Search results for "mutation."

showing 10 items of 2808 documents

Specific Defects in Different Transcription Complexes Compensate for the Requirement of the Negative Cofactor 2 Repressor in Saccharomyces cerevisiae

2007

Abstract Negative cofactor 2 (NC2) has been described as an essential and evolutionarily conserved transcriptional repressor, although in vitro and in vivo experiments suggest that it can function as both a positive and a negative effector of transcription. NC2 operates by interacting with the core promoter and components of the basal transcription machinery, like the TATA-binding protein (TBP). In this work, we have isolated mutants that suppress the growth defect caused by the depletion of NC2. We have identified mutations affecting components of three different complexes involved in the control of basal transcription: the mediator, TFIIH, and RNA pol II itself. Mutations in RNA pol II in…

Saccharomyces cerevisiae ProteinsTranscription GeneticRepressorRNA polymerase IISaccharomyces cerevisiaeInvestigationsGeneticsPromoter Regions GeneticTranscription factorAllelesGeneticsAdenosine TriphosphatasesTATA-Binding Protein Associated FactorsbiologyGeneral transcription factorDNA HelicasesPromoterPhosphoproteinsRepressor ProteinsProtein SubunitsTranscription Factor TFIIHMutationTranscription factor II Hbiology.proteinTrans-ActivatorsTranscription Factor TFIIBMutant ProteinsTranscription Factor TFIIDRNA Polymerase IITranscription factor II BTranscription Factor TFIIHTranscription Factors
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The distribution of active RNA polymerase II along the transcribed region is gene-specific and controlled by elongation factors.

2010

In order to study the intragenic profiles of active transcription, we determined the relative levels of active RNA polymerase II present at the 3'- and 5'-ends of 261 yeast genes by run-on. The results obtained indicate that the 3'/5' run-on ratio varies among the genes studied by over 12 log(2) units. This ratio seems to be an intrinsic characteristic of each transcriptional unit and does not significantly correlate with gene length, G + C content or level of expression. The correlation between the 3'/5' RNA polymerase II ratios measured by run-on and those obtained by chromatin immunoprecipitation is poor, although the genes encoding ribosomal proteins present exceptionally low ratios in …

Saccharomyces cerevisiae ProteinsbiologyGeneral transcription factorTranscription GeneticGenes FungalRNA-dependent RNA polymeraseRNA polymerase IISaccharomyces cerevisiaeGene Regulation Chromatin and EpigeneticsMolecular biologyTranscripció genèticaMutationGeneticsRNA polymerase Ibiology.proteinRNATranscription factor II FRNA Polymerase IITranscription factor II DTranscriptional Elongation FactorsTranscription factor II BRNA polymerase II holoenzymeOligonucleotide Array Sequence AnalysisNucleic acids research
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Acid excreting mutants of yeast Saccharomyces cerevisiae.

2004

Saccharomyces cerevisiae mutants acidifying glucose medium containing bromocresol purple were shown to excrete protons when placed in unbuffered water in the absence of any external carbon source. The mutants belong to 16 different complementation groups. Most of them do not grow on glycerol and the excreted protons are associated to particular sets of organic anions such as citrate, aconitate, succinate, fumarate or malate. These novel types of respiratory mutations seem to be located in genes operating in the Krebs or glyoxylate cycle.

Saccharomyces cerevisiaeMutantCitric Acid CycleBiophysicsGlyoxylate cycleSaccharomyces cerevisiaeBiologyBiochemistrychemistry.chemical_compoundMolecular BiologyWaterCell BiologyHydrogen-Ion Concentrationbiology.organism_classificationYeastComplementationCitric acid cyclechemistryBiochemistryMutationbiology.proteinProtonsBromocresol purpleAcidsOxidation-ReductionOrganic anionBiochemical and biophysical research communications
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Diagonalization of indefinite saddle point forms

2020

We obtain sufficient conditions that ensure block diagonalization (by a direct rotation) of sign-indefinite symmetric sesquilinear forms as well as the associated operators that are semi-bounded neither from below nor from above. In the semi-bounded case, we refine the obtained results and, as an example, revisit the block Stokes operator from fluid dynamics.

Saddle pointMathematical analysisFluid dynamicsBlock (permutation group theory)Perturbation theory (quantum mechanics)Stokes operatorRotation (mathematics)Mathematics
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Prevention of benzo(a)pyrene-induced mutagenicity by homogeneous epoxide hydratase

1976

Benzo(a)pyrene and benz(a)anthrancene which, in contrast to the K-region epoxides benzo(a)pyrene 4,5-oxide and benz(a)anthracene 5,6-oxide, are not mutagenic to Salmonella typhimurium TA 1537 in the absence of mammalian enzyme preparations, were activated by liver microsomes from C3H mice, which had not received any pretreatment, to mutagens reverting this tester strain to histidine prototrophy. Addition of epoxide hydratase inhibitors greatly increased this mutagenicity and addition of pure epoxide hydratase reduced it by more than 95% down to the range of spontaneous mutations as observed in absence of any added mutagen. This demonstrates that the metabolic pathway responsible for the mut…

Salmonella typhimuriumCancer ResearchMutagenmedicine.disease_causechemistry.chemical_compoundEpoxide HydrataseBenz(a)AnthracenesmedicineBenzopyrenesHydro-LyasesHistidineEpoxide Hydrolaseschemistry.chemical_classificationChemistryfungifood and beveragesMolecular biologyEnzymeOncologyBiochemistryBenzo(a)pyreneHomogeneousMutationMicrosomes LiverMicrosomePyreneNADPInternational Journal of Cancer
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Some substrates and inhibitors of cytosolic epoxide hydrolase induce sister-chromatid exchanges in mammalian cells, but do not induce gene mutations …

1993

Abstract Trans -stilbene oxide, trans -β-methylstyrene, 7,8-oxide, trans -β-ethylstyrene, 7,8-oxide, trans -β-propylstyrene 7,8-oxide and 4-fluorochalcone oxide were investigated for genotoxic activity in bacterial and mammalian cells, in the absence of external xenobiotic-metabolising systems. All compounds strongly enhanced the frequency of sister-chromatid exchanges (SCE) in cultured human lymphocytes. None of them was mutagenic in Salmonella typhimurium (reversion of the his − strains TA98, TA100 and TA104). The limit of detection was 1 20,000 to 1 10 6 of the activity of the positive control, benzo[ a ]pyrene 4,5-oxide, depending on the compound and the bacterial strain. Trans -β-methy…

Salmonella typhimuriumHealth Toxicology and MutagenesisHamsterSister chromatid exchangeGene mutationChinese hamsterAmes testStyreneschemistry.chemical_compoundChalconeChalconesCricetulusStyrene oxideCricetinaeStilbenesGeneticsAnimalsHumansLymphocytesEpoxide hydrolaseMolecular Biologychemistry.chemical_classificationEpoxide HydrolasesbiologyMutagenicity Testsbiology.organism_classificationEnzymeBiochemistrychemistryEpoxy CompoundsSister Chromatid ExchangeCell DivisionMutagensMutation research
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Squaraine Dyes for Photodynamic Therapy: Study of Their Cytotoxicity and Genotoxicity in Bacteria and Mammalian Cells¶‡

2007

Halogenated squaraine dyes are characterized by long wavelength absorption (>600 nm) and high triplet yields and therefore represent new types of photosensitizers that could be useful for photodynamic therapy. We have analyzed the cytotoxicity and genotoxicity of the bromo derivative 1, the iodo derivative 2 and the corresponding nonhalogenated dye 3 in the absence and presence of visible light. At concentrations of 1-2 microM, 1 and 2 reduced the cloning efficiency of AS52 Chinese hamster ovary cells to less than 1% under conditions that were well tolerated in the dark. Similarly, the proliferation of L5178Y mouse lymphoma cells was inhibited by photoexcited 1 and 2 with high selectivity. …

Salmonella typhimuriumLightmedicine.medical_treatmentPhotodynamic therapyCHO CellsPhotochemistrymedicine.disease_causeBiochemistryMicePhenolsCricetinaemedicineTumor Cells CulturedAnimalsPhysical and Theoretical ChemistryCytotoxicityMicronucleus TestsPhotosensitizing AgentsbiologyDose-Response Relationship DrugMolecular StructureChemistryCytotoxinsMutagenicity TestsChinese hamster ovary cellGeneral Medicinebiology.organism_classificationIn vitroPhotochemotherapyMicronucleus testMutationBiophysicsBacteriaGenotoxicityCyclobutanesVisible spectrumMutagensPhotochemistry and Photobiology
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Genotoxicity of six pesticides by Salmonella mutagenicity test and SOS chromotest.

1997

Abstract Two in vitro tests (Ames test and SOS chromotest), one for bacterial mutagenicity and one for primary DNA damage, were assayed to determine the genotoxic activity of 6 pesticides (atrazine, captafol, captan, chlorpyrifosmethyl, molinate and tetrachlorvinphos). Assays were carried out both in the absence and presence of S9 fractions of liver homogenate from rat (Sprague–Dawley) pretreated with Aroclor 1254. Captan and captafol were genotoxic on both the Ames test and the SOS chromotest. Comparisons with mutagenesis data in Salmonella indicated that the SOS assay detected as genotoxic the pesticides that were mutagenic on the Salmonella test. Non-genotoxic effects were not detected i…

Salmonella typhimuriumSalmonellaInsecticidesHealth Toxicology and MutagenesisBiologyGene mutationmedicine.disease_causeAmes testMicrobiologyTetrachlorvinphosRats Sprague-Dawleychemistry.chemical_compoundGeneticsmedicineEscherichia coliAnimalsAtrazineSOS Response GeneticsCaptanDose-Response Relationship DrugHerbicidesMutagenicity Testsfood and beveragesFungicides IndustrialRatsSOS chromotestchemistryLiverMicrosomes LiverGenotoxicityDNA DamageMutation research
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Metabolites of diethylstilboestrol induce sister chromatid exchange in human cultured fibroblasts

1979

Diethylstilboesterol (DES) is one of the few substances for which a clear association with carcinogenicity has been established in man. Nevertheless, it is still widely used, mainly as a cheap oestrogen to increase the slaughter weight of beef, but in spite of this it is not known if residues in the meat or metabolites excreted by the cattle are hazardous to man. It is also unknown whether there is a threshold dose below which DES is harmless. A threshold might be expected if a hormonal mechanism of carcinogensis rather than metabolic activation to an electrophically reactive species operats. This possibility was supported by the observations that DES, in contrast to most other carcinogens,…

Salmonella typhimuriumSalmonellaMultidisciplinaryChemistrySister chromatid exchangeStimulationNaphtholsmedicine.disease_causeSlaughter weightStimulation ChemicalMixed Function OxygenasesThreshold doseBiochemistryMutationmedicineMicrosomeHumansCrossing Over GeneticDiethylstilbestrolSister Chromatid ExchangeCells CulturedCarcinogenHormoneNature
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Dual role of epoxide hydratase in both activation and inactivation of benzo(a)pyrene.

1977

The effect of epoxide hydratase upon the mutagenicity of benzo(a)pyrene was investigated using two Salmonella typhimurium strains (TA 1537 and TA 98). These two bacterial strains were found to differ characteristically in their susceptibility to different mutagens biologically produced from benzo(a)pyrene providing a diagnostic tool to investigate which types of mutagenic metabolites were produced in various metabolic situations. The results showed that the pattern of mutagenic metabolites produced by microsomes from methylcholanthrene-treated mice was very different from that produced by microsomes from phenobarbital-treated or untreated mice. However in all cases at least two mutagenic me…

Salmonella typhimuriumendocrine systemHealth Toxicology and MutagenesisPharmacology toxicologyToxicologychemistry.chemical_compoundMiceDual roleEpoxide HydrataseAnimalsBenzopyrenesVolume concentrationBiotransformationEpoxide Hydrolasesfood and beveragesGeneral MedicineMonooxygenasechemistryBiochemistryBenzo(a)pyrenePhenobarbitalMutationMicrosomeMicrosomes LiverPyreneMethylcholanthreneMutagensArchives of toxicology
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