Search results for "soil"

showing 10 items of 3493 documents

Retama species growing in different ecological-climatic areas of northeastern Algeria have a narrow range of rhizobia that form a novel phylogenetic …

2009

International audience; Sixty-seven isolates were isolated from nodules collected on roots of Mediterranean shrubby legumes Retama raetam and Retama sphaerocarpa growing in seven ecological-climatic areas of northeastern Algeria. Genetic diversity of the Retama isolates was analyzed based on genotyping by restriction fragment length polymorphism of PCR-amplified fragments of the 16S rRNA gene, the intergenic spacer (IGS) region between the 16S and 23S rRNA genes (IGS), and the symbiotic genes nifH and nodC. Eleven haplotypes assigned to the Bradyrhizobium genus were identified. Significant biogeographical differentiation of the rhizobial populations was found, but one haplotype was predomin…

PHYLOGENYClimateRETAMAMolecular Sequence DataDIVERSITYRetamaBRADYRHYZOBIUMApplied Microbiology and BiotechnologyMicrobiologyBradyrhizobiumDNA RibosomalPlant RootsRhizobia03 medical and health sciencesRNA Ribosomal 16SBotanySYMBIOTIC GENESBradyrhizobiumCladeEcology Evolution Behavior and SystematicsBradyrhizobium elkaniiEcosystemSoil Microbiology030304 developmental biology0303 health sciencesGenetic diversitybiologyPhylogenetic treeBase SequenceGeography030306 microbiologyEcologyFabaceaebiology.organism_classificationDNA FingerprintingHousekeeping gene[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyGenes BacterialAlgeriaDNA IntergenicMULTILOCUS SEQUENCE ANALYSIS
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Build up of patches caused by Rhizoctonia solani

2010

Rhizoctonia solani is a complex species that is composed of different anastomosis groups (AG). Although these different AGs show differences in their host ranges, generally R. solani is a phytopathogenic species with a wide spectrum of hosts. It has the ability to grow as a saprotroph, which further complicates its behaviour as a parasite. The losses caused by R. solani are very important and need a sustainable management strategy. The patchy appearance of the disease caused by this pathogen is well-known. The patches show within and between season dynamics. The factors which affect the spread of the disease can be grouped into three main categories: host plant, pathogen and environment. Ho…

POPULATION DYNAMICS OF SOIL-BORNE PLANTPATHOGENSbiologyEcologyHost (biology)PRIMARY INFECTIONSecondary infectionSPACIAL DYNAMICSDISEASE SUPPRESSIONBiological pest controlfood and beveragesSoil ScienceParasitism[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studybiology.organism_classificationMicrobiologyPREDICTABILITYSECONDARY INFECTIONRhizoctonia solaniTEMPORAL DYNAMICSEPIDEMIOLOGYHost plantsNatural enemiesPathogenBIOLOGICAL CONTROLSoil Biology and Biochemistry
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The Global Soil Mycobiome consortium dataset for boosting fungal diversity research

2021

This version of the article has been accepted for publication, after peer review and is subject to Springer Nature’s AM terms of use, but is not the Version of Record and does not reflect post-acceptance improvements, or any corrections. The Version of Record is available online at https://doi.org/10.1007/s13225-021-00493-7. Fungi are highly important biotic components of terrestrial ecosystems, but we still have a very limited understanding about their diversity and distribution. This data article releases a global soil fungal dataset of the Global Soil Mycobiome consortium (GSMc) to boost further research in fungal diversity, biogeography and macroecology. The dataset comprises 722,682 fu…

PacBio sequencingFungal richnessBiotic componentEcologyEcologyBiogeographyBiodiversityGlobal datasetPlant Ecology and Nature ConservationEdaphicSoil fungiBiologyFungal richnePhylogenetic diversityMicrobial ecologyMycologySettore BIO/03 - Botanica Ambientale E ApplicataPlantenecologie en NatuurbeheerBiologieEcology Evolution Behavior and SystematicsMacroecologyFungal Diversity
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Pyrolysis-GC-MS and CuO-oxidation-HPLC in the characterization of HMMs from sediments and surface waters downstream of a pulp mill

1998

Abstract High molecular mass fractions of lignin and humic compounds in sediments and waters downstream of a pulp mill were characterized applying pyrolysis-gas chromatography-mass spectrometry. The results were compared to those obtained using reversed phase HPLC on the cupric oxide oxidation products. The chromatographic data of both pyrolysis and cupric oxide oxidation were also subjected to the principal component analysis (PCA). The sediment samples and fractions obtained by ultrafiltration of river water samples were freeze dried prior to characterization. The sediment samples were also extracted using 2 M sodium hydroxide solution. The extracts were ultrafiltrated, freeze dried and c…

PaperEnvironmental EngineeringHealth Toxicology and MutagenesisUltrafiltrationFresh WaterHigh-performance liquid chromatographyGas Chromatography-Mass SpectrometryGel permeation chromatographychemistry.chemical_compoundSoil PollutantsEnvironmental ChemistryHumic acidOrganic ChemicalsFuransChromatography High Pressure LiquidFinlandchemistry.chemical_classificationChromatographyExtraction (chemistry)Public Health Environmental and Occupational HealthGeneral MedicineGeneral ChemistryReversed-phase chromatographyPollutionMolecular WeightchemistrySodium hydroxideGas chromatographyCopperWater Pollutants ChemicalChemosphere
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Vertical distribution of AhR-activating compounds in sediments contaminated by modernized pulp and paper industry

2013

Increased ethoxyresorufin-O-deethylase (EROD) activity is a sensitive biomarker of exposure to the chemicals which activate the aryl hydrocarbon receptor (AhR) and induce the cytochrome P450 system, such as many polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs) and polychlorinated biphenyls (PCBs). Pulp bleaching was one of the main sources of PCDDs and PCDFs until elemental chlorine free (ECF) and total chlorine free bleaching processes since 1990s have remarkably decreased but not completely eliminate discharges of these chemicals. In addition, historically contaminated sediments may act as a source of these persistent contaminants. In this study, the contam…

PaperGeologic SedimentsEnvironmental EngineeringPolychlorinated Dibenzodioxinsta1172Elemental chlorine freeIndustrial Wastechemistry.chemical_compoundLimit of DetectionCytochrome P-450 CYP1A1AnimalsSoil PollutantsWaste Management and DisposalFinlandWater Science and TechnologyCivil and Structural EngineeringBenzofuransReteneGeographyEcological Modelingfood and beveragesPolychlorinated biphenylSedimentContaminationDibenzofurans PolychlorinatedPulp and paper industryPollutionPolychlorinated BiphenylsKraft processchemistryLiverReceptors Aryl HydrocarbonCesium RadioisotopesEnvironmental chemistryOncorhynchus mykissSewage treatmentPolychlorinated dibenzofuransWater Research
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Halloysite nanotubes as sustainable nanofiller for paper consolidation and protection

2014

We investigated the filling process of cellulose-based paper with natural clay nanotubes and their mixtures with hydroxypropyl cellulose (HPC) that is commonly used as glue and consolidant for degraded paper. A comprehensive characterization of the materials was carried out through morphology, wettability, thermal degradation, and tensile properties. The treatment with halloysite nanotubes generated a decrease of the paper mechanical performance and did not alter the thermal properties. The co-presence of HPC and nanoparticles generated a more uniform nanotubes distribution in the paper fibrous structure and a significant enhancement of both the mechanical properties and the surface hydroph…

PaperNanotubeMaterials scienceConsolidation (soil)Hydroxypropyl celluloseTG; DMA; Halloysite; Paper;NanoparticleHalloysiteCondensed Matter PhysicDMAengineering.materialCondensed Matter PhysicsHalloysitechemistry.chemical_compoundchemistryUltimate tensile strengthengineeringTGWettingPhysical and Theoretical ChemistryCelluloseComposite materialSettore CHIM/02 - Chimica FisicaJournal of Thermal Analysis and Calorimetry
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Microbial community structure in soils with decomposing residues from plants with genetic modifications to lignin biosynthesis

2006

Lignin is a major determinant of the decomposition of plant materials in soils. Advances in transgenic technology have led to the possibility of modifying lignin to improve the pulping properties of plant materials for papermaking. Previous studies have shown that lignin modifications also affect the rate of plant material decay in soil. The aim of this work was to investigate short-term changes in soil microbial community structures when tobacco residues with reduced activity of enzymes in the monolignol pathway decompose. The residues from lignin-modified plants all decomposed faster than unmodified plant materials. The relative proportions of some of the structural groups of microbial ph…

PaperNitrogenAlcohol oxidoreductaseLignincomplex mixturesMicrobiologysoilchemistry.chemical_compoundTobaccoBotanyGeneticsgenetic modificationLigninMolecular BiologySoil MicrobiologydecompositionBacteriaPlant StemsbiologyfungiFungifood and beveragesMethyltransferasesPlants Genetically Modifiedbiology.organism_classificationDecompositionCarbonAlcohol Oxidoreductases[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMicrobial population biologychemistrymicrobial community structureSoil waterMonolignolSoil microbiologyBacteriaFEMS Microbiology Letters
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Fitting particle size distribution models to data from Burundian soils for the BEST procedure and other purposes

2009

Testing the Beerkan Estimation of Soil Transfer (BEST) soil particle size distribution (PSD) model is necessary to evaluate the applicability of the BEST procedure for characterising soil hydraulics. In this investigation, the fitting performance of the BEST PSD model was tested using a database of 114 Burundian soils with 14 measured particle size fractions for each soil sample, and also by considering a reduced number of measured particle size fractions for a sample. The fitting performance of the model developed by Fredlund et al. (2000) (FR model) was also considered for comparative purposes. On average, the BEST model yielded satisfactory results (i.e., mean relative error, E r ¯ = 3.9…

Particle-size distributionSoil textureBurundiSimulation modelingSoil ScienceDistribution (mathematics)Soil hydraulic propertieControl and Systems EngineeringApproximation errorParticle-size distribution modelSoil classificationStatisticsSoil waterParticle-size distributionSettore AGR/08 - Idraulica Agraria E Sistemazioni Idraulico-ForestaliSize fractionsParticle sizeAgronomy and Crop ScienceFood ScienceMathematicsBiosystems Engineering
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Effect of catchment characteristics on aquatic carbon export from a boreal catchment and its importance in regional carbon cycling

2013

Inland waters transport and emit into the atmosphere large amounts of carbon (C), which originates from terrestrial ecosystems. The effect of land cover and land-use practises on C export from terrestrial ecosystems to inland waters is not fully understood, especially in heterogeneous landscapes under human influence. We sampled for dissolved C species in five tributaries with well-determined subcatchments (total size 174.5 km(2)), as well as in various points of two of the subcatchments draining to a boreal lake in southern Finland over a full year. Our aim was to find out how land cover and land-use affect C export from the catchments, as well as CH4 and CO2 concentrations of the streams,…

Peat010504 meteorology & atmospheric sciencesDitchDrainage basinSTREAMS010501 environmental sciences01 natural sciencesCarbon CycleCarbon cycleSoilRiversTributaryDissolved organic carbonEnvironmental ChemistryEcosystemFinland0105 earth and related environmental sciencesGeneral Environmental ScienceHydrologyAir PollutantsGlobal and Planetary Changegeographygeography.geographical_feature_categoryEcologyAgricultureCarbon Dioxide15. Life on landCarbon13. Climate actionEnvironmental scienceTerrestrial ecosystemSeasonsMethaneGlobal Change Biology
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Modelling the Impacts of Climate Change on Dissolved Organic Carbon

2009

Dissolved organic carbon (DOC) from peat soils has implications both for the ecology of receiving waters and for the quality and treatment costs of water used for human consumption. Fluxes of DOC from peat soils are also relevant in the context of the global carbon cycle. Chapter 12 in this volume has reviewed the evidence for the effects of different environmental factors on the decomposition of peat soils and the export of DOC, drawing on literature and long-term data acquired from a number of European sites. The conclusion from this and many other studies is that, although there may be other influences such as land management and recovery from acid deposition, climate factors are a major…

Peat010504 meteorology & atmospheric sciencesEcologyScienceLand managementClimate changeContext (language use)010501 environmental sciences15. Life on land01 natural sciencesCarbon cycleHydrology (agriculture)13. Climate actionEnvironmental protectionSoil waterDissolved organic carbonEnvironmental science0105 earth and related environmental sciences
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