Search results for "microorganism"
showing 10 items of 449 documents
Microbial diversity in a thermophilic aerobic biofilm process: analysis by length heterogeneity PCR (LH-PCR).
2003
A two-stage pilot-scale thermophilic aerobic suspended carrier biofilm process (SCBP) was set up for the on-site treatment of pulp and paper mill whitewater lining. The microbial diversity in this process was analyzed by length heterogeneity analysis of PCR-amplified 16S ribosomal DNA. The primer pair selected for PCR amplification was first evaluated by a computational analysis of fragment lengths in ten main phylogenetical eubacterial groups. The fragment contained the first third of the 16S rRNA gene, which was shown to vary naturally between 465 and 563 bp in length. The length heterogeneity analysis of polymerase chain reaction (LH-PCR) profile of the biomass attached to carrier elemen…
Comparison of different primer sets for use in Automated Ribosomal Intergenic Spacer Analysis of complex bacterial communities.
2004
ABSTRACT ITSF and ITSReub, constituting a new primer set designed for the amplification of the 16S-23S rRNA intergenic transcribed spacers, have been compared with primer sets consisting of 1406F and 23Sr (M. M. Fisher and E. W. Triplett, Appl. Environ. Microbiol. 65:4630-4636, 1999) and S-D-Bact-1522-b-S-20 and L-D-Bact-132-a-A-18 (L. Ranjard et al., Appl. Environ. Microbiol. 67:4479-4487, 2001), previously proposed for automated ribosomal intergenic spacer analysis (ARISA) of complex bacterial communities. An agricultural soil and a polluted soil, maize silage, goat milk, a small marble sample from the façade of the Certosa of Pavia (Pavia, Italy), and brine from a deep hypersaline anoxi…
Soil microbial biomass carbon and fatty acid composition of earthworm Lumbricus rubellus after exposure to engineered nanoparticles
2014
none 6 no First Online: 14 October 2014 The aim of this work was to investigate the effect of engineered nanoparticles (NPs) on soil microbial biomass C (MBC) and on earthworm Lumbricus rubellus. An artificial soil was incubated for 4 weeks with earthworms fed with vegetable residues contaminated by NPs, consisting of Ag, Co, Ni and TiO2. After the treatments, soils were analysed for MBC and total and water soluble metal-NPs, whereas earthworms were purged for 28 days and then analysed for fatty acids (FAs) and total metal-NPs. Longitudinal sections of earthworms were investigated by environmental scanning electron microscopy (ESEM), equipped with energy-dispersive X-ray spectroscopy (EDS),…
Ocena aktywności przeciwdrobnoustrojowej ekstraktu roślinnego z Dionaea muscipula
2018
Rośliny owadożerne są przedmiotem badań, nie tylko ze względu na charakterystyczny dla nich sposób pobierania składników odżywczych z otoczenia, ale również z powodu ich pożądanego oddziaływania na mikroorganizmy. W piśmiennictwie znajdujemy potwierdzenie, że ekstrakty z roślin owadożernych mają działanie nie tylko bakteriostatyczne, ale również bakteriobójcze i grzybobójcze. Do badań wybrano jednego z przedstawicieli roślin owadożernych, Dionaea muscipula J. Ellis (Muchołówka amerykańska), w celu określenia ich aktywności biologicznej. Materiałem do badań były odpowiednio przygotowanie ekstrakty z dwóch odmian Dionaea muscipula: Regular Form oraz Red Green. Hodowle prowadzono w warunkach ś…
La microbiologie moléculaire environnementale : historique, limites et potentialités
2017
prod 2017-237c INRA EA BIOmE; Résumé de la brochure : Dans une société où il devient urgent de réduire l'empreinte environnementale des activités humaines, la première étape est de pouvoir faire un diagnostic de la qualité de notre environnement et des différentes matrices le constituant (eau, sol, atmosphère, déchets). Les microorganismes, de par leur petite taille, leur énorme diversité taxonomique et génétique, leur réactivité aux perturbations ainsi que par leur forte implication dans les cycles biogéochimiques gérant les flux de matière et d'énergie, sont des candidats incontournables pour élaborer ce diagnostic. Ceci est d'autant plus vrai que depuis une vingtaine d'années les fortes …
Effect of cobalt and silver nanoparticles and ions on Lumbricus rubellus health and on microbial community of earthworm faeces and soil
2016
The aim of this study was to investigate the impact of silver and cobalt, supplied both as ions and nanoparticles (Ag+, Co2+, AgNPs, CoNPs) through contaminated food to earthworms (Lumbricus rubellus), on their health as well as on microbial community of both soil and earthworm faeces. Earthworms and microbes were exposed to the contaminants in laboratory microcosms with artificial soil. Contaminants were supplied once a week for 5 weeks by spiking them on horse manure. The accumulation of CoNPs and Co2+ in earthworm tissues was two and three times greater than AgNPs and Ag+, respectively. Except for AgNPs, contaminants significantly affected microbial community structure of earthworm faece…
Fungi and Bacteria in Indoor Cultural Heritage Environments: Microbial-related Risks for Artworks and Human Health
2016
Cultural heritage constitutive materials can provide excellent substrates for microbial colonization, highly influenced by thermo-hygrometric parameters. In cultural heritage-related environments, a detrimental microbial load may be present both on manufacts surface and in the aerosol. In this study, bacterial and fungal colonisation has been investigated in three Sicilian confined environments (archive, cave and hypogea), each with peculiar structures and different thermo-hygrometric parameters. Particular attention has been paid to microorganisms able to induce artifacts biodeterioration and to release biological particles in the aerosol (spores, cellular debrides, toxins and allergens) p…
Characterization of microbial communities in pest colonized books by molecular biology tools
2011
This work presents the identification of bacteria and fungi colonies in insect infesting books, by cultural-independent methodologies based on molecular biology techniques. Microbial genomic DNA extraction,<em> in vitro</em> amplification of specific target sequences by polymerase chain reactions (PCR), sequencing and sequence analysis were performed. These procedures minimized the samples amount, optimized the diagnostic studies on bacteria and fungi colonization and allowed the identification of many species also in complex microbial consortia. The molecular techniques for sure accomplish and integrate the microbiological standard methods (<em>in vitro</em>&nbs…
The Antiviral Activity of Bacterial, Fungal, and Algal Polysaccharides as Bioactive Ingredients: Potential Uses for Enhancing Immune Systems and Prev…
2021
Viral infections may cause serious human diseases. For instance, the recent appearance of the novel virus, SARS-CoV-2, causing COVID-19, has spread globally and is a serious public health concern. The consumption of healthy, proper, functional, and nutrient-rich foods has an important role in enhancing an individual's immune system and preventing viral infections. Several polysaccharides from natural sources such as algae, bacteria, and fungi have been considered as generally recognized as safe (GRAS) by the US Food and Drug Administration. They are safe, low-toxicity, biodegradable, and have biological activities. In this review, the bioactive polysaccharides derived from various microorga…
Biological control of Listeria monocytogenes in soil model systems by Enterococcus mundtii strains expressing mundticin KS production
2022
Abstract The agricultural practices applied in pre-harvest greatly influence the presence and the levels of microorganisms in fresh produce. Among these, Listeria monocytogenes represents one of the most lethal foodborne pathogens associated with vegetables. The main hypothesis of this work is that bacteriocin producer Enterococcus mundtii strains can be effective against L. monocytogenes in soil. To this purpose, bacteriocin production by E. mundtii WFE3, WFE20 and WFE31, three strains showing a strong bacteriocin activity in terms of inhibitory power and inhibition spectra, was evaluated in sterile extracts from agricultural soil and peat moss, in organic nutrient solution (ONS) and miner…