Search results for "solution"

showing 10 items of 5638 documents

Molecular Signatures of Biogeochemical Transformations in Dissolved Organic Matter from Ten World Rivers

2016

Rivers carry large amounts of dissolved organic matter (DOM) to the oceans thereby connecting terrestrial and marine element cycles. Photo-degradation in conjunction with microbial turnover is considered a major pathway by which terrigenous DOM is decomposed. To reveal globally relevant patterns behind this process, we performed photo-degradation experiments and year-long bio-assays on DOM from ten of the largest world rivers that collectively account for more than one-third of the fresh water discharge to the global ocean. We furthermore tested the hypothesis that the terrigenous component in deep-sea DOM may be far higher than biomarker studies suggest, because of the selective photochemi…

bio-degradationEarth sciences and geologyligniinilignindissolved organic matterWorld riversblack carbonPlants (botany)ultra-high resolution mass spectrometryLife sciences biologyDissolved organic matter (DOM)lcsh:QEarth Scienceworld riversphoto-degradationlcsh:ScienceFrontiers in Earth Science
researchProduct

New Multidimensional Coordination Polymers with μ 2 ‐ and μ 3 ‐dcno Cyano Carbanion Ligand {dcno – = [(NC) 2 CC(O)O(CH 2 ) 2 OH] – }

2006

New polymeric materials [M(dcno)2(H2O)2] [M = FeII (1), CoII (2)] and [M(dcno)2] [M = CuII (3), MnII (4)] with dcno– =[(NC)2CC(O)O(CH2)2OH]– = 2,2-dicyano-1-(2-hydroxyethoxy)ethenolate anion have been synthesised and characterised by IR spectroscopy, X-ray crystallography and magnetic measurements. In compounds 1 and 2, each organic ligand acts in a bridging mode with its two nitrogen atoms bound to two different metal ions, while in compounds 3 and 4, each organic anion acts as a μ3-bridging ligand through its two nitrogen atoms and the oxygen atom of the OH group. Each metal ion has a pseudo-octahedral trans-MN4O2 environment with four nitrogen atoms from four different organic ligands an…

biology010405 organic chemistryChemistryLigandMetal ions in aqueous solutionInorganic chemistryInfrared spectroscopy010402 general chemistry01 natural sciences0104 chemical sciences3. Good healthIonInorganic ChemistryMetalCrystallographyvisual_artbiology.proteinvisual_art.visual_art_mediumMoleculeOrganic anionCarbanionEuropean Journal of Inorganic Chemistry
researchProduct

Homo- and Heterobinuclear Cu2+ and Zn2+ Complexes of Ditopic Aza Scorpiand Ligands as Superoxide Dismutase Mimics

2017

Two polytopic aza-scorpiand-like ligands, 6-[7-(diaminoethyl)-3,7-diazaheptyl]-3,6,9-triaza-1-(2,6-pyridina)cyclodecaphane (L1) and 6-[6′-[3,6,9-triaza-1-(2,6-pyridina)cyclodecaphan-6-yl]-3-azahexyl]-3,6,9-triaza-1-(2,6-pyridina)cyclodecaphane (L2), have been synthesized. The acid–base behavior and Cu2+, Zn2+, and Cu2+/Zn2+ mixed coordination have been analyzed by potentiometry, cyclic voltammetry, and UV–vis spectroscopy. The resolution of the crystal structures of [Cu2L2Cl2](ClO4)2·1.67H2O (1), [Cu2HL2Br2](ClO4)3·1.5H2O (2), and [CuZnL2Cl2](ClO4)2·1.64H2O (3) shows, in agreement with the solution data, the formation of homobinuclear Cu2+/Cu2+ and heterobinuclear Cu2+/Zn2+ complexes. The m…

biology010405 organic chemistryChemistryLigandStereochemistryMetal ions in aqueous solutionCrystal structure010402 general chemistry01 natural sciences0104 chemical sciencesInorganic ChemistrySuperoxide dismutaseCrystallographybiology.proteinPhysical and Theoretical ChemistryCyclic voltammetrySpectroscopyStoichiometryInorganic Chemistry
researchProduct

Preorganization and reorganization as related factors in enzyme catalysis: the chorismate mutase case.

2003

In this paper a deeper insight into the chorismate-to prephenate-rearrangement, catalyzed by Bacillus subtilis chorismate mutase, is provided by means of a combination of statistical quantum mechanics/molecular mechanics simulation methods and hybrid potential energy surface exploration techniques. The main aim of this work is to present an estimation of the preorganization and reorganization terms of the enzyme catalytic rate enhancement. To analyze the first of these, we have studied different conformational equilibria of chorismate in aqueous solution and in the enzyme active site. Our conclusion is that chorismate mutase preferentially binds the reactive conformer of the substrate--that…

biologyChemical PhenomenaChemistryStereochemistryChemistry PhysicalProtein ConformationOrganic ChemistryActive siteSubstrate (chemistry)General ChemistryEnzyme structureCatalysisEnzyme catalysisSolutionsMolecular dynamicsComputational chemistryPotential energy surfacebiology.proteinChorismate mutaseElectrochemistryConformational isomerismBacillus subtilisChorismate MutaseChemistry (Weinheim an der Bergstrasse, Germany)
researchProduct

Letter to the Editor: Solution structure of hypothetical protein TA1414 from Thermoplasma acidophilum

2004

biologyChemistryHypothetical proteinStructural proteomicsThermoplasma acidophilumComputational biologybiology.organism_classificationBiochemistrySolution structureSpectroscopyStructural genomicsJournal of Biomolecular NMR
researchProduct

Dicarbonylchloro(pentabenzylcyclopentadienyl)ruthenium as Racemization Catalyst in the Dynamic Kinetic Resolution of Secondary Alcohols

2009

Dicarbonylchloro(pentabenzylcyclopentadienyl)ruthenium has been prepared and its structure confirmed by X-ray analysis. This complex shows excellent catalytic activity and modest stability against air in racemization reactions of secondary alcohols. In Candida antarctica lipase B (CAL-B) catalyzed dynamic kinetic resolution (DKR) of 1-phenyl- and 1-(furan-2-yl)ethanol compounds, the new complex shows improved performance as an alcohol racemization catalyst in comparison with its well-known pentaphenylcyclopentadienyl analogue, hitherto considered as the leading catalyst candidate. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2009)

biologyChemistryOrganic Chemistrychemistry.chemical_elementAlcoholbiology.organism_classificationEnzyme catalysisRutheniumCatalysisKinetic resolutionchemistry.chemical_compoundTransition metalOrganic chemistryCandida antarcticaPhysical and Theoretical ChemistryRacemizationEuropean Journal of Organic Chemistry
researchProduct

Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15 Å resolution by electron cryomicroscopy and angular reconstitution † 1 †This article is de…

1997

Abstract A three-dimensional reconstruction of keyhole limpet hemocyanin type 1 (KLH1) has been obtained using electron cryomicroscopy at liquid helium temperatures and single particle image processing. The use of a high-contrast embedding medium, 1% (w/v) glucose and 2% (w/v) ammonium molybdate (pH 7.0), enables high-resolution electron micrographs to be recorded close to focus, i.e. with excellent transfer of high-resolution information, while maintaining enough image contrast to localise the individual macromolecules in the images. When low-pass filtered to ∼45 A resolution, the new 15 A resolution reconstruction is very similar to the earlier reconstructions of gastropodan hemocyanins o…

biologyCryo-electron microscopymedicine.medical_treatmentResolution (electron density)Single particle analysisHemocyaninMegathura crenulatabiology.organism_classificationSymmetry (physics)CrystallographyStructural Biologybiology.proteinmedicineMolecular BiologyKeyhole limpet hemocyaninMacromoleculeJournal of Molecular Biology
researchProduct

Low temperature optical spectroscopy of cobalt-substituted hemocyanin from Carcinus maenas

1993

In this work we report the optical absorption spectra of three cobalt-substituted derivatives of hemocyanin (He) from Carcinus maenas, in the temperature range 300–20 K. The derivatives studied are the mononuclear (Co2+)-He with a single cobalt ion in the “CuA” site, the binuclear (Co2+)2-He and the binuclear mixed metal (Co2+-Cu1+)-He. At low temperature three main bands are clearly resolved; the temperature dependence of their zeroth, first and second moments sheds light on the stereodynamic properties in the surroundings of the chromophore. Within the limits of the reported analysis, in the binuclear derivatives the motions coupled to the chromophore appear to be “essentially harmonic” i…

biologyLigandMetal ions in aqueous solutionBiophysicsAnalytical chemistryActive sitechemistry.chemical_elementGeneral MedicineChromophoreAtmospheric temperature rangeCrystallographychemistrybiology.proteinSpectroscopyRotational–vibrational couplingCobaltEuropean Biophysics Journal
researchProduct

A histological study of a femur of Plagiosuchus, a Middle Triassic temnospondyl amphibian from southern GEmany, using thin sections and micro-CT scan…

2013

AbstractThe histology of a femur of Plagiosuchus, a Middle Triassic temnospondyl amphibian, is described on the basis of two supplementary methods: classic thin sectioning and micro-CT scanning. In addition, the effectiveness of high-resolution micro-CT scanning for histological analysis is assessed. A classic, mid-shaft thin section of the femur was prepared, but prior to slicing two micro-CT scans were made. One of these has an image stack of a total of 1,024 images in the horizontal plane and a slice thickness of 87.8 μm, so that the entire bone could be captured, while the second was at mid-shaft region only, yet with a higher resolution of 28.3 μm and an image stack of 787 images in th…

biologyMedullary cavityThin sectionResolution (electron density)TemnospondyliGeologyAnatomybiology.organism_classificationHorizontal planemedicine.anatomical_structureCortex (anatomy)medicineSkeletochronologyFemurGeologyNetherlands Journal of Geosciences-Geologie En Mijnbouw
researchProduct

Retrieving and broadcasting near-real-time biophysical parameters from MODIS and SEVIRI receiving stations at the global change unit of the Universit…

2015

We present here the automatic processing chains implemented at the Global Change Unit of the University of Valencia. These allow for a near-real-time retrieval of various biophysical parameters from both Sun-synchronous TERRA/AQUA Moderate Resolution Imaging Spectroradiometer MODIS and geostationary Meteosat Second Generation Spinning Enhanced Visible and Infrared Imager MSG SEVIRI sensors. Retrieved parameters, namely sea and land surface temperatures SST and LST, respectively, normalized difference vegetation index NDVI, and vegetation condition index VCI, are similar for both sensors, and specific approaches have been developed and implemented for near-real-time parameter retrievals: htt…

biologyMeteorologybusiness.industryGlobal changeAutomatic processingVegetationBroadcastingbiology.organism_classificationNormalized Difference Vegetation IndexGeostationary orbitGeneral Earth and Planetary SciencesEnvironmental scienceModerate-resolution imaging spectroradiometerbusinessValenciaRemote sensingInternational Journal of Remote Sensing
researchProduct