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showing 10 items of 24801 documents

A QM/MM Approach Using the AMOEBA Polarizable Embedding: From Ground State Energies to Electronic Excitations

2016

International audience; A fully polarizable implementation of the hybrid Quantum Mechanics/Molecular Mechanics approach is presented, where the classical environment is described through the AMOEBA polarizable force field. A variational formalism, offering a self-consistent 1 relaxation of both the MM induced dipoles and the QM electronic density is used for ground state energies and extended to electronic excitations in the framework of Time-Dependent Density Functional Theory combined with a state specific response of the classical part. An application to the calculation of the solvatochromism of the pyridinium N-phenolate betaine dye used to define the solvent ET30 scale is presented. Th…

010304 chemical physicsChemistryPolarizable force fieldSolvatochromismQuantum Chemistry010402 general chemistryElementary chargeQM/MM01 natural sciences0104 chemical sciencesComputer Science Applications[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryQM/MMQM/MM; Polarisable embedding; Physical and Theoretical ChemistryPolarizabilityQuantum mechanics0103 physical sciencesPolarisable embeddingDensity functional theorypolarizable force field AMOEBAPhysical and Theoretical ChemistryGround stateExcitationElectronic densityJournal of Chemical Theory and Computation
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Unravelling the kinetics and molecular mechanism of the degenerate Cope rearrangement of bullvalene

2020

The kinetics and molecular mechanism of the gas phase degenerate Cope rearrangement (DCR) of bullvalene have been investigated by applying quantum mechanical calculations. Highly accurate energies (CBS-QB3 and CBS-APNO) and RRKM calculations were employed to study the kinetics and ‘fall-off’ behavior. It was found that the DCR of bullvalene (C3v) occurs through a bishomoaromatic transition structure (C2v) with an energy barrier of ∼49 kJ mol−1. The calculated activation energy and enthalpy were in good agreement with the available values in the literature, but lower than those of common Cope rearrangement; this result is related to the high stabilization energy due to the interaction of the…

010304 chemical physicsDegenerate energy levelsEnthalpyKineticsGeneral ChemistryActivation energy010402 general chemistry01 natural sciencesBullvaleneCatalysis0104 chemical sciencesHomolysisReaction ratechemistry.chemical_compoundchemistryChemical physics0103 physical sciencesMaterials ChemistryCope rearrangementNew Journal of Chemistry
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pKa at Quartz/Electrolyte Interfaces.

2016

Acidity of silanol sites at the crystalline quartz/aqueous electrolyte (NaCl, NaI, KCl) interfaces are calculated from ab initio molecular dynamics simulations. pKa’s are found to follow a combination of the cationic and anionic Hofmeister series in the order pKa(neat solution) < pKa(NaCl) < pKa(NaI) < pKa(KCl), in agreement with experimental measurements. Rationalization of this ranking is achieved in terms of the microscopic local solvation of the protonated silanols and their conjugated bases, the silanolates SiO–. The change in the pKa is the result of both water destructuring by alkali halides, as well as of the specific cation/SiO– interaction, depending on the electrolyte. M…

010304 chemical physicsHofmeister series[SDV]Life Sciences [q-bio]Inorganic chemistrySolvationCationic polymerizationHalideProtonation02 engineering and technologyElectrolyte021001 nanoscience & nanotechnologyAlkali metal01 natural sciencesSilanolchemistry.chemical_compoundchemistry0103 physical sciencesGeneral Materials Science[PHYS.PHYS.PHYS-CHEM-PH]Physics [physics]/Physics [physics]/Chemical Physics [physics.chem-ph]Physical and Theoretical Chemistry0210 nano-technologyThe journal of physical chemistry letters
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9,10-Phenanthrenedione as Visible-Light Photoredox Catalyst: A Green Methodology for the Functionalization of 3,4-Dihydro-1,4-Benzoxazin-2- Ones thro…

2018

A visible-light photoredox functionalization of 3,4-dihydro-1,4-benzoxazin-2-ones through a Friedel-Crafts reaction with indoles using an inexpensive organophotoredox catalyst is described. The reaction uses a dual catalytic system that is formed by a photocatalyst simple and cheap, 9,10-phenanthrenedione, and a Lewis acid, Zn(OTf)2. 5W white LEDs are used as visible-light source and oxygen from air as a terminal oxidant, obtaining the corresponding products with good yields. The reaction can be extended to other electron-rich arenes. Our methodology represents one of the most valuable and sustainable approach for the functionalization of 3,4-dihydro-1,4-benzoxazin-2-ones, as compared to th…

010402 general chemistrylcsh:Chemical technology01 natural sciencesCatalysisCatalysislcsh:Chemistrychemistry.chemical_compoundCatàlisiTryptophollcsh:TP1-1185Lewis acids and basesorganic_chemistryPhysical and Theoretical ChemistryFriedel-Crafts reactionFriedel–Crafts reaction010405 organic chemistryindolesCombinatorial chemistry0104 chemical scienceschemistrylcsh:QD1-999visible-light photocatalysis14-benzoxazin-2-onesPhotocatalysisSurface modificationorganophotoredox catalysisQuímica orgànicaDerivative (chemistry)Visible spectrum
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Elucidating the Influence of the Activation Energy on Reaction Rates by Simulations Based on a Simple Particle Model

2020

An application for visualizing the dynamic properties of an equimolar binary mixture of isotropic reactive particles is presented. By introducing a user selectable choice for the activation energy, the application is useful to demonstrate qualitatively that the reaction rate depends on the above choice and on temperature. The application is based on a 2D realistic dynamic model where atoms move because of their thermal energies and the trajectories are determined by solving numerically Newton’s laws according to a Molecular Dynamics (MD) scheme. Collisions are monitored as time progresses, and every time the collision energy is larger than the selected activation energy, a reactive event oc…

010405 organic chemistry05 social sciencesIsotropyKinetics050301 educationBinary numberGeneral ChemistryActivation energy01 natural sciences0104 chemical sciencesEducationReaction rateHigh School/Introductory Chemistry First-Year Undergraduate/General Physical Chemistry Chemoinformatics Computer-Based Learning Kinetics Kinetic-Molecular TheorySimple (abstract algebra)Chemical physicsMolecule0503 educationEnergy (signal processing)Settore CHIM/02 - Chimica Fisica
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A green and efficient method for the synthesis of homodimeric (β-dicarbonyl) arylmethanes and dihydropyridine from dimedone in water

2018

A direct method has been developed for the synthesis of the dihydropyridine ring system by means of Michael reaction. The reaction of dimedone with 1 .0 equiv. of amines in water provides intermediate product, which allowed dihydropyridine derivatives by intramolecular cyclization in various yields. Of particular interest is the use of the water as solvent of reaction and in absence of catalyst. Also these operating conditions protect the environment and economic points of view.Keywords: aqueous synthesis; bioactivity; dihydropyridine; dimedone; green method; selective conditions

010405 organic chemistryChemistryDihydropyridine010402 general chemistry01 natural sciencesaqueous synthesis; bioactivity; dihydropyridine; dimedone; green method; selective conditionsIntermediate product0104 chemical sciencesCatalysisSolventchemistry.chemical_compoundDimedoneIntramolecular forcemedicineMichael reactionOrganic chemistryDihydropyridine derivativesmedicine.drugJournal of Fundamental and Applied Sciences
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2020

The course of organic chemical reactions is efficiently modelled through the concepts of “electrophiles” and “nucleophiles” (meaning electron-seeking and nucleus-seeking reactive species). On the one hand, an advanced approach of the correlation of the nucleophilicity parameters N and electrophilicity E has been delivered from the linear free energy relationship log k (20 °C) = s(N + E). On the other hand, the general influence of the solvent mixtures, which are very often employed in preparative synthetic chemistry, has been poorly explored theoretically and experimentally, to date. Herein, we combined experimental and theoretical studies of the solvent influence on pyrrolidine nucleophili…

010405 organic chemistryChemistryGeneral Chemical EngineeringSolvationGeneral ChemistryFree-energy relationship010402 general chemistry01 natural sciencesPyrrolidine0104 chemical sciencesSolventchemistry.chemical_compoundComputational chemistryNucleophilic substitutionDensity functional theorySolvent effectsAcetonitrileRSC Advances
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Access to α-Aminophosphonic Acid Derivatives and Phosphonopeptides by [Rh(P–OP)]-Catalyzed Stereoselective Hydrogenation

2020

The hydrogenation of N-substituted vinylphosphonates using rhodium complexes derived from P–OP ligands L1, ent-L1, or (R,R)-Me-DuPHOS as catalysts has been successfully accomplished, achieving very high levels of stereoselectivity (up to 99% ee or de). The described synthetic strategy allowed for the efficient preparation of α-aminophosphonic acid derivatives and phosphonopeptides, which are valuable building blocks for the preparation of biologically relevant molecules.

010405 organic chemistryChemistryLigandOrganic Chemistrychemistry.chemical_element010402 general chemistry01 natural sciencesMedicinal chemistry0104 chemical sciencesCatalysisRhodiumDerivative (finance)MoleculeStereoselectivityJournal of Organic Chemistry
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Facile synthesis of annulated heterocyclic benzo[kl]acridine derivatives via one-pot N–H/C–H coupling

2016

An efficient N–H/C–H one-pot coupling method for the preparation of benzo[kl]acridines has been developed based on palladium-catalyzed domino synthesis. Using commercially available starting materials such as dihalonaphthalenes and diphenylamines, and combining amination with catalysts for C–H activation, up to 95% overall yield can be achieved.

010405 organic chemistryChemistryOrganic ChemistryAcridine derivatives010402 general chemistry01 natural sciencesMedicinal chemistryDomino0104 chemical sciencesCatalysisCoupling (electronics)Yield (chemistry)Organic chemistryAminationOrganic Chemistry Frontiers
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A Fully Conjugated TTF-π-TCAQ System: Synthesis, Structure, and Electronic Properties

2011

The synthesis of the first fully conjugated tetrathiafulvalene-tetracyano-p-quinodimethane ((TTF)-TCNQ)-type system has been carried out by means of a Julia-Kocienski olefination reaction. In particular, a tetracyanoanthraquinodimethane (TCAQ) formyl derivative and two new sulfonylmethyl-exTTFs (exTTF = 2-[9-(1,3-dithiol-2-ylidene)anthracen-10(9H)-ylidene]-1,3-dithiole)--prepared as new building blocks--were linked. A variety of experimental conditions reveal that the use of sodium hexamethyldisilazane (NaHMDS) as base in THF afforded the E olefins with excellent stereoselectivity. Theoretical calculations at the B3LYP/6-31G** level point to highly distorted exTTF and TCAQ that form an almo…

010405 organic chemistryChemistryOrganic ChemistryGeneral ChemistryConjugated system010402 general chemistryPhotochemistry01 natural sciencesAcceptorCatalysis0104 chemical sciencesIonchemistry.chemical_compoundRadical ionExcited stateGround stateDerivative (chemistry)TetrathiafulvaleneChemistry - A European Journal
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