Search results for "quantitative"

showing 10 items of 2409 documents

Critical study of the quantity theory of money in the history of prices crisis

2014

The Quantity Theory of money which always links the increase in the high-Powered money supply and the general rise in prices is one of the oldest concepts in economics. After to have been the subject of many controversies at different times, it seems nowadays to hold less attention from the economists because the dispute is dissipated in a kind of religious choice to believe or not to believe to quantity theory. This theory officially influences the monetary policy of most of central banks in the world that bind conventional measures to control the money supply to curb inflation process. In many orthodox economics’ textbooks, the quantity theory is still deployed in perpetuum to explain the…

PrixEquilibriumMoneyPriceValeurDichotomyPurchasing powerInflationÉquilibreMonnaieQuantity theoryPouvoir d'achat[SHS.ECO] Humanities and Social Sciences/Economics and FinanceDichotomieThéorie quantitativeValue
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A Approach to Clinical Proteomics Data Quality Control and Import

2011

International audience; Biomedical domain and proteomics in particular are faced with an increasing volume of data. The heterogeneity of data sources implies heterogeneity in the representation and in the content of data. Data may also be incorrect, implicate errors and can compromise the analysis of experiments results. Our approach aims to ensure the initial quality of data during import into an information system dedicated to proteomics. It is based on the joint use of models, which represent the system sources, and ontologies, which are use as mediators between them. The controls, we propose, ensure the validity of values, semantics and data consistency during import process.

Process (engineering)Computer sciencemedia_common.quotation_subject02 engineering and technologyOntology (information science)Proteomicscomputer.software_genreDomain (software engineering)03 medical and health sciences020204 information systems[ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM]0202 electrical engineering electronic engineering information engineeringInformation systemQuality (business)[ SDV.BIBS ] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]030304 developmental biologymedia_common0303 health sciences[INFO.INFO-DB]Computer Science [cs]/Databases [cs.DB][SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Data science[ INFO.INFO-DB ] Computer Science [cs]/Databases [cs.DB]Data qualityData mining[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]computer
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Present and Future of the E-Learning in Economics Schools and Faculties

2018

<p class="Textoindependiente21">The goal of this paper is to justify/motivate the existence of MOOCs of quantitative subjects, particularly of Mathematics and Statistics, in the degrees taught in Faculties of Economics and Business, complementary to the standard university courses. The changes in curricula carried out in Spain in the last decade have boosted access to these faculties’ degrees for all kind of students. However, some of these students lack skills and abilities enough to successfully tackle the first university Mathematics and Statistics courses, as these are currently designed. Empirical studies support the use of multimedia material as a very effective supporting tool …

Process (engineering)MOOCsmedia_common.quotation_subjectE-learning (theory)UniversitatsInternational businessEconomialcsh:Technologylcsh:Social SciencesEmpirical researchClickers0502 economics and businesslcsh:Technology (General)Mathematics educationComputingMilieux_COMPUTERSANDEDUCATIONlcsh:Social sciences (General)Curriculummedia_commonMovieslcsh:T05 social sciences050301 educationBologna Processlcsh:HTICsQuantitative subjectslcsh:T1-995050211 marketinglcsh:H1-990503 educationTourismDiversity (politics)
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The Use of Rule-Based and QSPR Approaches in ADME Profiling: A Case Study on Caco-2 Permeability.

2013

During the early ADME profiling the development of simple, interpretable and reliable in silico tools is very important. In this study, rule-based and QSPR approaches were investigated using a large Caco-2 permeability database. Three permeability classes were determined: high (H), moderate (M) and low (L). The main physicochemical properties related with permeability were ranked as follows: Polar Surface Area (PSA)>Lipophilicity (logP/logD)>Molecular Weight (MW)>number of Hydrogen Bond donors and acceptors>Ionization State>number of Rotatable Bonds>number of Rings. The best rule, based on the combination of PSA-MW-logD (3PRule), was able to identify the H, M and L classes with accuracy of …

Profiling (computer programming)Quantitative structure–activity relationshipChemistryOrganic ChemistryRule-based systemCombinatorial chemistryComputer Science ApplicationsPolar surface areaBinary classificationStructural BiologyTest setDrug DiscoveryLipophilicityMolecular MedicineBiological systemADMEMolecular informatics
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Sequence Determines Degree of Knottedness in a Coarse-Grained Protein Model

2015

Knots are abundant in globular homopolymers but rare in globular proteins. To shed new light on this long-standing conundrum, we study the influence of sequence on the formation of knots in proteins under native conditions within the framework of the hydrophobic-polar (HP) lattice protein model. By employing large scale Wang-Landau simulations combined with suitable Monte Carlo trial moves we show that, even though knots are still abundant on average, sequence introduces large variability in the degree of self-entanglements. Moreover, we are able to design sequences which are either almost always or almost never knotted. Our findings serve as proof of concept that the introduction of just o…

Protein ConformationFOS: Physical sciencesGeneral Physics and AstronomyCondensed Matter - Soft Condensed Matterstomatognathic systemComputer SimulationMathematicsSequence (medicine)chemistry.chemical_classificationQuantitative Biology::BiomoleculesDegree (graph theory)Proteinsfood and beveragesBiomolecules (q-bio.BM)Knot theoryAmino acidsurgical procedures operativeModels ChemicalQuantitative Biology - BiomoleculeschemistryFOS: Biological sciencesProtein modelSoft Condensed Matter (cond-mat.soft)Biological systemHydrophobic and Hydrophilic InteractionsMonte Carlo MethodPhysical Review Letters
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The impact of high hydrostatic pressure on structure and dynamics of beta-lactoglobulin

2013

Abstract Methods Combining small-angle X-ray and neutron scattering measurements with inelastic neutron scattering experiments, we investigated the impact of high hydrostatic pressure on the structure and dynamics of β-lactoglobulin (βLG) in aqueous solution. Background βLG is a relatively small protein, which is predominantly dimeric in physiological conditions, but dissociates to monomer below about pH 3. Results High-pressure structural results show that the dimer–monomer equilibrium, as well as the protein–protein interactions, are only slightly perturbed by pressure, and βLG unfolding is observed above a threshold value of 3000 bar. In the same range of pressure, dynamical results put …

Protein ConformationHydrostatic pressureBiophysics02 engineering and technologyLactoglobulinsProtein dynamicsNeutron scatteringNeutron scattering010402 general chemistry01 natural sciencesBiochemistryInelastic neutron scatteringchemistry.chemical_compound[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyProtein foldingMolecular BiologyHydrostatic pressureQuantitative Biology::BiomoleculesAqueous solutionSmall angle X-ray and neutron scatteringProtein dynamics021001 nanoscience & nanotechnology0104 chemical sciencesCrystallographyMonomerchemistryChemical physicsCompressibilityProtein folding0210 nano-technology
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Reconstructing the free-energy landscape of Met-enkephalin using dihedral principal component analysis and well-tempered metadynamics

2013

Well-Tempered Metadynamics (WTmetaD) is an efficient method to enhance the reconstruction of the free-energy surface of proteins. WTmetaD guarantees a faster convergence in the long time limit in comparison with the standard metadynamics. It still suffers however from the same limitation, i.e. the non trivial choice of pertinent collective variables (CVs). To circumvent this problem, we couple WTmetaD with a set of CVs generated from a dihedral Principal Component Analysis (dPCA) on the Ramachadran dihedral angles describing the backbone structure of the protein. The dPCA provides a generic method to extract relevant CVs built from internal coordinates. We illustrate the robustness of this …

Protein ConformationSurface PropertiesEnkephalin MethionineFOS: Physical sciencesGeneral Physics and AstronomyDihedral angle01 natural scienceslaw.invention03 medical and health scienceslaw0103 physical sciencesComputer SimulationCartesian coordinate systemPhysics - Biological PhysicsStatistical physicsPhysical and Theoretical ChemistryProtein secondary structureReference modelComputingMilieux_MISCELLANEOUS030304 developmental biologyMathematicsPrincipal Component AnalysisQuantitative Biology::Biomolecules0303 health sciences010304 chemical physicsMetadynamicsEnergy landscapeBiomolecules (q-bio.BM)Condensed Matter - Other Condensed Matter[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryQuantitative Biology - BiomoleculesBiological Physics (physics.bio-ph)FOS: Biological sciencesPrincipal component analysis[ CHIM.THEO ] Chemical Sciences/Theoretical and/or physical chemistryPhysics::Accelerator PhysicsThermodynamicsEnergy MetabolismAlgorithmsOther Condensed Matter (cond-mat.other)Ramachandran plot
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Curvature and Torsion of Protein Main Chain as Local Order Parameters of Protein Unfolding

2020

International audience; Thermal protein unfolding resembles a global (two-state) phase transition. At the local scale, protein unfolding is, however, heterogeneous and probe dependent. Here, we consider local order parameters defined by the local curvature and torsion of the protein main chain. Because chemical shift (CS) measured by NMR spectroscopy is extremely sensitive to the local atomic environment, CS has served as a local probe of thermal unfolding of proteins by varying the position of the atomic isotope along the amino-acid sequence. The variation of the CS of each C(alpha) atom along the sequence as a function of the temperature defines a local heat-induced denaturation curve. We…

Protein DenaturationProtein FoldingPhase transitionProtein ConformationThermodynamics010402 general chemistryCurvature01 natural sciencesProtein Structure SecondaryArticleQuantitative Biology::Subcellular Processes03 medical and health sciencesChain (algebraic topology)Materials Chemistry[CHIM]Chemical SciencesAmino Acid SequencePhysical and Theoretical ChemistryProtein Unfolding030304 developmental biologyPhysics[PHYS]Physics [physics]0303 health sciencesQuantitative Biology::BiomoleculesQuantitative Biology::Molecular NetworksLocal scaleTorsion (mechanics)Energy landscape0104 chemical sciencesSurfaces Coatings and FilmsOrder (biology)Unfolded protein responseThermodynamics
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A Stevedore's protein knot.

2009

Protein knots, mostly regarded as intriguing oddities, are gradually being recognized as significant structural motifs. Seven distinctly knotted folds have already been identified. It is by and large unclear how these exceptional structures actually fold, and only recently, experiments and simulations have begun to shed some light on this issue. In checking the new protein structures submitted to the Protein Data Bank, we encountered the most complex and the smallest knots to date: A recently uncovered α-haloacid dehalogenase structure contains a knot with six crossings, a so-called Stevedore knot, in a projection onto a plane. The smallest protein knot is present in an as yet unclassified …

Protein FoldingHydrolasesProtein ConformationComputational Biology/Macromolecular Structure Analysis02 engineering and technologyBiologyMolecular Dynamics SimulationComputational Biology/Molecular DynamicsCombinatorics03 medical and health sciencesCellular and Molecular NeuroscienceKnot (unit)Protein structureGeneticsStructural motifDatabases ProteinMolecular Biologylcsh:QH301-705.5Ecology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesTopological complexityQuantitative Biology::BiomoleculesEcologycomputer.file_format021001 nanoscience & nanotechnologyProtein Data BankMathematics::Geometric TopologyComputational Theory and MathematicsBiochemistrylcsh:Biology (General)Modeling and SimulationProtein foldingStevedore knot0210 nano-technologySingle loopcomputerResearch ArticlePLoS Computational Biology
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Structures and folding pathways of topologically knotted proteins

2010

In the last decade, a new class of proteins has emerged that contain a topological knot in their backbone. Although these structures are rare, they nevertheless challenge our understanding of protein folding. In this review, we provide a short overview of topologically knotted proteins with an emphasis on newly discovered structures. We discuss the current knowledge in the field, including recent developments in both experimental and computational studies that have shed light on how these intricate structures fold.

Protein FoldingQuantitative Biology::BiomoleculesProtein ConformationChemistryProteinsNanotechnologyComputational biologyCondensed Matter PhysicsProtein structureComputer GraphicsAnimalsHumansComputer SimulationGeneral Materials ScienceProtein foldingAmino Acid SequenceDatabases ProteinKnot (mathematics)Journal of Physics: Condensed Matter
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