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RESEARCH PRODUCT
2-D differential membrane proteome analysis of scarce protein samples
Edgar SchmittGudrun LinsenmannKatrin MarcusBarbara SitekPetra LutterHelmut E. MeyerStefan MüllnerGabriele BeckerCornelia JoppichThomas SchulenborgThomas WiebringhausStephanie Felske‐müllerStefan Hellingsubject
Spectrometry Mass Electrospray IonizationChromatographyProteomeMolecular Sequence DataCellMembrane ProteinsBiologyProteomicsBiochemistryFluorescenceMicemedicine.anatomical_structureMembrane proteinLabellingProteomemedicineAnimalsHumansElectrophoresis Gel Two-DimensionalAmino Acid SequenceMolecular BiologyPeptide sequenceCells CulturedFluorescent DyesCysteinedescription
Proteome studies with small sample amounts are difficult to perform, especially when membrane proteins are the focus of interest. In our study a new method for the analysis of scarce membrane protein samples combining large gel 2-D-CTAB/SDS-PAGE with fluorescence dye saturation labelling (satDIGE) was developed, allowing a highly sensitive differential analysis of different cell states. After Triton X-114 phase partitioning, enriched membrane protein samples of T cells were labelled at cysteine residues using fluorescence dyes and separated by large gel 2D-CTAB/SDS-PAGE. For a differential analysis 3 mug protein was found to be sufficient to detect proteins in a widespread well-separated diagonal spot pattern.
| year | journal | country | edition | language |
|---|---|---|---|---|
| 2006-07-13 | PROTEOMICS |