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showing 10 items of 6745 documents

A recipe for postfledging survival in great tits Parus major: be large and be early (but not too much)

2016

Survival of juveniles during the postfledging period can be markedly low, which may have major consequences on avian population dynamics. Knowing which factors operating during the nesting phase affect postfledging survival is crucial to understand avian breeding strategies. We aimed to obtain a robust set of predictors of postfledging local survival using the great tit (Parus major) as a model species. We used mark–recapture models to analyze the effect of hatching date, temperatures experienced during the nestling period, fledging size and body mass on first-year postfledging survival probability of great tit juveniles. We used data from 5192 nestlings of first clutches ringed between 199…

0106 biological sciencesPopulationBreeding successZoologyBiology010603 evolutionary biology01 natural scienceslong‐term study010605 ornithologyLong-term studyFledging conditionSurvival probabilityHyperthermiaeducationEcology Evolution Behavior and SystematicsOriginal ResearchNature and Landscape ConservationParuseducation.field_of_studyEcologyHatchingEcologyFledgeCormack–Jolly–Seber modelsbiology.organism_classificationLong term learninginternational
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Crayfish invasion facilitates dispersal of plants and invertebrates by gulls

2018

The red swamp crayfish (Procambarus clarkii), originally from North America, is one of the world's worst aquatic invaders. It is a favoured prey item for waterbirds, but the influence of this novel predator–prey relationship on dispersal of other organisms has not previously been considered. We investigated the potential for dispersal of plants and invertebrates by migratory waterbirds feeding on alien P. clarkii in European ricefields at harvest time. In November–December of 2014–2015, we collected propagules from the outside of 13 crayfish captured as they moved out of ricefields during harvest in Doñana, south‐west Spain. We also collected excreta (N = 76 faeces, 14 pellets) of lesser‐bl…

0106 biological sciencesProcambarus clarkiibiology010604 marine biology & hydrobiologyZoologyIntroduced speciesBiológiai tudományokAquatic Sciencebiology.organism_classificationCrayfishProcambarus clarkii010603 evolutionary biology01 natural sciencesPredationEndozoochoryEpizoochoryHabitatPropaguleTermészettudományokSeedsBiological dispersalBiological invasionsInvertebrate
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The gypsy database (GyDB) of mobile genetic elements: release 2.0

2011

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…

0106 biological sciencesProtein domainretroelementsLineage (evolution)[SDV]Life Sciences [q-bio]Retroviridae ProteinsCaulimoviridaeEukaryote evolutioncomputer.software_genrephylogeny01 natural sciencesDatabases GeneticRefSeqPhylogenyPriority journalbase de données0303 health sciencesRetrovirusPhylogenetic treeDatabaseSequence analysisdatabases geneticArticlesClassificationChemistryGenetic lineRetroelementsGenetic databaseComputer programBiologyArticleMobile genetic element03 medical and health sciencesLong terminal repeatWeb pagephylogénieVirus proteinGeneticsLife Science[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAccess to informationTransposon030304 developmental biologyretroelements;phylogeny;software;terminal repeat sequences;databases geneticHidden Markov modelCauliflower mosaic virusCaulimovirussoftwareRetroposonTerminal Repeat SequencesDNA structureInterspersed Repetitive Sequencesterminal repeat sequencesNonhumanRetroviridaeData analysis softwareGenetic variabilityMobile genetic elementscomputerLENGUAJES Y SISTEMAS INFORMATICOSSoftware010606 plant biology & botanyPhylogenetic nomenclaturePhylogenetic tree
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Next-generation biological control

2020

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…

0106 biological sciencesProteomicsH10 Pests of plantsInternationalityComputer science[SDV]Life Sciences [q-bio]Laboratory of VirologySequence assemblybiological controlmicrobiome01 natural sciencesGenome editinggeneticsNagoya ProtocolLaboratory of EntomologyCYTOPLASMIC INCOMPATIBILITY2. Zero hunger0303 health sciencesQUANTITATIVE TRAIT LOCICommercefood and beveragesCONTROL AGENTSPE&RCBiosystematiekNASONIA-VITRIPENNISGUT CONTENT-ANALYSIS[SDE]Environmental SciencesTraitinsect breedingAXYRIDIS COLEOPTERA-COCCINELLIDAEOriginal ArticleLaboratory of GeneticsLIFE-HISTORY TRAITSGeneral Agricultural and Biological SciencesGenomicsContext (language use)Computational biology[SDV.BID]Life Sciences [q-bio]/Biodiversityartificial selectionQuantitative trait locusAnimal Breeding and GenomicsLaboratorium voor Erfelijkheidsleer010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyLaboratorium voor Virologiemodelling03 medical and health sciencesgenomics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFokkerij en GenomicaPARASITOID WASPSelection (genetic algorithm)modelling.030304 developmental biologySEX DETERMINATIONOriginal ArticlesLaboratorium voor EntomologieWIASgenome assemblyBiosystematicsEPSartificial selection biological control genetics genome assembly genomics insect breeding microbiome modellingBiological Reviews
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The impact of ocean acidification and warming on the skeletal mechanical properties of the sea urchin Paracentrotus lividus from laboratory and field…

2015

AbstractIncreased atmospheric CO2 concentration is leading to changes in the carbonate chemistry and the temperature of the ocean. The impact of these processes on marine organisms will depend on their ability to cope with those changes, particularly the maintenance of calcium carbonate structures. Both a laboratory experiment (long-term exposure to decreased pH and increased temperature) and collections of individuals from natural environments characterized by low pH levels (individuals from intertidal pools and around a CO2 seep) were here coupled to comprehensively study the impact of near-future conditions of pH and temperature on the mechanical properties of the skeleton of the euechin…

0106 biological sciencesSea urchinIntertidal zone010501 environmental sciencesTest (biology)Aquatic ScienceOceanography01 natural sciencesParacentrotus lividuschemistry.chemical_compoundbiology.animalAquatic scienceCO2 seepSea urchinEcology Evolution Behavior and SystematicsSkeleton0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyLong-term exposureOcean acidificationOcean acidificationOcean acidification sea urchin Paracentrotus lividus mechanical properties nanoindentation skeleton CO2 vent intertidal pools long-term exposurebiology.organism_classificationEcology Evolution Behavior and SystematicOceanographychemistryCarbonateSeawaterIntertidal poolMechanical propertieParacentrotus lividu
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Thirty years unmanaged green roofs: Ecological research and design implications

2016

Abstract The variations in species composition and assemblage of unmanaged simple-intensive green roofs in Hannover, Germany, were investigated over a thirty year period, in order to assess the persistence of the initial seed mixture and to evaluate floristic changes. The roofs were greened in 1985 with soil-based turf rolls sown with a mixture of five grasses (Festuca rubra, Festuca ovina, Agrostis capillaris, Lolium perenne and Poa pratensis). Three sets of 120 phytosociological releves, sampled in 1987, 1999 and 2014, have been compared to assess: (1) nestedness vs spatial turnover, (2) functional diversity and (3) the importance of vegetation dynamics on green roof performance and desig…

0106 biological sciencesSeed dispersalGreen roofSettore AGR/13 - Chimica AgrariaSimple-intensive green roofs Temperate ecosystems Long term dynamics Plant functional traits Urban biodiversity Descriptors010501 environmental sciencesManagement Monitoring Policy and LawBiology010603 evolutionary biology01 natural sciences333: Bodenwirtschaft und RessourcenSimple-intensive green roofs Temperate ecosystems Long term dynamics Functional traits Urban biodiversity DescriptorsRuderal species577: Ökologie0105 earth and related environmental sciencesNature and Landscape ConservationEcologyEcologySpecies diversityPlant community15. Life on landbiology.organism_classificationUrban StudiesSettore BIO/03 - Botanica Ambientale E ApplicataNestednessFestuca ovinaFestuca rubra
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Alkaline phosphatase survey in pecorino siciliano PDO cheese

2021

The determination of alkaline phosphatase (ALP) in cheeses has become an official method for controlling cheeses with a protected designation of origin (PDO), all of which use raw milk. PDO cheeses, characterized by high craftsmanship, usually have an uneven quality. However, for these cheeses, it is necessary to establish ALP values so that they can be defined as a raw milk product. In this study, a dataset with Pecorino Siciliano PDO samples was analyzed to determine ALP both at the core and under the rind. The results showed that there was no significant difference between the different zones in Pecorino cheese. A second dataset of 100 pecorino cheese samples determined that ALP was only…

0106 biological sciencesSettore AGR/19 - Zootecnica SpecialeHealth (social science)PasteurizationPlant ScienceTP1-118501 natural sciencesHealth Professions (miscellaneous)Microbiologylaw.inventionlaw010608 biotechnologyraw milk determinationFood science040502 food scienceChemistryCommunicationChemical technologySignificant difference04 agricultural and veterinary sciencesRaw milkPDO Pecorino Siciliano cheeseAlkaline phosphatasealkaline phosphatase determination0405 other agricultural sciencesFood Science
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Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid-base and ion-regulatory abilities.

2013

To reduce the negative effect of climate change on Biodiversity, the use of geological CO2 sequestration has been proposed; however leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2, we investigated the acid-base and ion regulatory responses, as well as the density, of sea urchins living around CO2 vents at Vulcano, Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore, we show that even in cl…

0106 biological sciencesSettore BIO/07 - EcologiaGeological Phenomena010504 meteorology & atmospheric sciencesClimate ChangeSpecies distributionBiodiversityMarine lifeAquatic ScienceOceanography01 natural sciencesParacentrotus lividushowever leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2 we investigated the acid-base and ion regulatory responses as well as the density of sea urchins living around CO2 vents at Vulcano Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore we show that even in closely-related taxa divergent physiological capabilities underlie differences in taxa distribution around the CO2 vent. It is concluded that species distribution under the sort of elevated CO2 conditions occurring with leakages from geological storages and future ocean acidification scenarios may partly be determined by quite subtle physiological differentiation.Mediterranean seaBenthosAnimalsSeawater14. Life underwaterEcosystem0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyTo reduce the negative effect of climate change on Biodiversity the use of geological CO2 sequestration has been proposedOcean acidificationCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationAdaptation PhysiologicalPollutionTransplantationOceanographyItaly13. Climate actionSea UrchinsWater Pollutants Chemical
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Effects of starvation on survival, cannibalism, body mass, and intestinal protozoan profile in the subterranean termite Reticulitermes lucifugus

2019

Scarcity or inadequate nutrition can affect biological and behavioural aspects of subterranean termites and their intestinal protozoan profile. The aim of this study was to investigate changes in survival, cannibalism, body mass, and protist community structure of Reticulitermes lucifugus Rossi subspecies “Sicily” following starvation to provide basic knowledge for the development of more specific studies on a possible survival strategy under stressful conditions. In nature, this termite consumes many food sources and its feeding activity is continuous during the year. In a 35-day laboratory experiment, groups of 50 termites (worker/soldier ratio 49:1) were subjected to two diets, starvatio…

0106 biological sciencesStarvationSocial insectProtistInadequate nutritionCannibalismBehaviour changeZoologySurvivorshipBiologyIntestinal protozoan010603 evolutionary biology01 natural sciences010602 entomologySettore AGR/11 - Entomologia Generale E ApplicataBasic knowledgeInsect ScienceSurvivorship curveSurvival strategymedicineReticulitermes lucifugusmedicine.symptomLaboratory experimentEcology Evolution Behavior and SystematicsInsectes Sociaux
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Dynamic complexities in host-parasitoid interaction

1999

In the 1970s ecological research detected chaos and other forms of complex dynamics in simple population dynamics models, initiating a new research tradition in ecology. However, the investigations of complex population dynamics have mainly concentrated on single populations and not on higher dimensional ecological systems. Here we report a detailed study of the complicated dynamics occurring in a basic discrete-time model of host-parasitoid interaction. The complexities include (a) non-unique dynamics, meaning that several attractors coexist, (b) basins of attraction (defined as the set of the initial conditions leading to a certain type of an attractor) with fractal properties (pattern of…

0106 biological sciencesStatistics and ProbabilityEcology (disciplines)PopulationChaoticBiologyBifurcation diagram010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biologylaw.invention03 medical and health sciencesFractalControl theorylawIntermittencyAttractorQuantitative Biology::Populations and EvolutionStatistical physicseducation030304 developmental biology0303 health scienceseducation.field_of_studyGeneral Immunology and MicrobiologyApplied MathematicsGeneral MedicineComplex dynamicsModeling and SimulationGeneral Agricultural and Biological SciencesJournal of theoretical biology
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