Search results for "quantitative"

showing 10 items of 2409 documents

STATISTICAL MECHANICS OF NONCLASSIC SOLITONIC STRUCTURES-BEARING DNA SYSTEM

2011

We theoretically investigate the thermodynamic properties of modified oscillator chain proposed by Peyrard and Bishop. This model obtained by adding the quartic anharmonicity term to the coupling in the Peyrard–Bishop model is useful to model the coexistence of various phases of the molecule during the denaturation phenomenon. Within the model, the negative anharmonicity is responsible for the sharpness of calculated melting curves. We perform the transfer integral calculations to demonstrate that the model leads to a good agreement with known experimental results for DNA.

PhysicsCouplingPhysics::Biological PhysicsQuantitative Biology::BiomoleculesBearing (mechanical)AnharmonicityThermodynamicsStatistical and Nonlinear PhysicsStatistical mechanicsCondensed Matter Physics01 natural sciences010305 fluids & plasmaslaw.inventionChain (algebraic topology)lawQuartic function0103 physical sciencesMoleculeDenaturation (biochemistry)010306 general physicsInternational Journal of Modern Physics B
researchProduct

Solvent Effects on Electronically Excited States Using the Conductor-Like Screening Model and the Second-Order Correlated Method ADC(2).

2015

The conductor-like screening model (COSMO) is used to treat solvent effects on excited states within a correlated method based on the algebraic-diagrammatic construction through second-order ADC(2). The origin of solvent effects is revisited, and it is pointed out that two types of contributions have to be considered. One effect is due to the change of the solute's charge distribution after excitation, which triggers a reorganization of the solvent. Initially, only the electronic degrees of freedom adapt to the new charge distribution (nonequilibrium case); for sufficiently long-lived states, the reorientation of the solvent molecules contributes, as well (equilibrium case). The second effe…

PhysicsCouplingQuantitative Biology::BiomoleculesCharge densityNon-equilibrium thermodynamicsNanotechnologyChromophoreComputer Science ApplicationsCondensed Matter::Soft Condensed MatterSolventChemical physicsExcited statePhysics::Chemical PhysicsPhysical and Theoretical ChemistrySolvent effectsExcitationJournal of chemical theory and computation
researchProduct

Sensitivity to Initial Conditions in an Extended Activator--Inhibitor Model for the Formation of Patterns

2018

Despite simplicity, the synchronous cellular automaton [D.A. Young, Math. Biosci. 72, 51 (1984)] enables reconstructing basic features of patterns of skin. Our extended model allows studying the formatting of patterns and their temporal evolution also on the favourable and hostile environments. As a result, the impact of different types of an environment is accounted for the dynamics of patterns formation. The process is based on two diffusible morphogens, the short-range activator and the long-range inhibitor, produced by differentiated cells (DCs) represented as black pixels. For a neutral environment, the extended model reduces to the original one. However, even the reduced model is stat…

PhysicsFOS: Physical sciencesGeneral Physics and AstronomyComputational Physics (physics.comp-ph)Reduced modelCellular automatonExtended modelAverage sizeInitial distributionFOS: Biological sciencesCell Behavior (q-bio.CB)Quantitative Biology - Cell BehaviorBiological systemPhysics - Computational PhysicsActa Physica Polonica B
researchProduct

Field analysis of the magnetic systems for tubular linear reluctance motors

2005

We report a study of tubular linear reluctance motors (TLRMs) in various types of magnetic circuits. We carried out magnetic field analyses and calculated integral parameters of the field. We also determined static characteristics and electromagnetic parameters of the motor. We found good agreement between our calculations and tests of the motor with sinusoidal excitation.

PhysicsField (physics)Magnetic reluctanceMechanicsLinear motorField analysisequipment and suppliesFinite element methodElectronic Optical and Magnetic MaterialsMagnetic fieldReluctance motorQuantitative Biology::Subcellular ProcessesMagnetic circuitNuclear magnetic resonanceElectrical and Electronic Engineeringhuman activitiesIEEE Transactions on Magnetics
researchProduct

Taming conformational heterogeneity in and with vibrational circular dichroism spectroscopy

2019

Chemical science 10, 7680 -7689 (2019). doi:10.1039/C9SC02866H

PhysicsFlexibility (engineering)FELIX Condensed Matter PhysicsQuantitative Biology::Biomolecules/dk/atira/pure/sustainabledevelopmentgoals/affordable_and_clean_energy010405 organic chemistryMolecular and BiophysicsGeneral ChemistryFunction (mathematics)540010402 general chemistry01 natural sciencesSpectral line3. Good health0104 chemical sciencesHighly sensitiveChemistryddc:540Vibrational circular dichroismStatistical physicsSDG 7 - Affordable and Clean EnergySpectroscopyConformational isomerismReliability (statistics)
researchProduct

Noise effects in two different biological systems

2009

We investigate the role of the colored noise in two biological systems: (i) adults of Nezara viridula (L.) (Heteroptera: Pentatomidae), and (ii) polymer translocation. In the first system we analyze, by directionality tests, the response of N. viridula individuals to subthreshold signals plus noise in their mating behaviour. The percentage of insects that react to the subthreshold signal shows a nonmonotonic behaviour, characterized by the presence of a maximum, as a function of the noise intensity. This is the signature of the non-dynamical stochastic resonance phenomenon. By using a “soft” threshold model we find that the maximum of the input-output cross correlation occurs in the same ra…

PhysicsFluctuation phenomena random processes noise and Brownian motionQuantitative Biology::BiomoleculesCondensed matter physicsBistabilityStochastic resonanceStochastic processMolecular dynamics Brownian dynamicThermal fluctuationsMolecular interactionWhite noiseNoise in biological systemCondensed Matter PhysicsMolecular physicsSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Electronic Optical and Magnetic MaterialsColors of noiseBrownian dynamicsPolymermembrane-protein interactionsNoise (radio)Biophysical mechanisms of interaction
researchProduct

Moment Equations for a Spatially Extended System of Two Competing Species

2005

The dynamics of a spatially extended system of two competing species in the presence of two noise sources is studied. A correlated dichotomous noise acts on the interaction parameter and a multiplicative white noise affects directly the dynamics of the two species. To describe the spatial distribution of the species we use a model based on Lotka-Volterra (LV) equations. By writing them in a mean field form, the corresponding moment equations for the species concentrations are obtained in Gaussian approximation. In this formalism the system dynamics is analyzed for different values of the multiplicative noise intensity. Finally by comparing these results with those obtained by direct simulat…

PhysicsFluctuation phenomena random processes noise and Brownian motionSettore FIS/02 - Fisica Teorica Modelli E Metodi MatematiciStatistical Mechanics (cond-mat.stat-mech)Multiplicative white noiseFOS: Physical sciencesFluctuation phenomena random processes noise and Brownian motion; Nonlinear dynamics and nonlinear dynamical systems; Population dynamics and ecological pattern formationCondensed Matter PhysicsSpatial distributionMultiplicative noiseElectronic Optical and Magnetic MaterialsSystem dynamicsMean field theorySpatial ecologyQuantitative Biology::Populations and EvolutionStatistical physicsNonlinear dynamics and nonlinear dynamical systemCondensed Matter - Statistical MechanicsMoment equationsCoupled map latticePopulation dynamics and ecological pattern formation
researchProduct

A quantitative analysis of university student reasoning lines in the field of thermally activated phenomena

2018

In this contribution we present a research aimed at studying the effectiveness of two workshops in improving reasoning skills in undergraduate students. Both the workshops are based on the Feynman Unifying Approach. A questionnaire containing six open-ended questions on the temperature dependence of evaporation of a liquid and of a chemical reaction was administered to the students of both groups before instruction. A second one, similar to the first but focused on a physical content different from both the pre-instruction test one and the content dealt with during the workshops, was administered after instruction. The responses to the pre- and post-instruction questionnaires are analyzed b…

PhysicsHistoryInquiry-Based Science EducationCluster AnalysiField (physics)Quantitative analysis (finance)Settore FIS/08 - Didattica E Storia Della FisicaFeynman’s Unifying ApproachStatistical physicsSettore FIS/03 - Fisica Della MateriaSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Computer Science ApplicationsEducationJournal of Physics: Conference Series
researchProduct

Performance study of the fast timing Cherenkov detector based on a microchannel plate PMT

2017

Prototype of the fast timing Cherenkov detector, applicable in high-energy collider experiments, has been developed basing on the modified Planacon XP85012 MCP-PMT and fused silica radiators. We present the reasons and description of the MCP-PMT modification, timing and amplitude characteristics of the prototype including the summary of the detector's response on particle hits at oblique angles and MCP-PMT performance at high illumination rates.

PhysicsHistoryPhotomultiplierPhysics::Instrumentation and Detectors010308 nuclear & particles physicsbusiness.industryCherenkov detectorQuantitative Biology::Tissues and OrgansDetectorAstrophysics::Instrumentation and Methods for Astrophysics01 natural sciencesParticle detectorComputer Science ApplicationsEducationlaw.inventionOpticslaw0103 physical sciencesScintillation counterMeasuring instrumentMicrochannel plate detector010306 general physicsbusinessColliderJournal of Physics: Conference Series
researchProduct

Analog simulation of neural information propagation using an electrical FitzHugh-Nagumo lattice

2004

International audience; A nonlinear electrical lattice modelling neural information propagation is presented. It is shown that our system is an analog simulator of the FitzHugh-Nagumo equations, and hence supports pulse propagation with the appropriate properties.

PhysicsInformation propagationQuantitative Biology::Neurons and CognitionGeneral MathematicsApplied MathematicsQuantitative Biology::Tissues and OrgansGeneral Physics and AstronomyStatistical and Nonlinear PhysicsFitzhugh nagumo01 natural sciences010305 fluids & plasmasPulse propagationNonlinear system[NLIN.NLIN-PS]Nonlinear Sciences [physics]/Pattern Formation and Solitons [nlin.PS]Lattice (order)0103 physical sciences[ NLIN.NLIN-PS ] Nonlinear Sciences [physics]/Pattern Formation and Solitons [nlin.PS]Statistical physicsFitzHugh–Nagumo model010306 general physicsNonlinear Sciences::Pattern Formation and Solitons
researchProduct