Search results for "models"

showing 10 items of 8211 documents

Realistic genetic architecture enables organismal adaptation as predicted under the folk definition of inclusive fitness

2021

A fundamental task of evolutionary biology is to explain the pervasive impression of organismal design in nature, including traits benefiting kin. Inclusive fitness is considered by many to be a crucial piece in this puzzle, despite ongoing discussion about its scope and limitations. Here, we use individual-based simulations to study what quantity (if any) individual organisms become adapted to maximize when genetic architectures are more or less suitable for the presumed main driver of biological adaptation, namely cumulative multi-locus evolution. As an expository device, we focus on a hypothetical situation called Charlesworth's paradox, in which altruism is seemingly predicted to evolve…

0106 biological sciences0301 basic medicineCognitive scienceNatural selectionModels GeneticScope (project management)media_common.quotation_subjectInclusive fitnessBiologyAltruismBiological Evolution010603 evolutionary biology01 natural sciencesAltruismGenetic architectureTask (project management)03 medical and health sciencesPhenotype030104 developmental biologyGenetic FitnessSelection GeneticAdaptationEcology Evolution Behavior and SystematicsSelection (genetic algorithm)media_commonJournal of Evolutionary Biology
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Sex-allocation conflict and sexual selection throughout the lifespan of eusocial colonies.

2018

AbstractModels of sex allocation conflict are central to evolutionary biology but have mostly assumed static decisions, where resource allocation strategies are constant over colony lifespan. Here, we develop a model to study how the evolution of dynamic resource allocation strategies is affected by the queen-worker conflict in annual eusocial insects. We demonstrate that the time of dispersal of sexuals affects the sex allocation ratio through sexual selection on males. Furthermore, our model provides three predictions that depart from established results of classic static allocation models. First, we find that the queen wins the sex allocation conflict, while the workers determine the max…

0106 biological sciences0301 basic medicineConflictconflictmedia_common.quotation_subjectLongevitylife-history strategyresursointiBiology010603 evolutionary biology01 natural sciencesModels BiologicalLife history theory03 medical and health sciencesGeneticsAnimalsEcology Evolution Behavior and SystematicsSex allocationmedia_commonsex allocationsocial insectsoptimal resource allocationLongevityOriginal ArticlesMating Preference AnimalSex Determination ProcessesyhteiskuntahyönteisetEusocialityHymenoptera030104 developmental biologyAnimals; Hymenoptera/growth & development; Hymenoptera/physiology; Longevity; Mating Preference Animal; Models Biological; Sex Determination Processes; Conflict; life-history strategy; optimal resource allocation; sex allocation; social insectssukupuolivalintaSexual selectionResource allocationBiological dispersalDemographic economicsOriginal Articlelife‐history strategyGeneral Agricultural and Biological SciencesaitososiaalisuusDynamic resourceEvolution; international journal of organic evolution
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Morphological and genetic analyses reveal a cryptic species complex in the echinoid Echinocardium cordatum and rule out a stabilizing selection expla…

2014

14 pages; International audience; Preliminary analyses revealed the presence of at least five mitochondrial clades within the widespread sea urchin Echinocardium cordatum (Spatangoida). In this study, we analyzed the genetic (two mitochondrial and two nuclear sequence loci) and morphological characteristics (20 indices) from worldwide samples of this taxon to establish the species limits, morphological diversity and differentiation. Co-occurring spatangoid species were also analyzed with mitochondrial DNA. The nuclear sequences confirm that mitochondrial lineages correspond to true genetic entities and reveal that two clades (named A and B1) hybridize in their sympatry area, although a more…

0106 biological sciences0301 basic medicineEchinocardium cordatumMorphologyMitochondrial DNASpecies complexZoologyBiology[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyDNA Mitochondrial010603 evolutionary biology01 natural sciences03 medical and health sciencesEffective population sizeGenetic variationGeneticsAnimals14. Life underwaterSelection GeneticStabilizing selectionCladeMolecular BiologyEcology Evolution Behavior and SystematicsCell NucleusModels Genetic[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Genetic Variationbiology.organism_classificationMitochondriaMitochondrialEurope030104 developmental biologyTaxonCryptic-species[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Sea UrchinsEPIC[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy
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Not all sex ratios are equal : the Fisher condition, parental care and sexual selection

2017

The term ‘sex roles’ encapsulates male–female differences in mate searching, competitive traits that increase mating/fertilization opportunities, choosiness about mates and parental care. Theoretical models suggest that biased sex ratios drive the evolution of sex roles. To model sex role evolution, it is essential to note that in most sexually reproducing species (haplodiploid insects are an exception), each offspring has one father and one mother. Consequently, the total number of offspring produced by each sex is identical, so the mean number of offspring produced by individuals of each sex depends on the sex ratio (Fisher condition). Similarly, the total number of heterosexual matings …

0106 biological sciences0301 basic medicineEvolution of sexual reproductionOffspringparental careBiologyModels Biological010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesAnimalsHumanssexual selectionSex RatioMatingMaternal Behavior10. No inequalityPaternal BehaviorSex allocationGender Identitysex ratiosArticlesMating Preference AnimalFisher condition030104 developmental biologyMate choicesukupuolivalintaSexual selectionta1181General Agricultural and Biological SciencesPaternal careSex ratioDemographyPhilosophical Transactions of the Royal Society B: Biological Sciences
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Chaenothecopsis schefflerae (Ascomycota: Mycocaliciales): a widespread fungus on semi-hardened exudates of endemic New Zealand Araliaceae

2017

Ascomycetes specialised to live on hardened plant exudates occur worldwide, but the number of species so far described is relatively small (c.30). Particularly within the genus Chaenothecopsis (Ascomycota:Mycocaliciales), many species produce their ascomata on hardened but still relatively fresh outpourings of conifer resin or angiosperm exudate. Temperate rainforests of New Zealand provide habitat for several endemic Chaenothecopsis species, including Chaenothecopsis schefflerae, which was previously known from a single sample collected from the exudate of Schefflera digitata (Araliaceae) in the early 1980s. Here we show that C.schefflerae is neither lost nor very rare, but occurs sporadic…

0106 biological sciences0301 basic medicineExudateRIBOSOMAL DNA-SEQUENCESPHYLOGENYkotelosienetMODELSUusi-SeelantiPlant SciencePseudopanax010603 evolutionary biology01 natural sciences03 medical and health sciencesresinicolous fungiNOV.GenusBotanymedicine1183 Plant biology microbiology virologyEcology Evolution Behavior and SystematicsIDENTIFICATIONbiologyMycocaliciumHUMBOLDTENSISexudate15. Life on land030108 mycology & parasitologybiology.organism_classificationPseudopanaxScheffleraScheffleraNEW-CALEDONIAAscocarp1181 Ecology evolutionary biologySchefflera digitatata1181AraliaceaeType specimenmedicine.symptomNew ZealandNew Zealand Journal of Botany
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GIPC: Glycosyl Inositol Phospho Ceramides, the major sphingolipids on earth

2016

What are the most abundant sphingolipids on earth? The answer is Glycosyl Inositol Phosphoryl Ceramides (GIPCs) present in fungi and the green lineage. In this review, we discuss the putative role of plant GIPCs in the lipid bilayer asymmetry, in the lateral organization of membrane rafts and in the very long chain fatty acid inter-leaflet coupling of lipids in the plant plasma membrane (PM). A special focus on the structural similarities -and putative functions- of GIPCs is discussed by comparison with animal gangliosides, structural homologs of plant GIPCs.

0106 biological sciences0301 basic medicineGlycosylationGlycosylationVery long chain fatty acidPlant ScienceBiologyCeramidesModels Biological01 natural sciencesCell wall03 medical and health scienceschemistry.chemical_compoundMembrane MicrodomainsPlant defense against herbivoryAnimalsGlycosylInositolLipid bilayerSphingolipidsMini-ReviewPlantsSphingolipid030104 developmental biologychemistryBiochemistrylipids (amino acids peptides and proteins)010606 plant biology & botanyPlant Signaling & Behavior
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A hierarchical Bayesian Beta regression approach to study the effects of geographical genetic structure and spatial autocorrelation on species distri…

2019

Global climate change (GCC) may be causing distribution range shifts in many organisms worldwide. Multiple efforts are currently focused on the development of models to better predict distribution range shifts due to GCC. We addressed this issue by including intraspecific genetic structure and spatial autocorrelation (SAC) of data in distribution range models. Both factors reflect the joint effect of ecoevolutionary processes on the geographical heterogeneity of populations. We used a collection of 301 georeferenced accessions of the annual plant Arabidopsis thaliana in its Iberian Peninsula range, where the species shows strong geographical genetic structure. We developed spatial and nonsp…

0106 biological sciences0301 basic medicineHierarchical Bayesian modelsArabidopsis thalianaRange (biology)Bayesian probabilitySpecies distributionArabidopsisGenetic admixtureBiologyResidual010603 evolutionary biology01 natural sciences03 medical and health sciencesAfrica NorthernStatisticsGeneticsSpatial analysisEcology Evolution Behavior and SystematicsSpatial AnalysisPortugalPlant DispersalGenetic heterogeneityGlobal climate changePhylogeographyGenetics Population030104 developmental biologySpainGenetic structureGeographic genetic structureMaxentPeptidesSpatial autocorrelationBiotechnology
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Daphnia invest in sexual reproduction when its relative costs are reduced

2018

The timing of sex in facultatively sexual organisms is critical to fitness, due to the differing demographic consequences of sexual versus asexual reproduction. In addition to the costs of sex itself, an association of sex with the production of dormant life stages also influences the optimal use of sex, especially in environments where resting eggs are essential to survive unfavourable conditions. Here we document population dynamics and the occurrence of sexual reproduction in natural populations of Daphnia magna across their growing season. The frequency of sexually reproducing females and males increased with population density and with decreasing asexual clutch sizes. The frequency of…

0106 biological sciences0301 basic medicineLIFE-HISTORYsexual reproductioncost of sexAsexual reproductionCYCLICAL PARTHENOGENS01 natural sciencesDaphniaPopulation density2300 General Environmental Sciencetiming of sexLOCAL ADAPTATION2400 General Immunology and Microbiologypopulation dynamicsGeneral Environmental Scienceeducation.field_of_studybiologyINDUCTIONMIXED-EFFECTS MODELSGeneral MedicineCladocera1181 Ecology evolutionary biology590 Animals (Zoology)General Agricultural and Biological SciencesEvolutionPopulationDaphnia magna1100 General Agricultural and Biological SciencesPULEX010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciences10127 Institute of Evolutionary Biology and Environmental Studies1300 General Biochemistry Genetics and Molecular BiologyPopulation growtheducationpopulation densityLocal adaptationROTIFERSGeneral Immunology and Microbiologysuvullinen lisääntyminenreproduction (biology)biology.organism_classificationlisääntyminenpopulaatiodynamiikkaSexual reproduction030104 developmental biologyDaphniaMAGNADENSITYvesikirputta1181570 Life sciences; biologyDemography
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Open data and digital morphology

2017

International audience; Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases…

0106 biological sciences0301 basic medicineLife Sciences & Biomedicine - Other TopicsDYNAMICSComputer scienceDatasets as TopicReuse01 natural sciencesFOSSILSthree-dimensional modelsNaturvetenskapData CurationGeneral Environmental ScienceEcologypalaeontology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]70General Medicine11 Medical And Health SciencesCCbiomechanics Keywords: digital dataOpen dataPerspectiveComputer data storage[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeneral Agricultural and Biological SciencesNatural SciencesLife Sciences & BiomedicineDatasets as Topic1001TISSUESphenotypeBest practiceDigital dataLibrary science25Environmental Sciences & Ecology010603 evolutionary biologyBiological Science DisciplinesGeneral Biochemistry Genetics and Molecular BiologyQA76functional analysisSet (abstract data type)03 medical and health sciencesPALEONTOLOGYBiologySubject Category: Morphology and biomechanics Subject Areas: evolutionvisualizationdigital dataEvolutionary BiologyScience & TechnologyTOMOGRAPHIC MICROSCOPYMorphology and BiomechanicsGeneral Immunology and Microbiologybusiness.industryResearchQHReproducibility of Resultscomputed tomographyPERFORMANCE06 Biological Sciences144Data scienceEVOLUTIONVisualization030104 developmental biologyVISUALIZATION07 Agricultural And Veterinary SciencesbusinessProceedings of the Royal Society B: Biological Sciences
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Ageing via perception costs of reproduction magnifies sexual selection.

2018

Understanding what factors modulate sexual selection intensity is crucial to a wide variety of evolutionary processes. Recent studies show that perception of sex pheromones can severely impact male mortality when it is not followed by mating (perception costs of reproduction). Here, we examine the idea that this may magnify sexual selection by further decreasing the fitness of males with inherently low mating success, hence increasing the opportunity for sexual selection. We use mathematical modelling to show that even modest mortality perception costs can significantly increase variability in male reproductive success under a wide range of demographic conditions. We then conduct a series …

0106 biological sciences0301 basic medicineMaleAgingEvolutionmedia_common.quotation_subjectReproductive ageingBiology010603 evolutionary biology01 natural sciencesModels BiologicalGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesPerceptionAnimalsMatingGeneral Environmental Sciencemedia_commonGeneral Immunology and MicrobiologyReproductive successReproductionGeneral MedicineMating Preference AnimalBiological Evolution030104 developmental biologyDrosophila melanogasterFertilityAgeingSexual selectionSex pheromoneFemaleReproductionGeneral Agricultural and Biological SciencesDemographyProceedings. Biological sciences
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