Search results for "synthetic"

showing 10 items of 723 documents

Synthetic conversion of leaf chloroplasts into carotenoid-rich plastids reveals mechanistic basis of natural chromoplast development

2020

Plastids, the defining organelles of plant cells, undergo physiological and morphological changes to fulfill distinct biological functions. In particular, the differentiation of chloroplasts into chromoplasts results in an enhanced storage capacity for carotenoids with industrial and nutritional value such as beta-carotene (provitamin A). Here, we show that synthetically inducing a burst in the production of phytoene, the first committed intermediate of the carotenoid pathway, elicits an artificial chloroplast-to-chromoplast differentiation in leaves. Phytoene overproduction initially interferes with photosynthesis, acting as a metabolic threshold switch mechanism that weakens chloroplast i…

0106 biological sciences0301 basic medicineChloroplastsNuclear gene[SDV]Life Sciences [q-bio]ArabidopsisProtein EngineeringPhotosynthesis01 natural sciences03 medical and health scienceschemistry.chemical_compoundPhytoeneTobaccoChromoplast[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPlastidsPlastidCarotenoidComputingMilieux_MISCELLANEOUSPlant Proteinschemistry.chemical_classificationCarotenoidPhytoeneMultidisciplinarySyntheticfood and beveragesCell DifferentiationChromoplastBiological Sciencesbeta CarotenePlant cellCarotenoidsCell biology02.- Poner fin al hambre conseguir la seguridad alimentaria y una mejor nutrición y promover la agricultura sosteniblePlant LeavesChloroplastGENETICA030104 developmental biologychemistryDifferentiationChromoplat010606 plant biology & botanyProceedings of the National Academy of Sciences
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Covariation and phenotypic integration in chemical communication displays: biosynthetic constraints and eco-evolutionary implications

2018

Chemical communication is ubiquitous. The identification of conserved structural elements in visual and acoustic communication is well established, but comparable information on chemical communication displays (CCDs) is lacking. We assessed the phenotypic integration of CCDs in a meta‐analysis to characterize patterns of covariation in CCDs and identified functional or biosynthetically constrained modules. Poorly integrated plant CCDs (i.e. low covariation between scent compounds) support the notion that plants often utilize one or few key compounds to repel antagonists or to attract pollinators and enemies of herbivores. Animal CCDs (mostly insect pheromones) were usually more integrated t…

0106 biological sciences0301 basic medicineEco evolutionaryanalysisPhysiologyPlant ScienceAnimal Breeding and GenomicsBiologyfloral scentsChemical communicationFloral scentsphenotypic integration010603 evolutionary biology01 natural sciencesChemical communication03 medical and health sciencesPhenotypic integrationbiosynthetic constraintsFokkerij en Genomicavegetative scentsLaboratory of Entomologycorrelation networkEcologyOrganic Chemistrychemical communicationPhenotypic integrationInsect pheromonesPE&RCLaboratorium voor Entomologiecorrelation network analysisOrganische ChemieCorrelation network analysisBiosynthetic constraints030104 developmental biologyEvolutionary biologyinternationalFloral scentIdentification (biology)EPSVegetative scentsNew Phytologist
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Phosphoglycerate dehydrogenase genes differentially affect Arabidopsis metabolism and development.

2021

[EN] Unlike animals, plants possess diverse L-serine (Ser) biosynthetic pathways. One of them, the Phosphorylated Pathway of Serine Biosynthesis (PPSB) has been recently described as essential for embryo, pollen and root development, and required for ammonium and sulfur assimilation. The first and rate limiting step of PPSB is the reaction catalyzed by the enzyme phosphoglycerate dehydrogenase (PGDH). In Arabidopsis, the PGDH family consists of three genes, PGDH1, PGDH2 and PGDH3. PGDH1 is characterized as being the essential gene of the family. However, the biological significance of PGDH2 and PGDH3 remains unknown. In this manuscript, we have functionally characterized PGDH2 and PGDH3. Ph…

0106 biological sciences0301 basic medicineMutantArabidopsisPlant ScienceGenes Plant01 natural sciencesGene Expression Regulation EnzymologicSerine03 medical and health scienceschemistry.chemical_compoundSulfur assimilationBiosynthesisGene Expression Regulation PlantArabidopsisGeneticsSerinePhosphoglycerate dehydrogenaseGenePhosphoglycerate DehydrogenasePSPbiologyGeneral MedicinePhosphorylated pathway of serine biosynthesisbiology.organism_classificationBiosynthetic Pathways030104 developmental biologyPGDHBiochemistrychemistryEssential geneFISIOLOGIA VEGETALPhosphoserine phosphataseAgronomy and Crop Science010606 plant biology & botanyPlant science : an international journal of experimental plant biology
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The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism

2021

Abstract Because it is the precursor for various essential cellular components, the amino acid serine is indispensable for every living organism. In plants, serine is synthesized by two major pathways: photorespiration and the phosphorylated pathway of serine biosynthesis (PPSB). However, the importance of these pathways in providing serine for plant development is not fully understood. In this study, we examine the relative contributions of photorespiration and PPSB to providing serine for growth and metabolism in the C3 model plant Arabidopsis thaliana. Our analyses of cell proliferation and elongation reveal that PPSB-derived serine is indispensable for plant growth and its loss cannot b…

0106 biological sciences0301 basic medicineNitrogenPhysiologyNitrogen assimilationCell RespirationArabidopsisPlant DevelopmentPlant Science01 natural sciencesSerine03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsBiosynthesisGlutamine synthetaseSerineGeneticsPhosphorylationResearch ArticlesCell Proliferationchemistry.chemical_classificationbiologyChemistryMetabolismBiosynthetic PathwaysAmino acid030104 developmental biologyBiochemistrybiology.proteinPhotorespirationGlutamine oxoglutarate aminotransferase010606 plant biology & botanyPlant Physiology
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Photoprotection dynamics observed at leaf level from fast temporal reflectance changes

2018

Vegetation dynamically reacts to the available photosynthetically active radiation (PAR) by adjusting the photosynthetic apparatus to either a light harvesting or a photoprotective modus. When activating the photoprotection mechanism, either minor or major pigment-protein interactions may occur at the leaf level, resulting in different light absorption and consequently reflectance intensities. The reflectance changes were measured during sudden illumination transients designed to provoke fast adaptation to high irradiance. Different spectral reflectance change features were observed during different stages of photoprotection activation, extending over part of the visible spectral range (i.e…

0106 biological sciences0301 basic medicinePigmentsMaterials sciencePhotochemical Reflectance IndexPhotosynthesis01 natural sciencesFluorescenceReflectivity03 medical and health sciencesWavelength030104 developmental biologyPhotosynthetically active radiationPhotoprotectionVegetaciósense organsAbsorption (electromagnetic radiation)Biological system010606 plant biology & botany
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Boolean computation in plants using post-translational genetic control and a visual output signal

2018

[EN] Due to autotrophic growing capacity and extremely rich secondary metabolism, plants should be preferred targets of synthetic biology. However, developments in plants usually run below those in other taxonomic groups. In this work we engineered genetic circuits capable of logic YES, OR and AND Boolean computation in plant tissues with a visual output signal. The circuits, which are deployed by means of Agrobacterium tumefaciens, perform with the conditional activity of the MYB transcription factor Roseal from Antirrhinum majus inducing the accumulation of anthocyanins, plant endogenous pigments that are directly visible to the naked eye or accurately quantifiable by spectrophotometric a…

0106 biological sciences0301 basic medicineProteasesmedicine.medical_treatmentRecombinant Fusion ProteinsPotyvirusBiomedical EngineeringAgrobacterium01 natural sciencesBiochemistry Genetics and Molecular Biology (miscellaneous)Anthocyanins03 medical and health sciencesViral ProteinsAntirrhinum majusAnthocyanins Biological computingmedicineAntirrhinumMYBSecondary metabolismTranscription factorSynthetic biologyPlant ProteinsProteasebiologyfungiPotyvirusfood and beveragesGeneral MedicineAgrobacterium tumefaciensbiology.organism_classificationPlants Genetically ModifiedCell biologyGENETICA030104 developmental biologySpectrophotometryGenetic circuitsPotyvirus proteaseSynthetic BiologyProtein Processing Post-Translational010606 plant biology & botanyPeptide HydrolasesPlasmidsTranscription Factors
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UV-screening and springtime recovery of photosynthetic capacity in leaves of Vaccinium vitis-idaea above and below the snow pack

2019

International audience; Evergreen plants in boreal biomes undergo seasonal hardening and dehardening adjusting their photosynthetic capacity and photoprotection; acclimating to seasonal changes in temperature and irradiance. Leaf epidermal ultraviolet (UV)-screening by flavonols responds to solar radiation, perceived in part through increased ultraviolet-B (UV-B) radiation, and is a candidate trait to provide cross-photoprotection. At Hyytiälä Forestry Station, central Finland, we examined whether the accumulation of flavonols was higher in leaves of Vaccinium vitis-idaea L. growing above the snowpack compared with those below the snowpack. We found that leaves exposed to colder temperature…

0106 biological sciences0301 basic medicineTime FactorsPhotoinhibitionBOREALPhysiologyPlant ScienceForests01 natural sciencesPlant EpidermisAnthocyaninsSoilFlavonolsLOW-TEMPERATURESnowPhotosynthesis1183 Plant biology microbiology virologychemistry.chemical_classificationspring dehardening.CLIMATE-CHANGEbiologyChemistryTemperatureUnderstoreyHorticultureLIGHTSeasonsVacciniumUltraviolet RaysGrowing seasonPhotosynthesisDWARF SHRUB03 medical and health sciencesLEAFPHOTOSYSTEM-IIGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyVaccinium vitis-idaeaFlavonoidsSpring dehardeningPhotoprotectionSpectral qualityPhotosystem II Protein ComplexPigments Biological15. Life on landEvergreenbiology.organism_classificationPhotosynthetic capacitySUB-ARCTIC HEATHPlant Leaves030104 developmental biology13. Climate actionPhotoprotectionWINTERB RADIATIONArctic browning010606 plant biology & botany
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Fig virus-free production and survival rate improvement using meristem tip culture techinique associated with the encapsulation technology

2018

Three Mediterranean F. carica genotypes, i.e. cultivars Palazzo, Bifera nera and Catalanisca, initially infected by Fig leaf mottle-associated virus 1 (FLMaV-1), Fig leaf mottle-associated virus 2 (FLMaV-2), Fig mild mottling-associated virus (FMMaV), Fig mosaic virus (FMV), Fig latent virus 1 (FLV-1), Fig Badnavirus 1 (FBV-1) and Fig fleck-associated virus (FFkaV), were subjected to the sanitation technique via Meristem Tip (0.3-0.5 mm in size) Culture (MTC), also associated with the encapsulation technique (MTC-SS), in order to produce virus-free plant material. Encapsulation was tested to overcome the very low survival and regeneration rates, due to the small propagule size. Encouraging …

0106 biological sciencesChemistryfig mosaic disease synthetic seed sanitation RT-PCR.Settore AGR/12 - Patologia Vegetale04 agricultural and veterinary sciencesHorticultureMeristem01 natural sciencesEncapsulation (networking)Cell biologySettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree040103 agronomy & agriculture0401 agriculture forestry and fisheriesVirus freeSurvival rate010606 plant biology & botany
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A physiology-based Earth observation model indicates stagnation in the global gross primary production during recent decades

2020

Abstract Earth observation‐based estimates of global gross primary production (GPP) are essential for understanding the response of the terrestrial biosphere to climatic change and other anthropogenic forcing. In this study, we attempt an ecosystem‐level physiological approach of estimating GPP using an asymptotic light response function (LRF) between GPP and incoming photosynthetically active radiation (PAR) that better represents the response observed at high spatiotemporal resolutions than the conventional light use efficiency approach. Modelled GPP is thereafter constrained with meteorological and hydrological variables. The variability in field‐observed GPP, net primary productivity an…

0106 biological sciencesChinaEarth observation010504 meteorology & atmospheric sciencesEarth PlanetClimate ChangeIndiaClimate changeForcing (mathematics)Atmospheric sciences010603 evolutionary biology01 natural sciencesGIMMSEnvironmental ChemistryPrimary Research Articlelight use efficiencySouthern HemisphereEcosystemEarth system0105 earth and related environmental sciencesGeneral Environmental ScienceGlobal and Planetary ChangephotosynthesisEcologyBiospherePrimary productionTropicsland‐atmosphere interactions15. Life on landPrimary Research Articlesclimate change13. Climate actionPhotosynthetically active radiationEnvironmental scienceland-atmosphere interactionsvegetation productivity
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Chlorophyll fluorescence emission spectrum inside a leaf

2008

International audience; Chlorophyll a fluorescence can be used as an early stress indicator. Fluorescence is also connected to photosynthesis so it can be proposed for global monitoring of vegetation status from a satellite platform. Nevertheless, the correct interpretation of fluorescence requires accurate physical models. The spectral shape of the leaf fluorescence free of any re-absorption effect plays a key role in the models and is difficult to measure. We present a vegetation fluorescence emission spectrum free of re-absorption based on a combination of measurements and modelling. The suggested spectrum takes into account the photosystem I and II spectra and their relative contributio…

0106 biological sciencesChlorophyllChlorophyll aSpectral shape analysisI REACTION CENTERSSPINACH THYLAKOID MEMBRANES[SDU.ASTR.EP]Sciences of the Universe [physics]/Astrophysics [astro-ph]/Earth and Planetary Astrophysics [astro-ph.EP]PHOTOSYNTHETIC MEMBRANEPhotosystem I01 natural sciencesSpectral lineHIGHER-PLANTSPROTEIN COMPLEXES03 medical and health scienceschemistry.chemical_compoundmedicineEmission spectrumPhysical and Theoretical ChemistryChlorophyll fluorescenceLIGHT-HARVESTING COMPLEX030304 developmental biologyRemote sensing0303 health sciencesPhotosystem I Protein Complex[SDU.ASTR]Sciences of the Universe [physics]/Astrophysics [astro-ph]Photosystem II Protein Complexfood and beveragesFluorescencePlant LeavesSpectrometry FluorescenceROOM-TEMPERATUREchemistryPHOTOSYSTEM-I[SDU]Sciences of the Universe [physics]Espectroscòpia de fluorescènciaARABIDOPSIS-THALIANAmedicine.symptomVegetation (pathology)ENERGY-TRANSFER010606 plant biology & botany
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