Search results for "phosphatidylethanolamine"

showing 10 items of 51 documents

RAB3GAP1 and RAB3GAP2 modulate basal and rapamycin-induced autophagy

2014

Macroautophagy is a degradative pathway that sequesters and transports cytosolic cargo in autophagosomes to lysosomes, and its deterioration affects intracellular proteostasis. Membrane dynamics accompanying autophagy are mostly elusive and depend on trafficking processes. RAB GTPase activating proteins (RABGAPs) are important factors for the coordination of cellular vesicle transport systems, and several TBC (TRE2-BUB2-CDC16) domain-containing RABGAPs are associated with autophagy. Employing C. elegans and human primary fibroblasts, we show that RAB3GAP1 and RAB3GAP2, which are components of the TBC domain-free RAB3GAP complex, influence protein aggregation and affect autophagy at basal an…

GTPase-activating proteinlipid dropletsrab3 GTP-Binding ProteinsATG16L1DMSO dimethyl sulfoxideFEZ20302 clinical medicineATG autophagy-relatedPhagosomesDAPI 4’ 6-diamidino-2-phenylindoleSQSTM1 sequestosome 1ATG16L1MAP1LC3 microtubule-associated protein 1 light chain 3GFP green fluorescent protein0303 health sciencesGABARAP GABA(A) receptor-associated proteinGTPase-Activating ProteinsCell biologyRAB3GAP1RAB3GAP2RABGAP RAB GTPase activating proteinATG3autophagyCALCOCO2 calcium binding and coiled-coil domain 2Basic Research PaperseV empty vectorATG8ATG5PBS phosphate-buffered salineBiologyPE phosphatidylethanolamineTBC domain TRE2-BUB2-CDC16 domainBAG3GEF guanine nucleotide exchange factor03 medical and health sciencesC. elegans Caenorhabditis elegansAnimalsHumansCaenorhabditis elegansMolecular Biology030304 developmental biologySirolimusDPH 1 6-diphenyl-1 3 5-hexatrieneproteostasisAutophagyBiological TransportCell BiologyFEZ1Bafi bafilomycin A1FEZ fasciculation and elongation protein zetaNBR1 neighbor of BRCA1 gene 1ProteostasissiRNA small interfering RNABSA bovine serum albuminRabLysosomes030217 neurology & neurosurgeryAutophagy
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High-performance liquid chromatographic study of the regulation of phospholipid metabolism in cultured adrenocortical cells

1994

Abstract A rapid high-performance liquid chromatographic (HPLC) method for the separation of phospholipids was developed for minute samples of total lipids (ca. 200 μg). The method was applied to the study of the phospholipid metabolism in adrenocortical cell cultures. A complete separation of the different cellular phospholipid classes was achieved in 40 min. Good resolution of the phospholipid peaks was obtained, which allowed the collection of each individual class of phospholipids for further analysis of radioactivity and fatty acid composition by gas chromatography. When cells were incubated with [U-14C]glycerol or [U-14C]palmitate the bulk of the radioactivity was found in cellular ph…

GlycerolCardiolipinsPalmitatesPhospholipidHigh-performance liquid chromatographyMicechemistry.chemical_compoundTumor Cells CulturedGlycerolmedicineAnimalsCells CulturedChromatography High Pressure LiquidPhospholipidschemistry.chemical_classificationChromatographyAdrenal cortexPhosphatidylethanolaminesGeneral ChemistryMetabolismAdrenal Cortex NeoplasmsIn vitromedicine.anatomical_structurechemistryBiochemistryCell cultureAdrenal CortexPhosphatidylcholinesTetradecanoylphorbol AcetateIndicators and Reagentslipids (amino acids peptides and proteins)Polyunsaturated fatty acidJournal of Chromatography B: Biomedical Sciences and Applications
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Phospholipid distribution in the cytoplasmic membrane of Gram-negative bacteria is highly asymmetric, dynamic, and cell shape-dependent

2020

The cell shape of Gram-negative bacteria is maintained metabolically by asymmetric lipid distribution in biogenic plasma membrane.

Gram-negative bacteriaPhospholipidBiochemistryMicrobiology03 medical and health scienceschemistry.chemical_compoundGram-Negative BacteriaCardiolipinEscherichia coliInner membraneCell ShapePhospholipidsResearch Articles030304 developmental biologyPhosphatidylethanolamine0303 health sciencesMultidisciplinarybiologyBilayer030302 biochemistry & molecular biologyCell MembraneSciAdv r-articlesPeriplasmic spacebiology.organism_classificationchemistryCytoplasmBiophysicslipids (amino acids peptides and proteins)Research Article
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Identification of a putative membrane-inserted segment in the alpha-toxin of Staphylococcus aureus.

1994

To gain a fuller understanding of the regions of the Staphylococcus aureus alpha-toxin important in pore formation, we have used Forster dipole-dipole energy transfer to demonstrate that a central glycine-rich region of alpha-toxin (the so-called "hinge" region) inserts deeply into the bilayer on association of toxin with liposomes. Mutant alpha-toxins with unique cysteine (C) residues at positions 69 and 130 [Palmer, M., et al. (1993) J. Biol. Chem. 268, 11959) were reacted with the C-specific fluorophore acrylodan, which acted as an energy donor. The chosen acceptor was N-(7-nitrobenz-2-oxa-13- diazol-4-yl)-1,2-bis(hexadecanoyl)-sn-glycero-3-phosphoethanolamin e (NBD-PE). Measurement of t…

LiposomeStaphylococcus aureusQuenching (fluorescence)FluorophoreStereochemistryBilayerPhosphatidylethanolaminesBacterial ToxinsLipid BilayersMembrane ProteinsFluorescence PolarizationBiochemistryAcceptorLipidschemistry.chemical_compoundHemolysin ProteinsMembranechemistryMutagenesis Site-DirectedStaphylococcus aureus delta toxinCysteineFluorescent DyesBiochemistry
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The influence of phase transitions in phosphatidylethanolamine models on the activity of violaxanthin de-epoxidase

2008

In the present study, the influence of the phospholipid phase state on the activity of the xanthophyll cycle enzyme violaxanthin de-epoxidase (VDE) was analyzed using different phosphatidylethanolamine species as model lipids. By using (31)P NMR spectroscopy, differential scanning calorimetry and temperature dependent enzyme assays, VDE activity could directly be related to the lipid structures the protein is associated with. Our results show that the gel (L beta) to liquid-crystalline (L alpha) phase transition in these single lipid component systems strongly enhances both the solubilization of the xanthophyll cycle pigment violaxanthin in the membrane and the activity of the VDE. This pha…

Magnetic Resonance SpectroscopyBiophysicsAnalytical chemistryPhospholipidMonogalactosyldiacylglycerolXanthophyllsBiochemistryViolaxanthin de-epoxidaseModels BiologicalPhase Transitionchemistry.chemical_compoundDifferential scanning calorimetrySpinacia oleraceaPhase (matter)31P NMRInverted hexagonal phaseDe-epoxidationchemistry.chemical_classificationPhosphatidylethanolaminePhospholipid structuresChemistryPhosphatidylethanolaminesTemperatureCell BiologyNuclear magnetic resonance spectroscopyLipid MetabolismSolubilityArrheniusXanthophyllBiophysicsOxidoreductasesViolaxanthinBiochimica et Biophysica Acta (BBA) - Biomembranes
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Lipidomic profiling identifies signatures of metabolic risk

2020

Background: Metabolic syndrome (MetS), the clustering of metabolic risk factors, is associated with cardiovascular disease risk. We sought to determine if dysregulation of the lipidome may contribute to metabolic risk factors. Methods: We measured 154 circulating lipid species in 658 participants from the Framingham Heart Study (FHS) using liquid chromatography-tandem mass spectrometry and tested for associations with obesity, dysglycemia, and dyslipidemia. Independent external validation was sought in three independent cohorts. Follow-up data from the FHS were used to test for lipid metabolites associated with longitudinal changes in metabolic risk factors. Results: Thirty-nine lipids were…

Male0301 basic medicineResearch paperdhSL dihydrosphingolipidBMI body mass indexlcsh:MedicineATHEROGENIC LIPOPROTEINSBioinformaticsFHS Framingham Heart StudyPC phosphatidylcholinePESA Progression of Early Subclinical Atherosclerosis0302 clinical medicineFramingham Heart StudyRisk FactorsSAFHS San Antonio Family Heart StudyLC-MS/MS liquid chromatography-tandem mass spectrometryMedicineLongitudinal StudiesMetabolic riskPLASMA SPHINGOLIPID METABOLISMPOPULATIONlcsh:R5-920education.field_of_studySPHINGOMYELINCE cholesteryl esterDysglycemiaGeneral MedicineMiddle AgedLipidomePS phosphatidylserineCardiovascular diseaseLipidsMetabolic syndrome3. Good healthCARDIOVASCULAR-DISEASE030220 oncology & carcinogenesisHEARTMetS metabolic syndromeFemaleDisease SusceptibilityLGPL lysoglycerophospholipidSL sphingolipidlcsh:Medicine (General)LPE lysophosphatidylethanolamineAdultFDR false discovery rateTAG triacylglycerolPopulationCer ceramideCVD cardiovascular diseasePE phosphatidylethanolamineDENSITY-LIPOPROTEINRisk AssessmentGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesAnimalsHumanseducationT2DM type II diabetes mellitusAgedLPC lysophosphatidylcholineSM sphingomyelinbusiness.industryCERAMIDElcsh:RHDL-C High density lipoprotein cholesterolBiomarkerLipid Metabolismmedicine.diseaseObesitySphingolipidCross-Sectional Studies030104 developmental biologyDyslipidemiaERF Erasmus Family StudyLipidomicsMetabolic syndromeINDUCED INSULIN-RESISTANCEbusinessDAG diacylglycerolBody mass indexBiomarkersDyslipidemiaMRM multiple reaction monitoringFASTING GLUCOSE
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Stool Phospholipid Signature is Altered by Diet and Tumors

2014

Intake of saturated fat is a risk factor for ulcerative colitis (UC) and colon cancer. Changes in the microbiota have been implicated in the development of UC and colon cancer. The host and the microbiota generate metabolites that may contribute to or reflect disease pathogenesis. We used lipid class specific quantitative mass spectrometry to assess the phospholipid (PL) profile (phosphatidylcholine [PC], phosphatidylethanolamine [PE], phosphatidylinositol [PI], phosphatidylserine [PS]) of stool from mice fed a high fat (HFD) or control diet with or without induction of colitis-associated tumors using azoxymethane and dextran sodium sulfate. The microbiota was assessed using qPCR for severa…

MaleLifestyle Causes of CancerCarcinogenesisPhysiologySaturated fatlcsh:MedicineFeceschemistry.chemical_compound0302 clinical medicineMacromolecular Structure AnalysisMedicine and Health SciencesPrevotellalcsh:SciencePhospholipids0303 health sciencesLipid AnalysisMultidisciplinaryEcologybiologyMicrobiotaCancer Risk FactorsClostridium leptumPhosphatidylserineColitis3. Good healthPhysiological ParametersOncologyBiochemistryMedical MicrobiologyNutritional Correlates of CancerColonic NeoplasmsFemale030211 gastroenterology & hepatologyAnatomyResearch Articlemedicine.medical_specialtyColonPhospholipidGastroenterology and HepatologyDiet High-FatMicrobiologyMicrobial Ecology03 medical and health sciencesInternal medicineBiomarkers TumormedicineAnimalsObesityColitisMolecular Biology030304 developmental biologyColorectal CancerPhosphatidylethanolamineAzoxymethaneBody Weightlcsh:RBiology and Life SciencesCancers and Neoplasmsmedicine.diseasebiology.organism_classificationMice Inbred C57BLGastrointestinal TractEndocrinologychemistrylcsh:QMicrobiomePhysiological ProcessesDigestive SystemPLoS ONE
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Erythrocyte Phospholipid and Polyunsaturated Fatty Acid Composition in Diabetic Retinopathy

2014

Background: Long chain polyunsaturated fatty acids (LCPUFAs) including docosahexaenoic acid and arachidonic acid are suspected to play a key role in the pathogenesis of diabetes. LCPUFAs are known to be preferentially concentrated in specific phospholipids termed as plasmalogens. This study was aimed to highlight potential changes in the metabolism of phospholipids, and particularly plasmalogens, and LCPUFAs at various stages of diabetic retinopathy in humans. Methodology and Principal Findings: We performed lipidomic analyses on red blood cell membranes from controls and mainly type 2 diabetes mellitus patients with or without retinopathy. The fatty acid composition of erythrocytes was det…

MaleOrganes des senslcsh:MedicineType 2 diabetesBiochemistrySeverity of Illness Indexchemistry.chemical_compoundMELLITUS0302 clinical medicineMedicine and Health SciencesMedicineOXIDATIVE STRESSlcsh:ScienceRETINAPhospholipidschemistry.chemical_classification0303 health sciencesCOMPLICATIONSMultidisciplinaryINSULIN SENSITIVITYFatty AcidsDiabetic retinopathyMiddle AgedLipids3. Good healthDocosahexaenoic acid[ SDV.MHEP.OS ] Life Sciences [q-bio]/Human health and pathology/Sensory OrgansFatty Acids UnsaturatedPhosphatidylcholinesRetinal DisordersArachidonic acidlipids (amino acids peptides and proteins)FemalePolyunsaturated fatty acidRetinopathyResearch ArticleEXPRESSIONAdultmedicine.medical_specialtySensory OrgansPlasmalogensPhospholipidMédecine humaine et pathologie030209 endocrinology & metabolism03 medical and health sciencesInternal medicineDiabetes mellitus[ SDV.MHEP ] Life Sciences [q-bio]/Human health and pathologyDiabetes MellitusHumans[SDV.MHEP.OS]Life Sciences [q-bio]/Human health and pathology/Sensory OrgansRetinopathy030304 developmental biologyAgedDiabetic Retinopathybusiness.industryPhosphatidylethanolamineslcsh:RErythrocyte MembraneBiology and Life SciencesDOCOSAHEXAENOIC ACIDmedicine.diseaseLipid MetabolismENDOTHELIAL-CELLSDOCOSAHEXAENOIC ACID;INSULIN SENSITIVITY;ENDOTHELIAL-CELLS;OXIDATIVE STRESS;RETINA;LIPIDS;DEFORMABILITY;COMPLICATIONS;EXPRESSION;MELLITUSOphthalmologyEndocrinologyDiabetes Mellitus Type 1chemistryDiabetes Mellitus Type 2Metabolic DisordersCase-Control Studieslcsh:QHuman health and pathologybusiness[SDV.MHEP]Life Sciences [q-bio]/Human health and pathologyDEFORMABILITYPLoS ONE
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Comparative study of serine-plasmalogens in human retina and optic nerve: identification of atypical species with odd carbon chains

2012

International audience; The objective of this work was to detect and identify phosphatidylserine plasmalogen species in human ocular neurons represented by the retina and the optic nerve. Plasmalogens (vinyl-ether bearing phospholipids) are commonly found in the forms of phosphatidylcholine and phosphatidylethanolamine in numerous mammalian cell types, including the retina. While their biological functions are still unclear, the alteration of cellular plasmalogen content has been associated with several human disorders such as Rhizomelic Chondrodysplasia Punctata Type 2 and Primary Open-Angle Glaucoma.By using liquid-chromatography coupled to high resolution and tandem mass spectrometry, we…

MalePlasmalogenPlasmalogensQD415-436PhosphatidylserinesBiologyTandem mass spectrometryBiochemistryRetinaSerine03 medical and health scienceschemistry.chemical_compound0302 clinical medicineEndocrinologySpecies SpecificityTandem Mass Spectrometryphospholipids/phosphatidylserinePhosphatidylcholineSerinemedicineFood and NutritionHumansphospholipidsmass spectrometryAged030304 developmental biologyAged 80 and overchemistry.chemical_classificationPhosphatidylethanolamine0303 health sciencesRhizomelic chondrodysplasia punctataFatty acidOptic NerveCell BiologyPhosphatidylserineEye/retinamedicine.diseaseCarbonchemistryBiochemistryAlimentation et NutritionFemalePatient-Oriented and Epidemiological Research[SDV.AEN]Life Sciences [q-bio]/Food and Nutrition030217 neurology & neurosurgeryChromatography LiquidJournal of Lipid Research
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Regulation of Calcium Channel Activity by Lipid Domain Formation in Planar Lipid Bilayers

2003

The sarcoplasmic reticulum channel (ryanodine receptor) from cardiac myocytes was reconstituted into planar lipid bilayers consisting of 1-palmitoyl-2-oleoyl-phosphatidylethanolamine (POPE) and 1-palmitoyl-2-oleoyl-phosphatidylcholine (POPC) in varying ratios. The channel activity parameters, i.e., open probability and average open time and its resolved short and long components, were determined as a function of POPE mole fraction (X(PE)) at 22.4 degrees C. Interestingly, all of these parameters exhibited a narrow and pronounced peak at X(PE) approximately 0.80. Differential scanning calorimetric measurements on POPE/POPC liposomes with increasing X(PE) indicated that the lipid bilayer ente…

Membrane FluidityProtein ConformationLipid BilayersBiophysicsAnalytical chemistryMolecular Conformation010402 general chemistryElectric Capacitance01 natural sciencesMembrane Potentials03 medical and health scienceschemistry.chemical_compoundStructure-Activity RelationshipProtein structureMembrane MicrodomainsChannels Receptors and TransportersMembrane fluidityLipid bilayer phase behaviorLipid bilayerPOPC030304 developmental biologyMembrane potential0303 health sciencesLiposomeEndoplasmic reticulumPhosphatidylethanolaminesMembranes ArtificialRyanodine Receptor Calcium Release Channel0104 chemical scienceschemistry13. Climate actionBiophysicsPhosphatidylcholineslipids (amino acids peptides and proteins)Calcium ChannelsIon Channel Gating
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