0000000000024051

AUTHOR

Covadonga R. Arias

showing 6 related works from this author

A comparison of strategies for the detection and recovery of Vibrio vulnificus from marine samples of the Western Mediterranean coast

1998

Summary We have compared the effectiveness of culture-based methods and a DNA-based method for the detection, of Vibrio vulnificus from seawater and three types of shellfish collected from the coastal waters of Valencia, Spain. For culture-based method, we used two selective media, thiosulphate-citrate-bile salts-sucrose (TCBS), and cellobiose-polymyxin B-colistin (CPC) agars with and without previous enrichment in alkaline-saline-peptone-water (APWS). Presumptive colonies were confirmed as V. vulnificus by the polymerase chain reaction (PCR) using previously described 23S rRNA V. vulficus -specific sequences as primers (Dvu 9V and Dvu 45R). Direct detection was accomplished by a nested-PCR…

Vibrio vulnificusDNA RibosomalPolymerase Chain ReactionSensitivity and SpecificityApplied Microbiology and BiotechnologyMicrobiologyMicrobiologylaw.inventionVibrionaceaelaw23S ribosomal RNAMediterranean SeaAnimalsSeawaterEcology Evolution Behavior and SystematicsShellfishPolymerase chain reactionShellfishVibrioBacteriological Techniquesbiologybiology.organism_classificationIsolation (microbiology)Culture MediaRNA Ribosomal 23SSpainSeawaterBacteria
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A Polyphasic Approach to Study the Intraspecif ic Diversity Amongst Vibrio vulnificus Isolates

1997

Summary A polyphasic taxonomic approach using phenotypic and molecular genetic techniques, was carried out on the species Vibrio vulnificus in order to study its intraspecific diversity. Seven techniques, including phenotypic (API 20E, BIOLOG, total protein profiles, serotyping, ELISA), and genotypic methods (ribotyping and AFLP), were employed on 80 V. vulnificus strains of biotypes 1 and 2, including 9 reference cultures. The isolates came from different geographic origins (USA, Spain, Belgium, Sweden, Norway, Japan, Thailand) and types of samples (clinical, health/diseased fish, seafood, water). Diversity indexes calculated for strains of both biotypes revealed a higher phenotypic and ge…

SerotypeGeneticsGenetic diversitybiologyVibrio vulnificusbiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyMicrobiologyRibotypingDNA profilingGenotypeAmplified fragment length polymorphismTypingEcology Evolution Behavior and SystematicsSystematic and Applied Microbiology
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In situ analysis of the bacterial communities associated to farmed eel by whole-cell hybridization.

1999

Bacterial communities in water samples and eel slime were investigated by fluorescence in situ hybridization of whole bacterial cells in an eel intensive culture system over 1 year. A newly developed probe, matching 27 Vibrio spp., and a specific probe for Vibrio vulnificus were used. Phylogenetic probes complementary to selected regions of the 16S and 23S ribosomal RNA revealed that Proteobacteria of the alpha and beta subclass were predominant in water and eel slime. Members of the gamma subclass (e.g. vibrios and aeromonads) were more abundant in eel slime, although no V. vulnificus was detected.

endocrine systemanimal structuresColony Count MicrobialVibrio vulnificusAquacultureApplied Microbiology and BiotechnologyMicrobiologyVibrionaceae23S ribosomal RNARNA Ribosomal 16SmedicineAnimalsIn Situ Hybridization FluorescencePhylogenyAlphaproteobacteriaVibrioEelsbiologymedicine.diagnostic_testBacteriafungiBetaproteobacteriaequipment and suppliesbiology.organism_classificationVibrioRNA BacterialRNA Ribosomal 23SbacteriaProteobacteriaMolecular probeOligonucleotide ProbesWater MicrobiologyBacteriaFluorescence in situ hybridizationLetters in applied microbiology
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Nested PCR method for rapid and sensitive detection of Vibrio vulnificus in fish, sediments, and water

1995

A nested PCR for the detection of Vibrio vulnificus in fish farms was developed as an alternative to cultural methods by using universal primers flanking the V. vulnificus-specific sequences directed against 23S rRNA genes. This specific assay detected 10 fg of DNA or 12 to 120 cells in artificially inoculated samples without enrichment and within 24 h.

DNA BacterialMolecular Sequence DataVibrio vulnificusPolymerase Chain ReactionSensitivity and SpecificityApplied Microbiology and Biotechnologylaw.inventionMicrobiologylawVibrionaceae23S ribosomal RNAAnimalsRibosomal DNAPolymerase chain reactionDNA PrimersVibrioBase SequenceEcologybiologyFishesRibosomal RNAbiology.organism_classificationMolecular biologyVibrioRNA Ribosomal 23SEvaluation Studies as TopicGenes BacterialWater MicrobiologyNested polymerase chain reactionResearch ArticleFood ScienceBiotechnology
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Genetic relatedness among environmental, clinical, and diseased-eel Vibrio vulnificus isolates from different geographic regions by ribotyping and ra…

1998

ABSTRACT Genetic relationships among 132 strains of Vibrio vulnificus (clinical, environmental, and diseased-eel isolates from different geographic origins, as well as seawater and shellfish isolates from the western Mediterranean coast, including reference strains) were analyzed by random amplified polymorphic DNA (RAPD) PCR. Results were validated by ribotyping. For ribotyping, DNAs were digested with Kpn I and hybridized with an oligonucleotide probe complementary to a highly conserved sequence in the 23S rRNA gene. Random amplification of DNA was performed with M13 and T3 universal primers. The comparison between ribotyping and RAPD PCR revealed an overall agreement regarding the high l…

Vibrio vulnificusApplied Microbiology and Biotechnologylaw.inventionRibotypingFish DiseaseslawAnimalsHumansSeawaterRibosomal DNAPolymerase chain reactionPhylogenyShellfishVibrioGeneticsGenetic diversityEelsEcologybiologyMediterranean RegionFishesGenetic Variationbiology.organism_classificationRAPDBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueRNA Ribosomal 23SEnvironmental and Public Health MicrobiologyGenetic markerVibrio InfectionsRestriction fragment length polymorphismDNA ProbesWater MicrobiologyFood ScienceBiotechnologyApplied and environmental microbiology
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Low incidence of Vibrio vulnificus among Vibrio isolates from sea water and shellfish of the western Mediterranean coast.

1999

A specific search for Vibrio vulnificus in natural marine samples from the Spanish Mediterranean Sea was carried out by nested PCR and cultural approaches using thiosulphate-citrate-bile salts-sucrose agar (TCBS) and cellobiose-polymixin B-colistin agar (CPC), incubated at 40 degrees C, as selective media. Presumptive colonies were identified by PCR using specific primers against 23S rRNA sequences. This species was isolated from sea water and edible bivalves, mainly after preenrichment in alkaline peptone water (APW) at 40 degrees C followed by CPC agar. None of the V. vulnificus isolates identified corresponded to serovar E. Dominant Vibrio species on directly inoculated TCBS plates incub…

Donax trunculusSerotypeVeterinary medicinefood.ingredientColony Count MicrobialVibrio vulnificusApplied Microbiology and BiotechnologyDNA RibosomalPolymerase Chain ReactionMediterranean seafoodSpecies SpecificityVibrionaceaeMediterranean SeaAgarAnimalsSeawaterSerotypingShellfishShellfishVibriobiologyEcologyGeneral Medicinebiology.organism_classificationVibrioCulture MediaRNA Ribosomal 23SMolluscaWater MicrobiologyBiotechnologyJournal of applied microbiology
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