Search results for "structural"
showing 10 items of 5047 documents
The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest
2020
Background: Although native to North America, the invasion of the aphid-like grape phylloxera Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the past 150 years, viticulture relied on grafting-resistant North American Vitis species as rootstocks, thereby limiting genetic stocks tolerant to other stressors such as pathogens and climate change. Limited understanding of the insect genetics resulted in successive outbreaks across the globe when rootstocks failed. Here we report the 294-Mb genome of D. vitifoliae as a basic tool to understand host plant manipulation, nutritional endosymbiosis, and enhance global viticulture. Results: Using a combination of…
Warmer temperatures reduce the influence of an important keystone predator
2017
Predator–prey interactions may be strongly influenced by temperature variations in marine ecosystems. Consequently, climate change may alter the importance of predators with repercussions for ecosystem functioning and structure. In North-eastern Pacific kelp forests, the starfish Pycnopodia helianthoides is known to be an important predator of the purple sea urchin Strongylocentrotus purpuratus. Here we investigated the influence of water temperature on this predator–prey interaction by: (i) assessing the spatial distribution and temporal dynamics of both species across a temperature gradient in the northern Channel Islands, California, and (ii) investigating how the feeding rate of P. heli…
SHAPE MATTERS: EFFECT OF POINT MUTATIONS ON RNA SECONDARY STRUCTURE
2013
A suitable model to dive into the properties of genotype-phenotype landscapes is the relationship between RNA sequences and their corresponding minimum free energy secondary structures. Relevant issues related to molecular evolvability and robustness to mutations have been studied in this framework. Here, we analyze the one-mutant neighborhood of the predicted secondary structure of 46 different RNAs, including tRNAs, viroids, larger molecules such as Hepatitis-δ virus, and several random sequences. The probability distribution of the effect of point mutations in linear structural motifs of the secondary structure is well fit by Pareto or Lognormal probability distributions functions, indep…
New Hettangian tracks from the Causses Basin (Lozère, southern France) complement the poor fossil record of earliest Jurassic crocodylomorphs in Euro…
2017
International audience; A new vertebrate ichnological assemblage is described from the Hettangian Dolomitic Formation of the Causses Basin, at Le Serre (Lozère, southern France). We report tracks that complement the poor fossil record of lowermost Jurassic crocodylomorphs in Europe. Tetradactyl pes and pentadactyl manus imprints form a unique trackway. Traces are ascribed to Batrachopus isp. and they represent the third occurrence of this ichnogenus in European Hettangian geological formations. This is the first report of Batrachopus in Hettangian deposits of the Causses Basin. The tracks share some similarities with Batrachopus deweyi previously described from the Sinemurian of the Causses…
Innovative On-Site Adapted System for Fish Migration with Flow Divider and Glass Collector Basin
2020
Abstract The authors designed a new site-adapted fish passage system for upstream and downstream migration of small and large fish on the urban sector of the Bistriţa River. The longitudinal connectivity of this lotic system is interrupted by numerous transversal hydrotechnical works (weirs). This proposed system was designed to facilitate fish migration, promote fish recolonization of upstream and downstream habitats, allow the expansion of fish range, and increase spawning potential. All components of the proposed system are attached to a concrete girder located to the right stream bank, except a glass basin that is submerged in the riverbed. The positioning of the system in this girder e…
Tobacco cells contain a protein, immunologically related to the neutrophil small G protein Rac2 and involved in elicitor-induced oxidative burst.
1997
Abstract Suspension-cultured cells of Nicotiana tabacum generated active oxygen species (AOS) when they were treated with the proteinaceous elicitor, cryptogein. This response was blocked by diphenylene iodonium, an inhibitor of the neutrophil NADPH oxidase. When microsomal extracts of tobacco cells were probed with an antibody directed against the human small G protein Rac2, two immunoreactive proteins were detected at 18.5 and 20.5 kDa. The same experiment performed with cytosolic extracts of tobacco cells led to the observation of a strong immunoreactive protein at 21.5 kDa only in the cryptogein-treated cells. The appearance of this cytosolic protein was related to the production of AOS…
Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…
2020
Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…
Ecological function of phenolic compounds from mediterranean fucoid algae and seagrasses: An overview on the genus Cystoseira sensu lato and Posidoni…
2020
Biodiversity is undergoing rapid and worrying changes, partially driven by anthropogenic activities. Human impacts and climate change (e.g., increasing temperature and ocean acidification), which act at different spatial scales, represent the most serious threats to biodiversity and ecosystem structure and function. In the Mediterranean Sea, complex systems such as fucoid algae and seagrasses, characterized by a high associated biodiversity, are regularly exposed to natural and anthropogenic pressures. These systems, particularly sensitive to a variety of stressors, evolved several physiological and biochemical traits as a response to the different pressures which they are subjected to. For…
Deep divergence and evidence for translocations between Iranian and European populations of the alfalfa weevil (Coleoptera: Curculionidae) based on m…
2016
AbstractThe alfalfa weevil (Hypera postica(Gyllenhal): Coleoptera: Curculionidae) is an invasive pest of alfalfa (Medicago sativaLinnaeus; Fabaceae) in the Holarctic region. Across the wide geographic distribution of the species different local adaptions have been observed. Further, several distinct mitochondrial lineages have been discovered, which have been treated as western and Egyptian/eastern strains. However, our knowledge of the biogeography ofH. posticais largely limited to North American and Japanese populations. We sampled the species from four locations in Iran and two countries in Europe (Poland and Czech Republic) and sequenced the mitochondrial COI gene to detect patterns of …
Tracking marine alien macroalgae in the mediterranean sea: The contribution of citizen science and remote sensing
2021
The accelerating rate of the introduction of non-indigenous species (NIS) and the magnitude of shipping traffic make the Mediterranean Sea a hotspot of biological invasions. For the effective management of NIS, early detection and intensive monitoring over time and space are essential. Here, we present an overview of possible applications of citizen science and remote sensing in monitoring alien seaweeds in the Mediterranean Sea. Citizen science activities, involving the public (e.g., tourists, fishermen, divers) in the collection of data, have great potential for monitoring NIS. The innovative methodologies, based on remote sensing techniques coupled with in situ/laboratory advanced sampli…