Search results for "oligo"

showing 10 items of 1298 documents

Pga13 in Candida albicans is localized in the cell wall and influences cell surface properties, morphogenesis and virulence.

2011

The fungal cell wall is an essential organelle required for maintaining cell integrity and also plays an important role in the primary interactions between pathogenic fungi and their hosts. PGA13 encodes a GPI protein in the human pathogen Candida albicans, which is highly up-regulated during cell wall regeneration in protoplasts. The Pga13 protein contains a unique tandem repeat, which is present five times and is characterized by conserved spacing between the four cysteine residues. Furthermore, the mature protein contains 38% serine and threonine residues, and therefore probably is a highly glycosylated cell wall protein. Consistent with this, a chimeric Pga13-V5 protein could be localiz…

Antifungal AgentsSurface PropertiesCellMorphogenesisHyphaeCalcofluor-whiteKidneyMicrobiologyMicrobiologyCell wallFungal ProteinsMiceCell WallStress PhysiologicalOrganelleCandida albicansGeneticsmedicineCell AdhesionAnimalsHumansAmino Acid SequenceCell adhesionCandida albicansOligonucleotide Array Sequence AnalysisSequence DeletionFungal proteinMice Inbred BALB CbiologyVirulenceGene Expression ProfilingProtoplastsCandidiasisFlocculationbiology.organism_classificationCell biologymedicine.anatomical_structureFemaleSequence AlignmentFungal genetics and biology : FGB
researchProduct

Migration of Leukocytes into Filters Coated Homogeneously with Immune Complexes, Antigens, Lectins or Tripeptides

1980

Cellulose nitrate filters were incubated in solutions of albumin, a chemotactically active tripeptide (f-Met-Leu-Phe), immune complexes or lectins and afterwards washed with buffer. They showed a dose-dependent increased leukocyte migration, when tested in typical Boyden chambers in comparison to filters treated only with buffer. The tripeptide, the immune complexes and the lectins were stimulatory at very low concentrations and acted inhibitory at high concentrations. Treating filters with formaldehyde or glutardialdehyde had no clear stimulatory effect. These findings extend earlier observations obtained with casein. They show that cells move very effectively on solid substrata in the abs…

Antigen-Antibody ComplexLeukocyte migrationGuinea PigsImmunologySerum albuminAntigen-Antibody ComplexTripeptideAntigenCell MovementLectinsCaseinConcanavalin AAnimalsImmunology and AllergyPhytohemagglutininsSerum AlbuminOligopeptideChemotactic FactorsbiologyChemistryMicropore FiltersHematologyChemotaxis LeukocyteBiochemistryConcanavalin AImmunoglobulin Gbiology.proteinOligopeptidesGranulocytesImmunobiology
researchProduct

Secretion and antigenicity of hepatitis B virus small envelope proteins lacking cysteines in the major antigenic region.

1995

Abstract Disulfide bonds are of crucial importance for the structure and antigenic properties of the hepatitis B virus (HBV) envelope. We have evaluated the role of the eight highly conserved cysteines of the major antigenic region for assembly, secretion, and antigenicity of the envelope proteins. Mutants carrying single or multiple substitutions of alanine for cysteine were analyzed using epitope tagging and transient expression in COS-7 cells. The only single cysteines found to be indispensable for efficient secretion were Cys-107 and Cys-138, but double mutation of Cys-137 and Cys-139 also created a block to secretion. Poorly secreted mutants formed aberrant oligomeric structures. The a…

AntigenicityHepatitis B virusGlycosylationmedicine.drug_classMutantMolecular Sequence DataBiologymedicine.disease_causeMonoclonal antibodyEpitopeCell LineViral Envelope ProteinsVirologymedicineAnimalsSecretionCysteineDisulfidesHepatitis B virusAlanineImmunoassayHepatitis B Surface AntigensBase SequenceAntibodies MonoclonalOligonucleotides AntisenseHepatitis BMolecular biologyBiochemistryMutagenesis Site-DirectedCysteineVirology
researchProduct

Cytoprotective organoselenium compounds for oligodendrocytes

2021

Abstract Herein we report the synthesis of peptide-like and tetrazole-based organoselenium compounds via Ugi and Ugi-azide reactions, respectively. The organoselenium compounds' intrinsic cytoprotective and antioxidant capacities were evaluated in 158 N and 158JP murine oligodendrocytes. Furthermore, their redox properties were theoretically evaluated using Molecular Operating Environment-docking studies. Most of the compounds did not exhibit any cytotoxicity against the 158JP and 158 N cells. Among the tested compounds, the tetrazole- (e.g., 6, 7, and 9) and the pseudopeptide-based organoselenium compounds (e.g., 11, 15, and 17) displayed antioxidant properties. On the other hand, the quin…

AntioxidantCytoprotectiveGeneral Chemical Engineeringmedicine.medical_treatmentOrganoselenium02 engineering and technology010402 general chemistry01 natural sciencesRedoxlcsh:Chemistrychemistry.chemical_compoundOrganoselenium CompoundmedicineTetrazoleCytotoxicityTetrazoleOligodendrocytesGeneral Chemistry021001 nanoscience & nanotechnologyCombinatorial chemistry0104 chemical sciencesUgi reactionchemistrylcsh:QD1-999Antioxidant0210 nano-technologyArabian Journal of Chemistry
researchProduct

Computational approach to design of aptamers to the receptor binding domain of SARS-CoV-2

2021

The aim of the research. In this work, in silico selection of DNA-aptamers to the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein was performed using molecular modeling methods. Material and methods. A new computational approach to aptamer in silico selection is based on a cycle of simulations, including the stages of molecular modeling, molecular docking, molecular dynamic simulations, and quantum chemical calculations. To verify the obtained calculated results flow cytometry, fluorescence polarization, and small-angle X-ray scattering methods were applied. Results. An initial library consisted of 256 16-mer oligonucleotides was modeled. Based on molecular docking results, th…

Aptamer Receptor-binding domain SARS-CoV-2 Selectionkoronaviruksetreseptorit (biokemia)oligonukleotiditSARS-CoV-2kvanttikemiaSARS-CoV-2-virusaptamerselectionmolekyylidynamiikkareceptor-binding domainlaskennallinen kemia
researchProduct

Study of oligogalacturonides-triggered Nitric Oxide (NO) production provokes new questioning about the origin of NO biosynthesis in plants

2014

Addendum to: Rasul S, Dubreuil-Maurizi C, Lamotte O, Koen E, Poinssot B, Alcaraz G, et al. Nitric oxide production mediates oligogalacturonide-triggered immunity and resistance to Botrytis cinerea in Arabidopsis thaliana. Plant Cell Environ 2012; PMID:22394204; http://dx.doi. org/10.1111/j.1365-3040.2012.02505.x.; International audience; We investigated the production and function of nitric oxide (NO) in Arabidopsis thaliana leaf discs as well as whole plants elicited by oligogalacturonides (OGs). Using genetic, biochemical and pharmacological approaches, we provided evidence that OGs induced a Nitrate Reductase (NR)-dependent NO production together with an increased NR activity and NR tran…

Arabidopsis thalianaMutantArabidopsisOligosaccharidesPlant ScienceNitrate reductaseModels BiologicalNitric oxidechemistry.chemical_compoundBiosynthesisL-NAMEGene Expression Regulation PlantPlant defenseArabidopsisPlant defense against herbivoryArabidopsis thaliana[SDV.BV]Life Sciences [q-bio]/Vegetal Biologybiologyfungifood and beveragesNitric oxideBiotic stressbiology.organism_classificationOligogalacturonidesArticle AddendumNG-Nitroarginine Methyl EsterBiochemistrychemistryNitrate reductase
researchProduct

Comparison of global responses to mild deficiency and excess copper levels in Arabidopsis seedlings

2013

[EN] Copper is an essential micronutrient in higher plants, but it is toxic in excess. The fine adjustments required to fit copper nutritional demands for optimal growth are illustrated by the diverse, severe symptoms resulting from copper deficiency and excess. Here, a differential transcriptomic analysis was done between Arabidopsis thaliana plants suffering from mild copper deficiency and those with a slight copper excess. The effects on the genes encoding cuproproteins or copper homeostasis factors were included in a CuAt database, which was organised to collect additional information and connections to other databases. The categories overrepresented under copper deficiency and copper e…

ArabidopsisBiophysicsFunctional homologchemistry.chemical_elementCircadian clockTransporterBiochemistryBiomaterialsTranscriptomeSuperoxide dismutaseStomatal closureGene Expression Regulation PlantIron homeostasisArabidopsisThalianamedicineHomeostasisArabidopsis thalianaGeneOligonucleotide Array Sequence AnalysisGeneticsDose-Response Relationship DrugbiologyArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionSuperoxide DismutaseProteinMetals and AlloysBindingMicronutrientbiology.organism_classificationmedicine.diseaseCopperDNA-Binding ProteinschemistryBiochemistrySeedlingsChemistry (miscellaneous)biology.proteinFeedback loopTranscription factorTranscriptomeCopper deficiencyCopperTranscription FactorsMetallomics
researchProduct

CAUSE DI OLIGOANALGESIA IN AREA D’EMERGENZA AL TEMPO DELLE GRANDI IMMIGRAZIONI

2013

Obiettivo. L’AOU Policlinico di Palermo ha un centro dedi- cato ai bisogni sanitari degli immigrati regolari e clandestini, pertanto l’area di emergenza (PS) è il punto di riferimento di questa popolazione straniera. Il dolore, causa principale di accesso al PS, è sottotrattato. Le ipotesi delle differenze nella qualità del sollievo sono svariate, e comprendono anche etnia, razza, sesso ed età. Anche il modo in cui pazienti, di culture differenti, esprimono il proprio dolore e le interazioni tra medici e pazienti di diversa origine etnica possono influenza- re la valutazione. Abbiamo cercato di determinare se il sollie- vo dal dolore in PS è associato negativamente con la percezio- ne del m…

Area d'Emergenza Isolinguismo OligoanalgesiaSettore MED/41 - Anestesiologia
researchProduct

Oxidative stress response of tumor cells: microarray-based comparison between artemisinins and anthracyclines

2004

The antimalarial artemisinins also reveal profound cytotoxic activity against tumor cells. Artemisinins harbor an endoperoxide bridge whose cleavage results in the generation of reactive oxygen species (ROS) and/or artemisinin carbon-centered free radicals. Established cancer drugs such as anthracyclines also form ROS and free radicals that are responsible for the cardiotoxicity of anthracyclines. In contrast, artemisinins do not reveal cardiotoxicity. In the present investigation, we compared the cytotoxic activities of different artemisinins (artemisinin, artesunate, arteether, artemether, artemisitene, dihydroartemisinylester stereoisomers) in 60 cell lines of the National Cancer Institu…

ArtemisininsDaunorubicinAntineoplastic AgentsPharmacologyBiologymedicine.disease_causeBiochemistryAntimalarialsInhibitory Concentration 50parasitic diseasesTumor Cells CulturedmedicineAnimalsCluster AnalysisHumansIdarubicinAnthracyclinesDoxorubicinRNA MessengerArtemisininOligonucleotide Array Sequence AnalysisPharmacologyCardiotoxicityGene Expression ProfilingArtemisininsGene expression profilingOxidative StressDrug Screening Assays AntitumorOxidation-ReductionSesquiterpenesOxidative stressmedicine.drugBiochemical Pharmacology
researchProduct

Unambiguous identification of esters as oligomers in secondary organic aerosol formed from cyclohexene and cyclohexene/α-pinene ozonolysis

2007

Abstract. The build-up of oligomeric compounds during secondary organic aerosol (SOA) formation is subject of atmospheric research since several years. New particle formation and especially the SOA mass yield might be influenced significantly by oligomer formation. However, the chemical nature of observed oligomers and their formation pathways are still unclear. In this paper, the structural characterization of certain dimeric compounds (esters) formed during the ozonolysis of cyclohexene and cyclohexene/α-pinene mixtures are presented. The identification is based on the comparison of the mass spectra and the retention times (LC) of the oligomeric products with synthesized reference compoun…

Atmospheric SciencePineneOzonolysisChemistryCyclohexeneOligomerlcsh:QC1-999Terpenelcsh:Chemistrychemistry.chemical_compoundlcsh:QD1-999Yield (chemistry)Mass spectrumOrganic chemistryParticlelcsh:PhysicsAtmospheric Chemistry and Physics
researchProduct