Search results for "viral protein"

showing 10 items of 182 documents

Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens

2019

25 Páginas, 7 figuras, 2 tablas

RNA virusesRotavirusViral DiseasesPhysiologyViral Nonstructural ProteinsPathology and Laboratory MedicineCrystallography X-Raymedicine.disease_causeBiochemistryBinding AnalysisReovirusesImmune PhysiologyRotavirusMedicine and Health SciencesChemical PrecipitationBiology (General)Antigens ViralGastroenterologiachemistry.chemical_classification0303 health sciencesImmune System ProteinsCrystallographyMolecular StructurebiologyPhysics030302 biochemistry & molecular biologyChemical ReactionsRNA-Binding ProteinsCondensed Matter PhysicsLigand (biochemistry)Amino acidChemistryInfectious DiseasesMedical MicrobiologyViral PathogensVirusesPhysical SciencesCrystal StructurePathogensCrystallizationResearch ArticleChemical ElementsGlycanQH301-705.5Virus RNAViral proteinImmunologyResearch and Analysis MethodsMicrobiologyABO Blood-Group SystemCell Line03 medical and health sciencesAntigenVirologyGeneticsmedicineSolid State PhysicsHumansAntigensBinding siteMicrobial PathogensMolecular BiologyRotavirus InfectionChemical Characterization030304 developmental biologyChemical PhysicsBinding SitesBiology and life sciencesMutagenesisOrganismsProteinsRC581-607Molecular biologyCarbonchemistrybiology.proteinCapsid ProteinsParasitologyImmunologic diseases. AllergyPLOS Pathogens
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Exogenous introduction of an immunodominant peptide from the non-structural IE1 protein of human cytomegalovirus into the MHC class I presentation pa…

2008

Exogenous introduction of particle-associated proteins of human cytomegalovirus (HCMV) into the major histocompatibility complex (MHC) class I presentation pathway by subviral dense bodies (DB) is an effective way to sensitize cells against CD8 T-cell (CTL) recognition and killing. Consequently, these particles have been proposed as a platform for vaccine development. We have developed a strategy to refine the antigenic composition of DB. For proof of principle, an HCMV recombinant (RV-VM3) was generated that encoded the immunodominant CTL determinant IE1TMY from the IE1 protein in fusion with the major constituent of DB, the tegument protein pp65. To generate RV-VM3, a bacterial artificial…

Recombinant Fusion ProteinsvirusesCytomegalovirusImmunodominanceMajor histocompatibility complexImmediate-Early Proteinslaw.inventionViral ProteinsAntigenlawVirologyMHC class IHumansAntigen PresentationbiologyHistocompatibility Antigens Class IVirionvirus diseasesViral VaccinesGenetic TherapyFusion proteinVirologyPeptide FragmentsCTL*Cytomegalovirus Infectionsbiology.proteinRecombinant DNACD8T-Lymphocytes CytotoxicJournal of General Virology
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Improving baculovirus transduction of mammalian cells by surface display of a RGD-motif

2006

An RGD-containing peptide, comprising 23 amino acids from the foot-and-mouth disease virus (FMDV) VP1 protein was engineered into the envelope of Autographa californica nuclear polyhedrosis virus surface (AcNPV) using two different display strategies. The RGD-motif is a well-described tripeptide, that by binding to cell surface integrins facilitates virus entry into cells. This epitope was displayed, either by directly modifying the native major envelope protein gp64 of AcNPV, or by incorporating a second, modified version of gp64 onto the virus surface. Transduction efficiencies of four mammalian cell lines were compared by detecting the expression of the reporter gene green fluorescent pr…

Reporter genebiologyvirusesAmino Acid MotifsGenetic VectorsBioengineeringGeneral Medicinebiology.organism_classificationApplied Microbiology and BiotechnologyMolecular biologyRecombinant ProteinsVirusEpitopeGreen fluorescent proteinViral ProteinsTransduction (genetics)Autographa californicaTransduction GeneticViral entryAnimalsHumansBaculoviridaeOligopeptidesBiotechnologyRGD motifJournal of Biotechnology
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Full-genome sequencing of a Hungarian canine G3P[3] Rotavirus A strain reveals high genetic relatedness with a historic Italian human strain

2015

A canine Rotavirus A strain was identified in the fecal specimen of a young dog during 2012 in Hungary. The strain RVA/Dog-wt/HUN/135/2012/G3P[3] shared complete genotype constellation (G3-P[3]-I3-R3-C3-M3-A15-N2-T3-E3-H6) and high genome sequence similarity (nt, 98.8 %) with a historic human strain, RVA/Human-tc/ITA/PA260-97/1997/G3P[3]. This study provides evidence for the canine origin of the unusual NSP1 genotype, A15, and reinforces the hypothesis of direct interspecies transmission of canine rotaviruses to humans.

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaGenotype constellationMolecular Sequence DataGenome ViralBiologymedicine.disease_causeGenomeRotavirus InfectionsViral ProteinsDogsPhylogenetic analysiGeneticPhylogeneticsZoonosiSequence Homology Nucleic AcidRotavirusSemiconductor sequencingVirologyGenotypeGeneticsmedicineAnimalsHumansDog DiseasesMolecular BiologyPhylogenyGeneticsWhole genome sequencingHungaryNSP1Base SequenceStrain (biology)General MedicineIon semiconductor sequencingVirologyItaly
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Evolution of DS-1-like human G2P[4] rotaviruses assessed by complete genome analyses

2013

Group A rotaviruses (RVAs) are a leading cause of viral gastroenteritis in children, with G2P[4] RVA being one of the most common human strain worldwide. The complete genome sequences of nine G2P[4] RVA strains, selected from a 26-year archival collection (1985-2011) established in Palermo/Italy, were determined. A strain associated with a peak of G2P[4] RVA activity in 1996 resembled a reassortant strain identified in Kenya in 1982 and completely differed in the genomic make up from more recent strains that circulated during 2004-2011. Conversely, the 2004-2011 G2P[4] RVAs were genetically more similar to contemporary RVA strains circulating globally. Recent G2P[4] strains possessed either…

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaMolecular Sequence DataReassortmentSequence alignmentGenome ViralBiologymedicine.disease_causeGenomeRotavirus InfectionsEvolution MolecularViral ProteinsPhylogeneticsVirologyRotavirusGenotypemedicineHumansAmino Acid SequencePeptide sequencePhylogenyGeneticsRotavirus G2P[4] evolution ItalyStrain (biology)VirologyItalySequence AlignmentJournal of General Virology
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Functional roles of the membrane-associated AAV protein MAAP

2021

AbstractWith a limited coding capacity of 4.7 kb, adeno-associated virus (AAV) genome has evolved over-lapping genes to maximise the usage of its genome. An example is the recently found ORF in the cap gene, encoding membrane-associated accessory protein (MAAP), located in the same genomic region as the VP1/2 unique domain, but in a different reading frame. This 13 KDa protein, unique to the dependovirus genus, is not homologous to any known protein. Our studies confirm that MAAP translation initiates from the first CTG codon found in the VP1 ORF2. We have further observed MAAP localised in the plasma membrane, in the membranous structures in close proximity to the nucleus and to the nuclea…

SciencevirusesGenetic VectorsBiologyVirus ReplicationGenomeinfektiotArticleVirusViral Proteins03 medical and health scienceschemistry.chemical_compoundCapsidGene therapyPlasmidProtein sequencingHumansGeneparvovirukset030304 developmental biology0303 health sciencesMultidisciplinaryMolecular engineeringVirus Assembly030302 biochemistry & molecular biologyQVirionRMembrane ProteinsTranslation (biology)DependovirusCell biologyCapsidchemistryMedicineCapsid ProteinsproteiinitDNAPlasmidskapsidi
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Oral and Vaginal Epithelial Cell Lines Bind and Transfer Cell-Free Infectious HIV-1 to Permissive Cells but Are Not Productively Infected

2014

The majority of HIV-1 infections worldwide are acquired via mucosal surfaces. However, unlike the vaginal mucosa, the issue of whether the oral mucosa can act as a portal of entry for HIV-1 infection remains controversial. To address potential differences with regard to the fate of HIV-1 after exposure to oral and vaginal epithelium, we utilized two epithelial cell lines representative of buccal (TR146) and pharyngeal (FaDu) sites of the oral cavity and compared them with a cell line derived from vaginal epithelium (A431) in order to determine (i) HIV-1 receptor gene and protein expression, (ii) whether HIV-1 genome integration into epithelial cells occurs, (iii) whether productive viral in…

Sexual transmissionTranscription GeneticVirus IntegrationScienceReceptors Cell SurfaceGenome ViralBiologyMicrobiologyCXCR4EpitheliumVirusCell LineFlow cytometryViral ProteinsImmunodeficiency VirusesmedicineHumansRNA MessengerOral mucosaMicrobial PathogensMultidisciplinarymedicine.diagnostic_testQMouth MucosaRBiology and Life SciencesHIVCorrectionEpithelial CellsVirologyMolecular biologyEpitheliumBiological Tissuemedicine.anatomical_structureGene Expression RegulationTranscytosisMedical MicrobiologyCell cultureViral PathogensDNA ViralVaginaHIV-1MedicineFemaleAnatomyResearch Article
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Efficient DNA Packaging of Bacteriophage PRD1 Requires the Unique Vertex Protein P6

2007

ABSTRACT The assembly of bacteriophage PRD1 proceeds via formation of empty procapsids containing an internal lipid membrane, into which the linear double-stranded DNA genome is subsequently packaged. The packaging ATPase P9 and other putative packaging proteins have been shown to be located at a unique vertex of the PRD1 capsid. Here, we describe the isolation and characterization of a suppressor-sensitive PRD1 mutant deficient in the unique vertex protein P6. Protein P6 was found to be an essential part of the PRD1 packaging machinery; its absence leads to greatly reduced packaging efficiency. Lack of P6 was not found to affect particle assembly, because in the P6-deficient mutant infecti…

Specificity factorImmunologyMutantBiologymedicine.disease_causeMicrobiologyBacteriophageViral Proteins03 medical and health scienceschemistry.chemical_compoundVirologyDNA PackagingmedicineBacteriophage PRD1Lipid bilayer030304 developmental biology0303 health sciencesMutationStructure and AssemblyVirus Assembly030302 biochemistry & molecular biologyVirionTectivirusSalmonella entericabiology.organism_classificationMolecular biologychemistryCapsidInsect ScienceMutationBiophysicsDNAJournal of Virology
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The complete genome sequence of Lamium mild mosaic virus, a member of the genus Fabavirus

2013

Springer-Verlag Wien 2013 Abstract Lamium mild mosaic virus (LMMV) is the only one of the five members of the genus Fabavirus for which there are no nucleotide sequence data. In this study, the complete genome sequence of LMMV was determined and compared with the available complete genome sequences of other members of the genus Fabavirus. The genome was the largest of the genus but maintained the typical orga- nization, with RNA 1 of 6080 nucleotides (nt), RNA 2 of 4065 nt, and an unusually long 3 0 untranslated region in RNA 2 of 603 nt. Phylogenetic analysis of the amino acid sequences of the protease-polymerase (Pro-Pol) region and the two coat proteins confirmed that LMMV belongs to a d…

SubfamilyLMMVMolecular Sequence DataGenome ViralGenomeFabaviruBroad bean wilt virusViral ProteinsSpecies SpecificityGenusMosaic VirusesVirologySecoviridaeTobaccoComovirinaePhylogenyPlant DiseasesGeneticsWhole genome sequencingLamiaceaebiologyBase SequenceNucleic acid sequenceSettore AGR/12 - Patologia Vegetalefood and beveragesGeneral MedicineDNA-Directed RNA PolymerasesSequence Analysis DNAClassificationbiology.organism_classificationVirologyFabavirusRNA ViralCapsid ProteinsPeptide Hydrolases
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Definition of the HLA-A2 restricted peptides recognized by human CD8+ effector T cells by flow-assisted sorting of the CD8+ CD45RA+ CD28– T cell subp…

2003

SUMMARY In response to antigenic stimulation, naive MHC-class I restricted and antigen-specific CD8+ CD45RA+ CD28+ T cells undergo clonal expansion, differentiate into CD8+ CD45RO+ memory T cells and convert to CD8+ CD45RA+ CD28− T cells displaying potent immune effector functions upon re-encounter with the nominal antigen. We show that the effector CD8+ CD45RA+ CD28– T cell subset is expanded in peripheral blood lymphocytes (PBL) from patients with human papilloma virus (HPV)+ cervical lesions as well as in PBL from patients with pulmonary tuberculosis. Flow-cytometric cell sorted CD8+ CD45RA+ CD28– and CD8+ CD45RA+ CD28– T cells were tested for recognition of HLA-A2 restricted peptides de…

T cellImmunologyUterine Cervical Neoplasmschemical and pharmacologic phenomenaStreptamerBiologyT-Lymphocytes RegulatoryImmunophenotypingAntigen-Antibody ReactionsViral ProteinsInterleukin 21Bacterial ProteinsCD28 AntigensAntigenHLA-A2 AntigenmedicineHumansImmunology and AllergyCytotoxic T cellIL-2 receptorAntigen-presenting cellTuberculosis PulmonaryAntigens BacterialPapillomavirus InfectionsCD28Cell Differentiationhemic and immune systemsMycobacterium tuberculosisOriginal ArticlesFlow Cytometrymedicine.anatomical_structureImmunologyLeukocyte Common AntigensFemaleCell DivisionClinical and Experimental Immunology
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