0000000000051855

AUTHOR

Philippe Roch

showing 11 related works from this author

Gene expression specificity of the mussel antifungal mytimycin (MytM)

2011

Abstract We previously reported the nucleotide sequences and diversity of mytimycin (MytM) from the Mediterranean mussel, Mytilus galloprovincialis. Using real-time PCR (q-PCR), we observed that the MytM gene was mainly expressed in circulating hemocytes and to a less extent in the mantle. In vivo challenge with bacteria or with the yeast, Candida albicans, did not increase the expression as measured by q-PCR in hemocytes. By contrast, injection of the filamentous fungus, Fusarium oxysporum, induced a sudden and strong increase of expression at 9h p.i. (stimulation index of 25.7 ± 2.1). Optimum stimulating dose was 104 spores of F. oxysporum per mussel. In the same samples, AMP mytilin and …

Hemocytesbeta-GlucansspecificityStimulationAquatic ScienceMicrobiologyMicrococcusAntifungal peptidechemistry.chemical_compoundAdjuvants ImmunologicFusariumGene expressionEnvironmental ChemistryAnimalsCandida albicansVibrioMytilusInnate immunitybiologyQ-PCRMytilinGene Expression ProfilingGeneral MedicineMyticinbiology.organism_classificationYeastGene expression profilingchemistryGene Expression RegulationchallengeBacteriaAntimicrobial Cationic Peptides
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Individual variability of mytimycin gene expression in mussel

2012

The antifungal peptide mytimycin (MytM) is synthesized by hemocytes of the Mediterranean mussel, Mytilus galloprovincialis. In addition to sequence and gene structure diversities previously reported from pooled hemocytes, the present report focused on the expression of mytm gene in individual M. galloprovincialis, before and after challenge. Within untreated mussel, MytM mRNA was observed by ISH in about 42% of circulating hemocytes, characterized by large, diffuse nucleus. Injection with Fusarium oxysporum increased such percentage, but in only some of the mussels. Similarly, MytM gene expression increased after injection in only some of the mussels, as measured by qPCR. Responders and not…

Mediterranean musselHemocytesanimal structuresPopulationAquatic ScienceReal-Time Polymerase Chain ReactionMicrobiologyFusariumFusarium oxysporumGene expressionAnimalsEnvironmental ChemistryRNA MessengereducationGeneIn Situ HybridizationMytilusMessenger RNAeducation.field_of_studybiologyGene Expression ProfilingfungiGeneral MedicineMusselbiology.organism_classificationMytilusGene Expression RegulationAntifungal Antimicrobial Gene expression Challenge Innate immunityAntimicrobial Cationic PeptidesFish & Shellfish Immunology
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cDNA sequence and tissue expression of an antimicrobial peptide, dicentracin; a new component of the moronecidin family isolated from head kidney leu…

2007

A 483-bp cDNA was isolated from sea bass (Dicentrarchus labrax) head kidney leukocytes, dicentracin, using PCR primers designed from conserved moronecidin domains. Gene bank analysis revealed that dicentracin cDNA belongs to the moronecidin family. As deduced from alignment with Morone chrysops moronecidin, the precursor of 79 aa appeared to be composed of a signal peptide of 22 aa, followed by the mature AMP (antimicrobial peptide) of 22 aa named dicentracin, and a C-terminal extension of 35 aa. Dicentracin precursor displayed 3 aa substitutions with other moronecidin sequence but none in the mature peptide sequence. Using in situ hybridization assay, dicentracin gene expression was observ…

Fish ProteinsSignal peptideDNA ComplementaryPhysiologyMolecular Sequence DataIn situ hybridizationBiologyKidneyBiochemistryPeritoneal cavityComplementary DNAGene expressionLeukocytesmedicineAnimalsAmino Acid SequenceRNA MessengerCloning MolecularSea bassPeritoneal CavityMolecular BiologyPeptide sequencePhylogenyHead KidneyBase SequenceSequence Homology Amino AcidMolecular biologymedicine.anatomical_structureGene Expression RegulationBassAntimicrobial Cationic Peptides
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MIF from mussel: coding sequence, phylogeny, polymorphism, 3D model and regulation of expression.

2012

Abstract Three macrophage migration inhibitory factor (MIF)-related sequences were identified from a Mytilus galloprovincialis EST library. The consensus sequence included a 5′-UTR of 32 nucleotides, the complete ORF of 345 nucleotides, and a 3′-UTR of 349 nucleotides. As for other MIFs, M. galloprovincialis ORF does not include any signal or C-terminus extensions. The translated sequence of 115 amino acids possesses a molecular mass of 12,681.4, a pI of 6.27 and a stability index of 21.48. Its 3D structure resembles human MIF except for one shorter α-helix. Although evolutionary separated from ticks and vertebrates, Mg-MIF appeared to be closely related to Pinctada fucata and Haliotis, but…

Cytokine Gene regulation Challenge Bacteria Fungus q-PCR Innate immunity MytiluModels MolecularHemocytesImmunologyMolecular Sequence DataPhylogeneticsConsensus sequenceCoding regionAnimalsPinctada fucataNucleotideAmino Acid SequenceCloning MolecularMacrophage Migration-Inhibitory FactorsPhylogenyGene LibraryGeneticsRegulation of gene expressionchemistry.chemical_classificationExpressed Sequence TagsMytilusbiologyBase SequenceGene Expression Profilingbiology.organism_classificationAmino acidchemistryItalyMacrophage migration inhibitory factorFranceSequence AlignmentDevelopmental BiologyDevelopmental and comparative immunology
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First evidence of antimicrobial activity of neurotoxin 2 from anemonia sulcata (Cnidaria)

2014

International audience; We investigated the antibacterial activity of Anemonia sulcata (Cnidaria, Anthozoa) tentacle and body acidic extracts. Biochemical purification consisted of first step on solid phase Sep-Pak C8 column followed by several HPLC runs on C18 column using different conditions. Anti-Micrococcus lysodeikticus activity has been detected in 40 % acetonitrile fractions. The resulting purified molecule from tentacles had a molecular mass determined by MALDI-TOF mass spectrum of 4946,299 Da and has been completely sequenced. Its aa sequence revealed identity with the Neurotoxin 2 (ATX-II), a Na + channel blocking toxins. Consequently, ATX-II appeared to display a dual role as to…

lcsh:Biology (General)antimicrobial peptideMicrococcus lysodeikticusneurotoxin[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/Hydrologylcsh:QH301-705.5antimicrobial peptide; Anemonia sulcata; ATX II; neurotoxin; Micrococcus lysodeikticusATX IIAnemonia sulcata
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HSP70 gene expression in Mytilus galloprovincialis hemocytes is triggered by moderate heat shock and Vibrio anguillarum, but not by V. splendidus or …

2005

Complete sequence of HSP70 cDNA from the mussel, Mytilus galloprovincialis was established before quantifying its expression following moderate heat shock or injection of heat-killed bacteria. HSP70 cDNA is comprised of 2378 bp including one ORF of 654 aa, with a predicted 70 bp 5'-UTR and a 343 bp 3'-UTR (GenBank, 18 Jan 05, AY861684). Alignment identity ranged from 89% for Crassostrea ariakensis to 72% for C. virginica. Curiously, HSP70 gene and cDNA sequences from M. galloprovincialis, deposited later (03 and 27 May), show only 73% identity with the present sequence. Meanwhile, characteristic motifs of the HSP70 family were located in conserved positions. Expression of HSP70 gene was qua…

Untranslated regionVibrio anguillarumHemocytesMolecular Sequence DataImmunologyMicrococcusMicrobiologyComplementary DNAGene expressionAnimalsHSP70 Heat-Shock ProteinsAmino Acid SequenceCloning MolecularPhylogenyVibrioMytilusBase SequencebiologyReverse Transcriptase Polymerase Chain Reactionbiology.organism_classificationMytilusRandom Amplified Polymorphic DNA TechniqueHousekeeping geneHsp70RNA28S rRNA Gene expression Heat shock HSP70Sequence AlignmentHeat-Shock ResponseBacteriaDevelopmental BiologyDevelopmental & Comparative Immunology
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Polymorphism of mytilin B mRNA is not traslated into mature peptide

2008

Diversity of mRNAs from mytilin B, one of the five mytilins identified in the Mediterranean mussel, Mytilus galloprovincialis, has been investigated from circulating hemocytes. One mussel expressed simultaneously two to ten different mytilin B mRNAs as observed in denaturing gradient gel electrophoresis (DGGE), defining 10 individual DGGE patterns (named A to J) within the mussels from Messina, Sicily (Italy). Three patterns accounted for 79% of the individuals whereas other patterns were found in only 2-7% of the 57 analyzed mussels. Base mutations were observed at specific locations, mainly within COOH-terminus and 3'UTR, leading to 36 nucleotide sequence variants and 21 different coding …

ImmunologyMolecular Sequence DataAntimicrobial peptide Defensin mRNA polymorphism DGGE.Evolution MolecularExonchemistry.chemical_compoundOpen Reading FramesAnimalsAmino Acid SequenceRNA MessengerSelection GeneticMolecular BiologyGenePeptide sequencePhylogenyGeneticsElectrophoresis Agar GelMytilusGenomePolymorphism GeneticbiologyBase SequenceMytilinNucleic acid sequenceIntronExonsbiology.organism_classificationMolecular biologyMytiluschemistryGene Expression RegulationProtein BiosynthesisPeptidesTemperature gradient gel electrophoresisAntimicrobial Cationic Peptides
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Differential involvement of mussel hemocyte sub-populations in the clearance of bacteria.

2008

Abstract Mussels are filter-feeders living in a bacteria-rich environment. We have previously found that numerous bacterial species are naturally present within the cell-free hemolymph, including several of the Vibrio genus, whereas the intra-cellular content of hemocytes was sterile. When bacteria were injected into the circulation of the mussel, the number of living intra-hemocyte bacteria dramatically increased in less than an hour, suggesting intense phagocytosis, then gradually decreased, with no viable bacteria remaining 12 h post-injection for Micrococcus lysodeikticus, 24 h for Vibrio splendidus and more than 48 h for V ibrio anguillarum. The total hemocyte count (THC) was dramatica…

Vibrio anguillarumHemocytesPhagocytosisAntimicrobial peptidesColony Count MicrobialMytiluAquatic ScienceFlow cytometryMicrobiologyMicrococcusHemolymphHemolymphHyalinocytemedicineEnvironmental ChemistryAnimalsVibrio anguillarumGram-Positive Bacterial InfectionsVibrioMytilusVibrio splendidubiologymedicine.diagnostic_testGranulocyteGeneral MedicineMusselMolluscsbiology.organism_classificationFlow CytometryMicrococcus lysodeikticuVibrioVibrio InfectionsClearanceBacteriaFishshellfish immunology
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Toll signal transduction pathway in bivalves: Complete cds of intermediate elements and related gene transcription levels in hemocytes of immune stim…

2014

Based on protein domain structure and organization deduced from mRNA contigs, 15 transcripts of the Toll signaling pathway have been identified in the bivalve, Mytilus galloprovincialis. Identical searches performed on publicly available Mytilus edulis ESTs revealed 11 transcripts, whereas searches performed in genomic and new transcriptome sequences of the Pacific oyster, Crassostrea gigas, identified 21 Toll-related transcripts. The remarkable molecular diversity of TRAF and IKK coding sequences of C. gigas, suggests that the sequence data inferred from Mytilus cDNAs may not be exhaustive. Most of the Toll pathway genes were constitutively and ubiquitously expressed in M. galloprovinciali…

animal structuresMolluskToll signaling pathwayInnate immunity; Mollusks; Mytilus; Signal transduction; Toll pathway; NF-κBImmunologyProtein domainSettore BIO/05 - ZoologiaMytiluSignal transductionNF-κBTranscriptomeTranscription (biology)Animals[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/HydrologyGenePhylogenyComputingMilieux_MISCELLANEOUSMytilusInnate immunityMessenger RNAInnate immune systemMollusksToll-like receptors; signal transduction; Mytilus-galloprovincialis Lmk (bivalvia)biologyEcologyfungiMytilus-galloprovincialis Lmk (bivalvia)biology.organism_classificationMytilusToll-like receptorsCell biologyInnate immunity; Mollusks; Mytilus; NF-κB; Signal transduction; Toll pathwayToll pathwayNF-jBDevelopmental Biology
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Specific expression of antimicrobial peptide and HSP70 genes in response to heat-shock and several bacterial challenges in mussels

2007

Abstract Defensin, mytilin and myticin are antimicrobial peptides (AMP) involved in mussel innate immunity. Their in vitro antibacterial activity is different according to the targeted bacterial species. To determine if this specificity is correlated to different regulations of gene expressions, adult mussels were challenged in vivo with either Vibrio splendidus LGP32, Vibrio anguillarum , Micrococcus lysodeikticus or by heat shock. RNAs were isolated from circulating hemocytes and AMP mRNAs were quantified by Q-PCR using 28S rRNA as housekeeping gene. In addition, HSP70 gene expression was also quantified as representing non-specific response to stress. In naive mussels, the three AMP mRNA…

Vibrio anguillarumHot TemperatureTime Factorsantimicrobial peptidemusselAntimicrobial peptidesecological immunologyAquatic ScienceMicrococcusMicrobiologychemistry.chemical_compoundAnimalsEnvironmental ChemistryHSP70 Heat-Shock ProteinsRNA MessengerDefensinHSP70DNA PrimersVibrioMytilusRegulation of gene expressionbiologyReverse Transcriptase Polymerase Chain ReactionMytilinmolluskGeneral Medicinebiology.organism_classificationMyticinMolecular biologyImmunity InnateHousekeeping geneHsp70Gene Expression Regulationchemistrygene regulationAntimicrobial Cationic PeptidesFish & Shellfish Immunology
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Lysozyme gene expression and hemocyte behaviour in the Mediterranean mussel, Mytilus galloprovincialis, after injection of various bacteria or temper…

2008

The aim of the present study was to evaluate the expression of the Mytilus galloprovincialis lysozyme gene in different in vivo stress situations, including injection of bacteria Vibrio splendidus LGP32, Vibrio anguillarum or Micrococcus lysodeikticus, as well as heat shock at 30 C and cold stress at 5 C. Injection of V. splendidus LGP32 resulted in: (i) a general down-regulation of lysozyme gene expression, as quantified by Q-PCR; (ii) reduction in the number of circulating hemocytes; (iii) decrease in the percentage of circulating hemocytes expressing lysozyme mRNA which was now restricted to only small cells, as observed by ISH; and (iv) accumulation of hemocytes expressing lysozyme in t…

Vibrio anguillarumHemocytesPopulationLysozymeMytiluVibrio splendidusAquatic ScienceGene Expression Regulation EnzymologicMicrobiologyMicrococcus03 medical and health scienceschemistry.chemical_compoundISHGene expressionRNA Ribosomal 28SEnvironmental ChemistryMicrococcus lysodeikticusAnimalsVibrio anguillarumeducation030304 developmental biologyVibrioMytilus0303 health sciencesMessenger RNAeducation.field_of_studyVibrio splendidubiologyQ-PCRMusclesTemperature04 agricultural and veterinary sciencesGeneral MedicineMolluscsbiology.organism_classificationMicrococcus lysodeikticuMytilusReal-time polymerase chain reactionchemistryHeat shockQ PCR040102 fisheries0401 agriculture forestry and fisheriesMuramidaseGene expressionLysozymeBacteriaFishshellfish immunology
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