Search results for "two-dimensional"

showing 10 items of 350 documents

A Two-Dimensional Approach to Rubber V-Belt Mechanics

2010

A new two-dimensional approach to the mechanics of rubber V-belt CVT's takes into account the change, along the belt sides, of the sliding velocity on the pulley walls, together with the cross section rotation due to the shear forces. The results show significant differences with the one-dimensional thin belt model and point out the gradual increase or decrease of the belt curvature in the entrance and exit regions of the contact arc, which implies the negligibility of the belt arching in the free spans. Some experimental tests on the global variables of a rubber belt CVT indicate a very fine acceptability of the theoretical model.

Settore ING-IND/13 - Meccanica Applicata Alle MacchineV-belt two-dimensional approach
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Isolation and characterization of two T-box genes from sponges, the phylogenetically oldest metazoan taxon

2003

It is now well established that all metazoan phyla derived from one common ancestor, the hypothetical Urmetazoa. Due to the basal position of Porifera (Demospongiae) in the phylogenetic tree of Metazoa, studies on the mechanisms controlling the development of these animals can provide clues on the understanding of the origin of multicellular animals and on how the first organization of the body plan evolved. In this report we describe the isolation and genomic characterization of two T-box genes from the siliceous sponge Suberites domuncula. The phylogenetic analysis classifies one into the subfamily of Brachyury, Sd-Bra, and the second into the Tbx2 subfamily, Sd-Tbx2. Analyses of the Sd-B…

Siliceous spongeBrachyuryDNA ComplementarySubfamilyMolecular Sequence DataMolecular evolutionPhylogeneticsGeneticsAnimalsProtein IsoformsElectrophoresis Gel Two-DimensionalAmino Acid SequencePhylogenyBase SequencebiologyPhylogenetic treeSequence Analysis DNAAnatomybiology.organism_classificationPoriferaSuberites domunculaAlternative SplicingBody planEvolutionary biologyT-Box Domain ProteinsProtein Processing Post-TranslationalDevelopmental BiologyDevelopment Genes and Evolution
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A topology-constrained distance network algorithm for protein structure determination from NOESY data.

2005

This article formulates the multidi- mensional nuclear Overhauser effect spectroscopy (NOESY) interpretation problem using graph theory and presents a novel, bottom-up, topology-con- strained distance network analysis algorithm for NOESY cross peak interpretation using assigned resonances. AutoStructure is a software suite that implements this topology-constrained distance net- work analysis algorithm and iteratively generates structures using the three-dimensional (3D) protein structure calculation programs XPLOR/CNS or DY- ANA. The minimum input for AutoStructure in- cludes the amino acid sequence, a list of resonance assignments, and lists of 2D, 3D, and/or 4D-NOESY cross peaks. AutoStru…

Software suiteMagnetic Resonance SpectroscopybiologyProtein ConformationProteinsReproducibility of ResultsGraph theoryNuclear Overhauser effectCyanaModels TheoreticalNet (mathematics)biology.organism_classificationCrystallography X-RayBiochemistryProtein Structure SecondaryInterpretation (model theory)CrystallographyProtein structureStructural BiologyImage Processing Computer-AssistedMolecular BiologyTwo-dimensional nuclear magnetic resonance spectroscopyAlgorithmAlgorithmsMathematicsProteins
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ChemInform Abstract: Electron-Correlated Approaches for the Calculation of NMR Chemical Shifts

2010

Solid-state nuclear magnetic resonanceChemistryChemical shiftAnalytical chemistryGeneral MedicineFluorine-19 NMRNuclear magnetic resonance spectroscopyNuclear magnetic resonance crystallographyCarbon-13 NMRTwo-dimensional nuclear magnetic resonance spectroscopyEarth's field NMRChemInform
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2-D differential membrane proteome analysis of scarce protein samples

2006

Proteome studies with small sample amounts are difficult to perform, especially when membrane proteins are the focus of interest. In our study a new method for the analysis of scarce membrane protein samples combining large gel 2-D-CTAB/SDS-PAGE with fluorescence dye saturation labelling (satDIGE) was developed, allowing a highly sensitive differential analysis of different cell states. After Triton X-114 phase partitioning, enriched membrane protein samples of T cells were labelled at cysteine residues using fluorescence dyes and separated by large gel 2D-CTAB/SDS-PAGE. For a differential analysis 3 mug protein was found to be sufficient to detect proteins in a widespread well-separated di…

Spectrometry Mass Electrospray IonizationChromatographyProteomeMolecular Sequence DataCellMembrane ProteinsBiologyProteomicsBiochemistryFluorescenceMicemedicine.anatomical_structureMembrane proteinLabellingProteomemedicineAnimalsHumansElectrophoresis Gel Two-DimensionalAmino Acid SequenceMolecular BiologyPeptide sequenceCells CulturedFluorescent DyesCysteinePROTEOMICS
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Triterpene Saponins from Cyclamen trocopteranthum

2010

Two new triterpene saponins ( 1- 2) together with three known saponins, deglucocyclamin I ( 3), cyclamin ( 4), and mirabilin ( 5), were isolated from the tubers of Cyclamen trocopteranthum. They were elucidated as 3 beta- O-{4- O-[3-hydroxyl-3-methylglutaryl]- beta-D-xylopyranosyl-(1 --> 2)- beta-D-glucopyranosyl-(1 --> 4)-[ beta-D-glucopyranosyl-(1 --> 2)]- alpha-L-arabinopyranosyl}-16 alpha-hydroxy-13 beta,28-epoxy-oleanan-30-al ( 1) and 3 beta- O-{4- O-[3-hydroxyl-3-methylglutaryl]- beta-D-xylopyranosyl-(1 --> 2)-[ beta-D-glucopyranosyl-(1 --> 6)]- beta-D-glucopyranosyl-(1 --> 4)-[ beta-D-glucopyranosyl-(1 --> 2)]- alpha-L-arabinopyranosyl}-16 alpha-hydroxy-20,30-lactone-olean-12-ene ( 2…

Spectrometry Mass Electrospray IonizationMagnetic Resonance SpectroscopyStereochemistryChemical structurePlant compositionPharmaceutical ScienceAnalytical ChemistryTerpeneTumor colonTriterpeneCell Line TumorDrug DiscoveryHumansCyclamenPharmacologychemistry.chemical_classificationbiologyChemistryOrganic ChemistryNuclear magnetic resonance spectroscopySaponinsbiology.organism_classificationTriterpenesComplementary and alternative medicineCarbohydrate SequenceMolecular MedicineCyclamenTwo-dimensional nuclear magnetic resonance spectroscopy
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Tryptophan promotes morphological and physiological differentiation in Streptomyces coelicolor.

2015

The molecular mechanisms regulating tryptophan biosynthesis in actinomycetes are poorly understood; similarly, the possible roles of tryptophan in the differentiation program of microorganism life-cycle are still underexplored. To unveil the possible regulatory effect of this amino acid on gene expression, an integrated study based on quantitative teverse transcription-PCR (qRT-PCR) and proteomic approaches was performed on the actinomycete model Streptomyces coelicolor. Comparative analyses on the microorganism growth in a minimal medium with or without tryptophan supplementation showed that biosynthetic trp gene expression in S. coelicolor is not subjected to a negative regulation by the …

Spectrometry Mass Electrospray IonizationProteomeNitrogenStreptomyces coelicolorBiologySettore BIO/19 - Microbiologia GeneraleApplied Microbiology and BiotechnologyActinorhodinchemistry.chemical_compoundS. coelicolorGene clusterGene expressionElectrophoresis Gel Two-DimensionalGenechemistry.chemical_classificationSpores Bacterial2D-DIGE; Actinorhodin; CDA; Differentiation; S. coelicolor; TryptophanGene Expression ProfilingStreptomyces coelicolorTryptophanTryptophanGeneral MedicineGene Expression Regulation Bacterialbiology.organism_classificationCarbonAmino acidCulture MediaActinorhodinCDAchemistryBiochemistryDifferentiationProteomeMicroscopy Electron Scanning2D-DIGEEnergy MetabolismBiotechnologyChromatography LiquidApplied microbiology and biotechnology
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LC–ESI–FT–MSn Metabolite Profiling of Symphytum officinale L. Roots Leads to Isolation of Comfreyn A, an Unusual Arylnaphthalene Lignan

2020

Preparations of comfrey (Symphytum officinale L.) roots are used topically to reduce inflammation. Comfrey anti-inflammatory and analgesic properties have been proven in clinical studies. However, the bioactive compounds associated with these therapeutic activities are yet to be identified. An LC&ndash

Spectrometry Mass Electrospray Ionizationcomfrey rootsMetaboliteAnti-Inflammatory AgentsComfreySymphytum officinalePlant Roots01 natural sciencescomfreyn AArticleCatalysisUmbilical veinInorganic Chemistrylcsh:Chemistrychemistry.chemical_compoundLC–ESI–Orbitrap–MSComfreyHuman Umbilical Vein Endothelial CellsSymphytum officinaleHumans<i>Symphytum officinale</i>Physical and Theoretical ChemistryGloboidnan AMolecular Biologylcsh:QH301-705.5SpectroscopyLignanPlants MedicinalChromatographyMolecular StructurebiologyChemistry010401 analytical chemistryOrganic ChemistryComfrey roots; Comfreyn A; LC–ESI–Orbitrap–MS; Phenylpropanoids; Symphytum officinaleGeneral Medicinebiology.organism_classification0104 chemical sciencesComputer Science Applications010404 medicinal & biomolecular chemistrylcsh:Biology (General)lcsh:QD1-999Metabolite profilingTwo-dimensional nuclear magnetic resonance spectroscopyChromatography LiquidphenylpropanoidsInternational Journal of Molecular Sciences
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Nitration of cathepsin D enhances its proteolytic activity during mammary gland remodelling after lactation

2009

Proteomic studies in the mammary gland of control lactating and weaned rats have shown that there is an increased pattern of nitrated proteins during weaning when compared with controls. Here we report the novel finding that cathepsin D is nitrated during weaning. The expression and protein levels of this enzyme are increased after 8 h of litter removal and this up-regulation declines 5 days after weaning. However, there is a marked delay in cathepsin D activity since it does not increase until 2 days post-weaning and remains high thereafter. In order to find out whether nitration of cathepsin D regulates its activity, iNOS (inducible nitric oxide synthase)−/− mice were used. The expression…

Spectrometry Mass Electrospray Ionizationmedicine.medical_specialtyImmunoblottingNitric Oxide Synthase Type IICathepsin DWeaningCathepsin DBiochemistryChromatography AffinityMice03 medical and health scienceschemistry.chemical_compoundMammary Glands Animal0302 clinical medicinePregnancyTandem Mass SpectrometryInternal medicineLactationmedicineAnimalsImmunoprecipitationLactationWeaningElectrophoresis Gel Two-DimensionalMolecular BiologyMammary gland involution030304 developmental biology0303 health sciencesNitratesbiologyReverse Transcriptase Polymerase Chain ReactionNitrotyrosineLife SciencesCell BiologyEnzyme assayRats3. Good healthNitric oxide synthaseEndocrinologymedicine.anatomical_structurechemistry030220 oncology & carcinogenesisbiology.proteinFemalePeroxynitriteChromatography LiquidBiochemical Journal
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Concentriols B, C and D, three squalene-type triterpenoids from the ascomycete Daldinia concentrica

2002

Abstract Three squalene-type triterpenoids named concentricols B, C and D ( 1 – 3 ) were isolated from the ethyl acetate extract of fruiting bodies of the xylariaceous ascomycete Daldinia concentrica . Their absolute structures were elucidated by analysis of 2D NMR, MS, IR and UV spectra, and the modified Mosher's method.

SqualeneMagnetic Resonance SpectroscopyMolecular StructureStereochemistrySpectrum AnalysisEthyl acetatePlant ScienceGeneral MedicineHorticultureBiologybiology.organism_classificationBiochemistryTriterpenesSqualenechemistry.chemical_compoundTriterpenoidUv spectraAscomycotachemistryDaldinia concentricaOrganic chemistryMolecular BiologyTwo-dimensional nuclear magnetic resonance spectroscopyPhytochemistry
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