Search results for "oligo"

showing 10 items of 1298 documents

Involvement of nitrate reductase and pyoverdine in competitiveness of Pseudomonas fluorescens strain C7R12 in soil

2001

ABSTRACT Involvement of nitrate reductase and pyoverdine in the competitiveness of the biocontrol strain Pseudomonas fluorescens C7R12 was determined, under gnotobiotic conditions, in two soil compartments (bulk and rhizosphere soil), with the soil being kept at two different values of matric potential (−1 and −10 kPa). Three mutants affected in the synthesis of either the nitrate reductase (Nar − ), the pyoverdine (Pvd − ), or both (Nar − Pvd − ) were used. The Nar − and Nar − Pvd − mutants were obtained by site-directed mutagenesis of the wild-type strain and of the Pvd − mutant, respectively. The selective advantage given by nitrate reductase and pyoverdine to the wild-type strain was as…

SiderophorePseudomonas fluorescensNitrate reductasePseudomonas fluorescensApplied Microbiology and BiotechnologyNitrate ReductasePlant Roots03 medical and health scienceschemistry.chemical_compoundPlant MicrobiologySolanum lycopersicumNitrate ReductasesSelection GeneticSoil MicrobiologyComputingMilieux_MISCELLANEOUS030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesRhizospherePyoverdineEcologybiology030306 microbiologyPigments Biologicalbiology.organism_classification[SDV.EE] Life Sciences [q-bio]/Ecology environmentBiochemistrychemistryPseudomonadalesCommunicable Disease ControlMutationSoil microbiologyOligopeptidesFood ScienceBiotechnologyPseudomonadaceae
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Apical transport of osteopontin is independent of N-glycosylation and sialylation.

2002

Studies of how epithelial surface polarity into apical and basolateral domains is generated and maintained have proposed that carbohydrate modifications serve as apical targeting signals for proteins by interacting with lectin sorters. However, the experimental evidence in support of N-glycans, O-glycans and sialic acids mediating apical transport is still very controversial. This could be partly due to the fact that in most studies exogenously expressed proteins were analysed. One has, therefore, examined the role of carbohydrate moieties in apical targeting of the endogenous secretory protein osteopontin in MDCK cells. It was found, however, that sorting of osteopontin does not require N-…

Signal peptideAcetylgalactosamineGlycosylationProtein ConformationSialoglycoproteinsOligosaccharidesBiologyProtein Sorting SignalsKidneyCell Linechemistry.chemical_compoundDogsN-linked glycosylationLectinsCell polarityBenzyl CompoundsAnimalsOsteopontinMolecular BiologyCell PolarityEpithelial CellsCell BiologySialic acidTransport proteincarbohydrates (lipids)Molecular WeightProtein TransportProtein Sorting SignalsSecretory proteinchemistryBiochemistrybiology.proteinSialic AcidsOsteopontinMolecular membrane biology
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Effects of silver sulfide nanoparticles on the earthworm Eisenia andrei

2022

The massive production and use of silver nanoparticles (Ag NPs) have led to their increasing release into the environment. Even though the antimicrobial and cytotoxic effects of native nanoparticles have been well studied, the environmental impacts of transformation products such as silver sulfide nanoparticles (Ag

SilverPhysiologyHealth Toxicology and MutagenesisMetal NanoparticlesSilver CompoundsQ Science (General)Cell BiologyGeneral MedicineToxicologyBiochemistrySoilWeight LossAnimalsSilver NitrateSoil PollutantsOligochaeta
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Differentiating Multiple Sclerosis From AQP4-Neuromyelitis Optica Spectrum Disorder and MOG-Antibody Disease With Imaging.

2023

Background and ObjectivesRelapsing-remitting multiple sclerosis (RRMS), aquaporin-4 antibody–positive neuromyelitis optica spectrum disorder (AQP4-NMOSD), and myelin oligodendrocyte glycoprotein antibody–associated disease (MOGAD) may have overlapping clinical features. There is an unmet need for imaging markers that differentiate between them when serologic testing is unavailable or ambiguous. We assessed whether imaging characteristics typical of MS discriminate RRMS from AQP4-NMOSD and MOGAD, alone and in combination.MethodsAdult, nonacute patients with RRMS, APQ4-NMOSD, and MOGAD and healthy controls were prospectively recruited at the National Hospital for Neurology and Neurosurgery (L…

Sistema nerviós central - MalaltiesMalalties autoimmunitàries:aminoácidos péptidos y proteínas::proteínas::glicoproteínas::glicoproteínas de membranas::butirofilinas::glicoproteína mielínica del oligodendrocito [COMPUESTOS QUÍMICOS Y DROGAS]:Nervous System Diseases::Autoimmune Diseases of the Nervous System::Demyelinating Autoimmune Diseases CNS::Myelitis Transverse::Neuromyelitis Optica [DISEASES]:enfermedades del sistema nervioso::enfermedades autoinmunitarias del sistema nervioso::enfermedades autoinmunes desmielinizantes del SNC::mielitis transversa::neuromielitis óptica [ENFERMEDADES]:Nervous System Diseases::Autoimmune Diseases of the Nervous System::Demyelinating Autoimmune Diseases CNS::Multiple Sclerosis [DISEASES]Esclerosi múltiple:Amino Acids Peptides and Proteins::Proteins::Glycoproteins::Membrane Glycoproteins::Butyrophilins::Myelin-Oligodendrocyte Glycoprotein [CHEMICALS AND DRUGS]:Diagnosis::Diagnostic Techniques and Procedures::Diagnostic Imaging::Tomography::Magnetic Resonance Imaging [ANALYTICAL DIAGNOSTIC AND THERAPEUTIC TECHNIQUES AND EQUIPMENT]:enfermedades del sistema nervioso::enfermedades autoinmunitarias del sistema nervioso::enfermedades autoinmunes desmielinizantes del SNC::esclerosis múltiple [ENFERMEDADES]Imatgeria per ressonància magnèticaNA:diagnóstico::técnicas y procedimientos diagnósticos::diagnóstico por imagen::tomografía::imagen por resonancia magnética [TÉCNICAS Y EQUIPOS ANALÍTICOS DIAGNÓSTICOS Y TERAPÉUTICOS]Neurology (clinical)Neurology
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Against cyber-utopianism. Utopian discourse "versus" sociological analysis of the transition to the digital paradigm of the cultural sphere

2015

La cultura ha dejado de ser la esfera social que iluminaba la modernidad. A pesar de su mayor centralidad social y económica propia de la sociedad postfordista, las transformaciones económicas y tecnológicas de los últimos años están cuestionando su propia existencia como esfera autónoma. En este contexto, el discurso ciberutopismo hace una lectura totalmente positiva de estas transformaciones como un empoderamiento del consumidor o del surgimientos de nuevas cadenas de cooperación creativa. Frente a este discurso ideológicamente cargado, es necesaria una ruptura epistemológica y una construcción de un programa de investigación desde la sociología de las artes y la cultura, que evalúe de fo…

Sociology and Political Scienceesfera culturalciberutopismomedia_common.quotation_subjectciberfetichismoContext (language use)CommunityCyber-utopianismCyber-fetishismOligopolizationEpistemological rupturecomunidadconsumo culturalSociologySocial scienceEmpowermentoligopolización.Cultural Consumptionmedia_commonparadigma digitalSociology of cultureTechnological changeWelfare economicsModernityCultural SphereDigital ParadigmIdeologyCentralityPolítica y Sociedad
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A statistical design of experiments for optimizing the MALDI-TOF-MS sample preparation of polymers. An application in the assessment of the thermo-me…

2011

[EN] The sample preparation procedure for MALDI-TOF MS of polymers is addressed in this study by the application of a statistical Design of Experiments (DoE). Industrial poly (ethylene terephthalate) (PET) was chosen as model polymer. Different experimental settings (levels) for matrixes, analyte/matrix proportions and concentrations of cationization agent were considered. The quality parameters used for the analysis were signal-to-noise ratio and resolution. A closer inspection of the statistical results provided the study not only with the best combination of factors for the MALDI sample preparation, but also with a better understanding of the influence of the different factors, individua…

Solucions polimèriquesEthylenePolymersAnalytical chemistryDegradation kineticsBiochemistryThermo-mechanical degradationSample preparation procedureAnalytical ChemistryMatrix (chemical analysis)chemistry.chemical_compoundDegradationGlycolsMatrix assisted laser desorption ionization time of flight mass spectrometryPolyethylene terephthalateMechanismsCationizationSample preparationRecyclingMechanical recyclingSpectroscopyPriority journalchemistry.chemical_classificationDithranolSignal to noise ratioPolyethylene terephthalateHydrolysisMultiple processingPolymerPoly (ethylene terephthalate)Potential reactionsInjection cyclesMAQUINAS Y MOTORES TERMICOSInductively coupled plasmaSimulationEthersMatrix-assisted laser desorption/ionization time-of-flightQuality parametersDesign of ExperimentsGlycol unitsSample preparationArticleEthyleneEnvironmental ChemistryPolyethylene terephthalatesMALDI TOF MSSignal noise ratioMass spectrometryMatrixTermoplàsticsSignal to noiseTransesterificationDegradation mechanismMatrix-assisted laser desorption/ionizationStatistical design of experimentsTransesterificationchemistryChemical engineeringOligomersDesorptionEthylene glycolControlled studyProcess optimizationAnalytica chimica acta
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Assessing the MALDI-TOF MS sample preparation procedure to analyze the influence of thermo-oxidative ageing and thermo-mechanical degradation on poly…

2011

[EN] Multiple processing by means of successive injection cycles was used to simulate the thermo-mechanical degradation effects on the oligomeric distribution of PLA under mechanical recycling. Likewise, an accelerated thermal ageing over PLA glass transition was performed in order to simulate its service life. MALDI-TOF MS was used for the analysis and the sample preparation procedure was assessed by means of a statistical Design of Experiments (DoE). The quality effects in use for the analysis were signal-to-noise ratio and Resolution. Different matrixes, analyte/matrix proportions and the use of NaTFA as cationization agent were considered. A deep inspection of the statistical results pr…

Solucions polimèriquesPolymers and PlasticsGeneral Physics and AstronomyTransesterificationsThermo-mechanical degradationSample preparation procedureMatrix (chemical analysis)DegradationMechanismsMaterials ChemistryCationizationMechanical recyclingSample preparationRepeating unitPoly(lactide)Signal to noise ratioChemistryMultiple processingDesign of Experiments (DoE)AnalytesInjection cyclesPolylactidesMAQUINAS Y MOTORES TERMICOSMatrix-assisted laser desorption/ionization-time-of-flight mass spectrometryGlass transitionDesign of experimentsGlass lasersThermo mechanicalMALDI TOF MSChromatographyMatrixMass spectrometrySignal to noiseTermoplàsticsOrganic ChemistryDegradation mechanismThermo-oxidative ageingStatistical design of experimentsMatrix-assisted laser desorption/ionizationInvestigation methodsMatrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS)Polylactide (PLA)AgeingOligomersDegradation (geology)DesorptionDeep inspectionExperimentsPoly(lactide)European Polymer Journal
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A systems biology perspective on cholangiocellular carcinoma development: focus on MAPK-signaling and the extracellular environment.

2008

Background/Aims Multiple genes have been implicated in cholangiocellular carcinoma (CCC) development. However, the overall neoplastic risk is likely associated with a much lower number of critical physiological pathways. Methods To investigate this hypothesis, we extracted all published genetic associations for the development of CCC from PubMed (genetic association studies, but also studies associating genes and CCC in general, i.e. functional studies in cell lines, genetic studies in humans, knockout mice etc.) and integrated CCC microarray data. Results We demonstrated the MAPK pathway was consistently enriched in CCC. Comparing our data to genetic associations in HCC often successfully …

SorafenibMAPK/ERK pathwayNiacinamideMAP Kinase Signaling SystemPyridinesSystems biologyAntineoplastic AgentsOncogenomicsBiologyCholangiocarcinomaMiceDatabases GeneticmedicineAnimalsHumansGeneOligonucleotide Array Sequence AnalysisHepatologyMicroarray analysis techniquesKinasePhenylurea CompoundsSystems BiologyBenzenesulfonatesComputational BiologySorafenibBiological EvolutionBile Ducts IntrahepaticBile Duct NeoplasmsMultigene FamilyImmunologyKnockout mouseCancer researchExtracellular Spacemedicine.drugJournal of hepatology
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Chemoenzymatic Synthesis of Functional Sialyl LewisX Mimetics with a Heteroaromatic Core

2014

Functional mimetics of the sialyl Lewis(X) tetrasaccharide were prepared by the enzymatic sialylation of a 1,3-diglycosylated indole and a glycosyl azide, which was subsequently transformed into a 1,4-diglycosylated 1,2,3-triazole, by using the trans-sialidase of Trypanosoma cruzi. These compounds inhibited the binding of E-, L-, and P-selectin-coated nanoparticles to polyacrylamide-bound sialyl-Lewis(X) -containing neighboring sulfated tyrosine residues (sTyr/sLe(X) -PAA) at low or sub-millimolar concentrations. Except for E-selectin, the mimetics showed higher activities than the natural tetrasaccharide.

Spectrometry Mass Electrospray IonizationStereochemistryProton Magnetic Resonance SpectroscopyTrypanosoma cruziMolecular Sequence DataNeuraminidaseOligosaccharidessaccharide mimeticsBiochemistryenzyme catalysisEnzyme catalysischemistry.chemical_compoundSulfationTetrasaccharideAnimalsGlycosylTyrosineCarbon-13 Magnetic Resonance SpectroscopySialyl Lewis X AntigenGlycoproteinsIndole testheterocyclesOrganic ChemistryMolecular Mimicrycell adhesionGeneral ChemistryFull Paperscarbohydrates (lipids)Sialyl-Lewis XchemistryCarbohydrate SequenceSelectinsAzideChemistry, an Asian Journal
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Levansucrases from Pseudomonas syringae pv. tomato and P. chlororaphis subsp. aurantiaca: Substrate specificity, polymerizing properties and usage of…

2011

Levansucrases of Pseudomonas syringae pv. tomato DC3000 (Lsc3) and Pseudomonas chlororaphis subsp. aurantiaca (also Pseudomonas aurantiaca) (LscA) have 73% identity of protein sequences, similar substrate specificity and kinetic properties. Both enzymes produce levan and fructooligosaccharides (FOS) of varied length from sucrose, raffinose and sugar beet molasses. A novel high-throughput chip-based nanoelectrospray mass spectrometric method was applied to screen alternative fructosyl acceptors for levansucrases. Lsc3 and LscA could both transfructosylate D-xylose, D-fucose, L- and D-arabinose, D-ribose, D-sorbitol, xylitol, xylobiose, D-mannitol, D-galacturonic acid and methyl-α-D-glucopyra…

Spectrometry Mass Electrospray IonizationSucroseRecombinant Fusion ProteinsMolecular Sequence DataPseudomonas syringaeBioengineeringFructoseXylitolApplied Microbiology and BiotechnologySubstrate SpecificityStructure-Activity Relationshipchemistry.chemical_compoundRaffinoseBacterial ProteinsPseudomonasPseudomonas aurantiacaPseudomonas syringaeXylobioseHistidineAmino Acid SequenceRaffinoseHistidinebiologySubstrate (chemistry)General Medicinebiology.organism_classificationPseudomonas chlororaphisFructansHexosyltransferaseschemistryBiochemistryMutagenesis Site-DirectedChromatography Thin LayerOligopeptidesSequence AlignmentBiotechnologyJournal of Biotechnology
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