Ribosomal 16SGeneticsmedicineTannerella forsythiaHumansDental CalculusMicrobiomePathogenPhylogenyMouthbiologyBase SequenceEcologyBacteroidetesMicrobiotaSequence Analysis DNAbiology.organism_classificationmedicine.diseaseRed complexHistory Medieval10182 Institute of Oral Biologystomatognathic diseasesArchaeology10076 Center for Integrative Human Physiology11294 Institute of Evolutionary Medicine570 Life sciences; biologyOral MicrobiomeFood AnalysisGenome BacterialNature genetics
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Art‐omics: multi‐omics meet archaeology and art conservation

2020

Summary Multi‐omics can informally be described as the combined use of high‐throughput techniques allowing the characterization of complete microbial communities by the sequencing/identification of total pools of biomolecules including DNA, proteins or metabolites. These techniques have allowed an unprecedented level of knowledge on complex microbial ecosystems, which is having key implications in land and marine ecology, industrial biotechnology or biomedicine. Multi‐omics have recently been applied to artistic or archaeological objects, with the goal of either contributing to shedding light on the original context of the pieces and/or to inform conservation approaches. In this minireview,…

ProteomicsComputer sciencelcsh:BiotechnologyBioengineeringContext (language use)Industrial biotechnologyApplied Microbiology and BiotechnologyBiochemistryConservation03 medical and health scienceslcsh:TP248.13-248.65HumansMetabolomicsBiomedicine030304 developmental biology0303 health sciences030306 microbiologybusiness.industryMicrobiotaMinireviewsOmicsArchaeologyArchaeologyMetagenomicsMulti omicsIdentification (biology)MetagenomicsMinireviewbusinessBiotechnologyMicrobial Biotechnology
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Analysis of the effects of microbiome-related confounding factors on the reproducibility of the volatolomic test.

2016

Volatile organic compound (VOC) testing in breath has potential in gastric cancer (GC) detection. Our objective was to assess the reproducibility of VOCs in GC, and the effects of conditions modifying gut microbiome on the test results. Ten patients with GC were sampled for VOC over three consecutive days; 17 patients were sampled before and after H. pylori eradication therapy combined with a yeast probiotic; 61 patients were sampled before and after bowel cleansing (interventions affecting the microbiome). The samples were analyzed by: (1) gas chromatography linked to mass spectrometry (GC-MS), applying the non-parametric Wilcoxon test (level of significance p    0.05); (2) by cross-reacti…

Pulmonary and Respiratory MedicineMalemedicine.medical_specialtyPathologyColonoscopyGastroenterologyGas Chromatography-Mass Spectrometrylaw.invention03 medical and health sciencesProbiotic0302 clinical medicinelawStomach NeoplasmsInternal medicinemedicineHumansMicrobiomeAgedAged 80 and overReproducibilityVolatile Organic Compoundsmedicine.diagnostic_testChemistryMicrobiotaConfoundingReproducibility of ResultsMiddle AgedRegimenBreath Tests030220 oncology & carcinogenesis030211 gastroenterology & hepatologyFemaleGas chromatographyGas chromatography–mass spectrometryJournal of breath research
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The Endometrial Microbiome and Its Impact on Human Conception

2021

Changes in the female genital tract microbiome are consistently correlated to gynecological and obstetrical pathologies, and tract dysbiosis can impact reproductive outcomes during fertility treatment. Nonetheless, a consensus regarding the physiological microbiome core inside the uterine cavity has not been reached due to a myriad of study limitations, such as sample size and experimental design variations, and the influence of endometrial bacterial communities on human reproduction remains debated. Understanding the healthy endometrial microbiota and how changes in its composition affect fertility would potentially allow personalized treatment through microbiome management during assisted…

QH301-705.5microbiomeReviewCatalysisInorganic ChemistryEndometriumreproductive tract microbiotaPregnancyHumansPhysical and Theoretical ChemistryBiology (General)Molecular BiologyQD1-999Spectroscopyendometrial microbiotaassisted reproductive technologiesVirulenceuterusMicrobiotaOrganic ChemistryPregnancy Outcomehuman reproductionGeneral MedicineComputer Science ApplicationsChemistryreproductive outcomesFertilizationDysbiosisFemaleinfertilityInternational Journal of Molecular Sciences
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Impact of probiotic Saccharomyces boulardii on the gut microbiome composition in HIV-treated patients: A double-blind, randomised, placebo-controlled…

2017

Dysbalance in gut microbiota has been linked to increased microbial translocation, leading to chronic inflammation in HIV-patients, even under effective HAART. Moreover, microbial translocation is associated with insufficient reconstitution of CD4+T cells, and contributes to the pathogenesis of immunologic non-response. In a double-blind, randomised, placebo-controlled trial, we recently showed that, compared to placebo, 12 weeks treatment with probiotic Saccharomyces boulardii significantly reduced plasma levels of bacterial translocation (Lipopolysaccharide-binding protein or LBP) and systemic inflammation (IL-6) in 44 HIV virologically suppressed patients, half of whom (n = 22) had immun…

RNA virusesMale0301 basic medicinePlacebo-controlled studylcsh:MedicineHIV InfectionsGut floraPathology and Laboratory MedicineSystemic inflammationlaw.inventionPlacebosProbiotic0302 clinical medicineImmunodeficiency ViruseslawMedicine and Health SciencesMedicinelcsh:ScienceImmune ResponseMultidisciplinarybiologyMicrobiotaGenomicsMiddle AgedProbiòticsBacterial PathogensIntestinesSaccharomyces boulardiiMedical MicrobiologyViral PathogensVirusesFemale030211 gastroenterology & hepatologyPathogensmedicine.symptomResearch ArticleSaccharomyces boulardiiAdultImmunologyMicrobial GenomicsMicrobiologySaccharomyces03 medical and health sciencesSigns and SymptomsImmune systemDouble-Blind MethodDiagnostic MedicineRetrovirusesGeneticsVIH (Virus)HumansMicrobiomeMicrobial PathogensInflammationClostridiumBacteriabusiness.industryProbioticsGut BacteriaLentivirusLachnospiraceaelcsh:ROrganismsFungiBiology and Life SciencesHIVbiology.organism_classificationYeast030104 developmental biologyImmunologylcsh:QMicrobiomebusinessPLoS ONE
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Analisi della comunità microbica intestinale di Reticulitermes lucifugus (Rossi) (Isoptera: Rhinotermitidae).

2009

L’intestino delle termiti ospita una comunità microbica di batteri e flagellati anaerobi, responsabile della degradazione del materiale lignocellulosico. La digestione della lignocellulosa da parte delle termiti dipende dalla simbiosi con microrganismi procarioti ed eucarioti che vivono nel loro intestino. I microrganismi trasformano la cellulosa in zuccheri e acetato, producendo idrogeno, metano e anidride carbonica. Abbiamo analizzato la comunità microbica intestinale di Reticulitermes lucifugus lucifugus, una delle due specie di termiti italiane, che vive in ambienti sotterranei, è distruttiva per le strutture legnose degli ambienti urbani causando seri danni ai monumenti storici e può c…

Reticulitermes lucifugulignocellulosamicrobiotaSettore BIO/19 - Microbiologia GeneraleR. lucifugus Microbiota DNA Metagenomico rDNA ARDRA
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Cancer and the microbiome : potential applications as new tumor biomarker

2015

Abstract: Microbial communities that colonize in humans are collectively described as microbiome. According to conservative estimates, about 15% of all types of neoplasms are related to different infective agents. However, current knowledge is not sufficient to explain how the microbiome contributes to the growth and development of cancers. Large and thorough studies involving colonized, diverse and complex microbiome entities are required to identify microbiome as a potential cancer marker and to understand how the immune system is involved in response to pathogens. This article reviews the existing evidence supporting the enigmatic association of transformed microbiome with the developmen…

RiskComputational biologyBiologycancer biomarkerImmune systemcancer diagnosisNeoplasmstransformed microbiomemedicineBiomarkers TumorAnimalsHumansPharmacology (medical)Microbiomecancer biomarker; cancer diagnosis; cancer prevention; immunological modification; transformed microbiome; Animals; Biomarkers; Tumor; Humans; Neoplasms; Risk; Microbiota; Oncology; Pharmacology (medical)Cancer markercancer diagnosiimmunological modificationCancer preventionTumorcancer preventionAnimalMicrobiotaCancermedicine.diseaseBiomarkercancer biomarker; cancer diagnosis; cancer prevention; immunological modification; transformed microbiome; Animals; Biomarkers Tumor; Humans; Neoplasms; Risk; Microbiota; Oncology; Pharmacology (medical)OncologyImmunologyNeoplasmHuman medicineBiomarkersHumanExpert review of anticancer therapy
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Microbiota Depletion Promotes Human Rotavirus Replication in an Adult Mouse Model

2021

Intestinal microbiota-virus-host interaction has emerged as a key factor in mediating enteric virus pathogenicity. With the aim of analyzing whether human gut bacteria improve the inefficient replication of human rotavirus in mice, we performed fecal microbiota transplant (FMT) with healthy infants as donors in antibiotic-treated mice. We showed that a simple antibiotic treatment, irrespective of FMT, resulted in viral shedding for 6 days after challenge with the human rotavirus G1P[8] genotype Wa strain (RVwa). Rotavirus titers in feces were also significantly higher in antibiotic-treated animals with or without FMT but they were decreased in animals subject to self-FMT, where a partial re…

Rotavirus0301 basic medicinePermissivenessmiceQH301-705.5Virus RNA030106 microbiologyPopulationMicrobiologiaMedicine (miscellaneous)Antibiòticsmedicine.disease_causeGeneral Biochemistry Genetics and Molecular BiologyVirusArticlevirus sheddingMicrobiologyMice03 medical and health sciencesAntigenAntibioticsRotavirusLactobacillusantibioticmedicinemicrobiotaBiology (General)Viral sheddingeducationFecesInfectivityeducation.field_of_studyInnate immune systembiologyMicrobiotaVirus sheddingbiology.organism_classificationSmall intestine030104 developmental biologymedicine.anatomical_structurerotavirusBiomedicines
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