Search results for "oligo"

showing 10 items of 1298 documents

Iron acquisition from Fe-pyoverdine by Arabidopsis thaliana.

2007

Taking into account the strong iron competition in the rhizosphere and the high affinity of pyoverdines for Fe(III), these molecules are expected to interfere with the iron nutrition of plants, as they do with rhizospheric microbes. The impact of Fe-pyoverdine on iron content of Arabidopsis thaliana was compared with that of Fe-EDTA. Iron chelated to pyoverdine was incorporated in a more efficient way than when chelated to EDTA, leading to increased plant growth of the wild type. A transgenic line of A. thaliana overexpressing ferritin showed a higher iron content than the wild type when supplemented with Fe-EDTA but a lower iron content when supplemented with Fe-pyoverdine despite its inc…

0106 biological sciencesChlorophyll[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyFMN ReductasePhysiologyIronArabidopsisReductasePseudomonas fluorescens01 natural sciencesPlant Roots03 medical and health scienceschemistry.chemical_compoundFMN reductaseArabidopsis thaliana[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyChelationRELATION PLANTE-MICROORGANISMECation Transport ProteinsEdetic Acid030304 developmental biology0303 health sciencesPyoverdinebiologyArabidopsis ProteinsACLWild typeARABIDOPSIS THALIANAGeneral Medicinebiology.organism_classificationPlants Genetically ModifiedFerritinchemistryBiochemistryChlorophyllFerritinsbiology.proteinAgronomy and Crop ScienceOligopeptides010606 plant biology & botany
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The asexual enchytraeid worm Cognettia sphagnetorum (Oligochaeta) has increased Cu resistance in polluted soil

2001

We studied Cu resistance in the asexual (reproduction through fragmentation) enchytraeid worms (Cognettia sphagnetorum, Oligochaeta) originating from two sites: one uncontaminated, and another contaminated by heavy metals. Adult worms were smaller and population density was lower at the polluted site. However, adults from the contaminated site had better survival in Cu-contaminated soil, but lower survival as juveniles (fragments). As we do not know the genetic basis of Cu resistance of the worms, it may have been reached by acclimatization via induced Cu regulation. Because fragmentation is the only mode of reproduction, all phenotypic properties (including resistance) of a parental genera…

0106 biological sciencesHealth Toxicology and Mutagenesismedia_common.quotation_subjectPopulation DynamicsDrug ResistanceAsexual reproduction010501 environmental sciencesToxicology010603 evolutionary biology01 natural sciencesAcclimatizationPopulation densityReproduction AsexualBotanyAnimalsSoil PollutantsOligochaeta0105 earth and related environmental sciencesmedia_commonFragmentation (reproduction)biologyGeneral MedicineEnchytraeidaebiology.organism_classificationAdaptation PhysiologicalSurvival AnalysisPollutionSoil contaminationOligochaetaBody ConstitutionReproductionCopperEnvironmental Pollution
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Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

2009

46 pages, 4 tables, 6 figures, 3 additinoal files.

0106 biological sciencesMESH: Genome PlantArabidopsis thalianaGene regulatory networkArabidopsis01 natural sciencesTranscriptomeGene Expression Regulation PlantArabidopsisMESH: Gene Expression Regulation DevelopmentalCluster AnalysisGene Regulatory NetworksMESH: ArabidopsisMESH: EcosystemMESH: Models GeneticOligonucleotide Array Sequence AnalysisMESH: Gene Regulatory NetworksGenetics0303 health sciencesMESH: Stress MechanicalbiologyMESH: Genomicsfood and beveragesGene Expression Regulation DevelopmentalGenomicsPhenotypeAlgorithmsGenome PlantMESH: MutationSystems biologyGenomicsMESH: AlgorithmsComputational biologyMESH: Arabidopsis ProteinsMESH: Phenotype03 medical and health sciencesMESH: Gene Expression Profiling[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: Gene Expression Regulation PlantEcosystem030304 developmental biologyModels GeneticMicroarray analysis techniquesArabidopsis ProteinsGene Expression ProfilingResearchfungiRobustness (evolution)biology.organism_classificationMESH: Cluster AnalysisGene expression profilingMutationMESH: Oligonucleotide Array Sequence AnalysisStress Mechanical010606 plant biology & botany
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Characterization of a proton pump from Acer pseudoplatanus cell microsomes

1985

Abstract An Acer pseudoplatanus cell microsomal fraction was enriched in ATPase by sedimentation through a sucrose cushion and treatment with Triton X-100. This activity, which reached 0.9 μmol P i min −1 mg −1 protein, was specific for ATP, slightly stimulated by K + , inhibited by orthovanadate and diethylstilbestrol, insensitive to oligomycin and azide, and had a K m - value of 0.51 mM for MgATP. ATP-dependent proton translocation was demonstrated by the ΔpH probe acridine orange. This activity had a optimum at pH 6.5, was substrate specific for ATP, and was strongly dependent on K + . Preparations of plasma membrane ATPase from A. pseudoplatanus cell culture thus posses biochemical prop…

0106 biological sciencesOligomycinATPaseDiaphragm pumpPlant ScienceBiology01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health scienceschemistry.chemical_compound[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsProton transportGenetics030304 developmental biologychemistry.chemical_classification0303 health sciencesAcridine orangeERABLE FAUX PLATANEGeneral MedicinePOMPE PROTONAcer pseudoplatanusbiology.organism_classificationEnzymeBiochemistrychemistrybiology.proteinMicrosomeAgronomy and Crop Science010606 plant biology & botanyPlant Science
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Phosphorylated intermediate of a transport ATPase and activity of protein kinase in membranes from corn roots

1983

A maize-root microsomal fraction was enriched in ATPase by treatment with Triton X-100. This activity, which reached 1.2-2.0/mumol Pi x min-1 x mg protein-1, was specific for ATP, very slightly stimulated by K+, inhibited by orthovanadate and diethylstilbestrol, resistant to oligomycin and azide, and had a Km of 1.2 mM MgATP. Incubation of the microsomal fraction with [gamma 32-P]ATP followed by electrophoresis in acid conditions revealed the presence of several phosphoproteins. The phosphorylation of a 110000-Mr polypeptide reached the steady-state level in less than 5 s and rapidly turned over the phosphate group. The phosphorylation level was an hyperbolic function of the [ATP] with a Km…

0106 biological sciencesOligomycinATPaseHydroxylamineHydroxylaminesZea mays01 natural sciencesBiochemistry03 medical and health scienceschemistry.chemical_compoundHydroxylamineCationsMicrosomes[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyVanadate[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyPhosphorylationProtein kinase ADiethylstilbestrol030304 developmental biologyAdenosine Triphosphatases2. Zero hunger0303 health sciencesbiologyCell MembraneBiological TransportVanadiumMolecular biologyMembranechemistryBiochemistryPhosphoproteinbiology.proteinPhosphorylationVanadatesPeptidesProtein Kinases010606 plant biology & botany
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Glutathione deficiency of the Arabidopsis mutant pad2-1 affects oxidative stress-related events, defense gene expression and hypersensitive response

2011

L'article original est publié par The American Society of Plant Biologists; International audience; The Arabidopsis (Arabidopsis thaliana) phytoalexin-deficient mutant pad2-1 displays enhanced susceptibility to a broad range of pathogens and herbivorous insects that correlates with deficiencies in the production of camalexin, indole glucosinolates, and salicylic acid (SA). The pad2-1 mutation is localized in the GLUTAMATE-CYSTEINE LIGASE (GCL) gene encoding the first enzyme of glutathione biosynthesis. While pad2-1 glutathione deficiency is not caused by a decrease in GCL transcripts, analysis of GCL protein level revealed that pad2-1 plants contained only 48% of the wild-type protein amoun…

0106 biological sciencesPhysiologyMutantGlutathione reductaseArabidopsisOligosaccharidesPlant Science01 natural scienceschemistry.chemical_compoundAnti-Infective AgentsGene Expression Regulation PlantCamalexinArabidopsis thaliana0303 health sciencesGlutathioneBiochemistryHost-Pathogen InteractionsDisease SusceptibilitySalicylic AcidOxidation-ReductionSignal TransductionHypersensitive responsePhytophthoradisease resistanceBiologyNitric Oxiderespiratory burst oxidase homolog d[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesStress PhysiologicalGeneticsPlants Interacting with Other Organismsglutathione reductase030304 developmental biologyPlant DiseasesArabidopsis ProteinsCell MembraneWild typeGlutathioneHydrogen Peroxidebiology.organism_classificationMolecular biologyPlant LeavesOxidative StresschemistryMutationglutathione-s-transferaseIsochorismate synthasebiology.proteinglutamate-cysteine ligaseReactive Oxygen Species010606 plant biology & botany
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Elicitor and resistance-inducing activities of -1,4 cellodextrins in grapevine, comparison with -1,3 glucans and -1,4 oligogalacturonides

2007

Cellodextrins (CD), water-soluble derivatives of cellulose composed of beta-1,4 glucoside residues, have been shown to induce a variety of defence responses in grapevine (Vitis vinifera L.) cells. The larger oligomers of CD rapidly induced transient generation of H2O2 and elevation in free cytosolic calcium, followed by a differential expression of genes encoding key enzymes of the phenylpropanoid pathway and pathogenesis-related (PR) proteins as well as stimulation of chitinase and beta-1,3 glucanase activities. Most of these defence reactions were also induced by linear beta-1,3 glucans (betaGlu) and alpha-1,4 oligogalacturonides (OGA) of different degree of polymerization (DP), but the i…

0106 biological sciencesPhysiology[SDV]Life Sciences [q-bio]Plant ScienceBiology01 natural sciences03 medical and health sciencesGene expressionBotanyGRAPEVINE[SDV.BV]Life Sciences [q-bio]/Vegetal Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesPhenylpropanoidINDUCED RESISTANCEOligosaccharideGlucanaseElicitor[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyCytosolEnzymechemistryBiochemistryChitinasebiology.proteinCELLODEXTRINSDEFENCE RESPONSES010606 plant biology & botany
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Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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Comment on “Global distribution of earthworm diversity”

2021

Phillips et al . (Reports, 25 October 2019, p. 480) incorrectly conclude that tropical earthworm communities are less diverse and abundant than temperate communities. This result is an artifact generated by some low-quality datasets, lower sampling intensity in the tropics, different patterns in richness-area relationships, the occurrence of invasive species in managed soils, and a focus on local rather than regional richness.

0106 biological sciencesmedia_common.quotation_subject[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study010603 evolutionary biology01 natural sciencesInvasive speciesGlobal distributionSoilTemperate climateAnimalsOligochaetamedia_commonMultidisciplinarybiologyEcologyEarthwormTropicsSampling (statistics)04 agricultural and veterinary sciences15. Life on landbiology.organism_classificationGeographyGlobal distributionEarthworm040103 agronomy & agriculture0401 agriculture forestry and fisheriesSoilsSpecies richnessDiversity (politics)
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Impact of a Plant Sterol- and Galactooligosaccharide-Enriched Beverage on Colonic Metabolism and Gut Microbiota Composition Using an In Vitro Dynamic…

2019

This document is he Accepted Manuscript version of a Published Work that appeared in final form in Journal of Agricultural and Food Chemistry, copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see https://doi.org/10.1021/acs.jafc.9b04796

0106 biological sciencesmedicine.medical_treatmentButyrateGut flora01 natural scienceschemistry.chemical_compoundShort-chain fatty acidsmedicineFood science16S rRNA gene sequencingchemistry.chemical_classificationSterol metabolitesbiologyChemistryGalactooligosaccharidePrebiotic010401 analytical chemistryLachnospiraceaeGeneral ChemistryMetabolismbiology.organism_classificationSterol0104 chemical sciencesDynamic colonic fermentationPropionateLactateGeneral Agricultural and Biological Sciences010606 plant biology & botany
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