0000000000053849

AUTHOR

Inna Inashkina

0000-0002-7560-797x

showing 8 related works from this author

Alternative Polyadenylation Events Contribute to the Induction of NF-ATc in Effector T Cells

1999

Abstract The transcription factor NF-ATc is synthesized in three prominent isoforms. These differ in the length of their C terminal peptides and mode of synthesis. Due to a switch from the use of a 3′ polyA site to a more proximal polyA site, NF-ATc expression switches from the synthesis of the two longer isoforms in naive T cells to that of short isoform A in T effector cells. The relative low binding affinity of cleavage stimulation factor CstF-64 to the proximal polyA site seems to contribute to its neglect in naive T cells. These alternative polyadenylation events ensure the rapid accumulation of high concentrations of NF-ATc necessary to exceed critical threshold levels of NF-ATc for g…

Gene isoformPolyadenylationImmunologyMolecular Sequence DataGene inductionBiologyLymphocyte ActivationTransfectionT-Lymphocytes RegulatoryJurkat CellsMiceGenes ReporterCritical thresholdTumor Cells CulturedImmunology and AllergyAnimalsHumansAmino Acid SequenceCloning MolecularLuciferasesTranscription factormRNA Cleavage and Polyadenylation FactorsCleavage stimulation factorBase SequenceNFATC Transcription FactorsEffectorNuclear ProteinsRNA-Binding ProteinsMolecular biologyDNA-Binding ProteinsInfectious DiseasesPoly ATranscription FactorsImmunity
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Microbiome symbionts and diet diversity incur costs on the immune system of insect larvae

2017

Communities of symbiotic microorganisms that colonize the gastrointestinal tract play an important role in food digestion and protection against opportunistic microbes. Diet diversity increases the number of symbionts in the intestines, a benefit that is considered to impose no cost for the host organism. However, less is known about the possible immunological investments that hosts have to make in order to control the infections caused by symbiont populations that increase due to diet diversity. By using taxonomical composition analysis of the 16S rRNA V3 region, we show that Enterococci are the dominating group of bacteria in the midgut of the larvae of the greater wax moth (Galleria mell…

DNA Bacterial0301 basic medicineanimal structuresPhysiology030106 microbiologyAntimicrobial peptidesMothsAquatic ScienceMicrobiology03 medical and health sciencesImmune systemImmunityRNA Ribosomal 16SAnimalsHerbivoryMicrobiomeMolecular BiologyEcology Evolution Behavior and SystematicsOrganismBacteriabiologyfungiGastrointestinal Microbiomebiochemical phenomena metabolism and nutritionbiology.organism_classificationImmunity InnateGastrointestinal MicrobiomeGalleria mellonella030104 developmental biologyLarvaInsect Scienceta1181bacteriaAnimal Science and Zoologyhuman activitiesBacteriaJournal of Experimental Biology
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Food quality affects the expression of antimicrobial peptide genes upon simulated parasite attack in the larvae of greater wax moth

2017

Predator‐prey interactions are an important evolutionary force affecting the immunity of the prey. Parasitoids and mites pierce the cuticle of their prey, which respond by activating their immune system against predatory attacks. Immunity is a costly function for the organism, as it often competes with other life‐history traits for limited nutrients. We tested whether the expression of antimicrobial peptides (AMP) of the larvae of the greater wax moth Galleria mellonella (L.) (Lepidoptera: Pyralidae) changes as a consequence of insertion of a nylon monofilament, which acts like a synthetic parasite. The treatment was done for larvae grown on a high‐quality vs. a low‐quality diet. The expres…

0301 basic medicineanimal structuresInnate immune systembiologyCuticlefungiAntimicrobial peptidesZoologybiochemical phenomena metabolism and nutritionbiology.organism_classificationPredationLepidoptera genitaliaGalleria mellonella03 medical and health sciences030104 developmental biologyInsect ScienceParasite hostingta1181Ecology Evolution Behavior and SystematicsPyralidaeEntomologia Experimentalis et Applicata
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EAST/SeSAME syndrome: Review of the literature and introduction of four new Latvian patients.

2018

EAST (Epilepsy, Ataxia, Sensorineural deafness, Tubulopathy) or SeSAME (Seizures, Sensorineural deafness, Ataxia, Mental retardation, and Electrolyte imbalance) syndrome is a rare autosomal recessive syndrome first described in 2009 independently by Bockenhauer and Scholl. It is caused by mutations in KCNJ10, which encodes Kir4.1, an inwardly rectifying K+ channel found in the brain, inner ear, kidney and eye. To date, 16 mutations and at least 28 patients have been reported. In this paper, we review mutations causing EAST/SeSAME syndrome, clinical manifestations in detail, and efficacy of treatment in previously reported patients. We also report a new Latvian kindred with 4 patients. In co…

0301 basic medicinePediatricsmedicine.medical_specialtyAtaxiaHearing Loss SensorineuralKCNJ10030105 genetics & hereditySensorineural deafnessKidney03 medical and health sciencesEpilepsyTubulopathySeizuresIntellectual DisabilityIntellectual disabilityGeneticsmedicineEAST syndromeHumansEye AbnormalitiesPotassium Channels Inwardly RectifyingGenetics (clinical)SeSAME syndromebiologybusiness.industryBrainmedicine.diseaseLatvia030104 developmental biologyPhenotypeEar InnerMutationbiology.proteinmedicine.symptombusinessClinical genetics
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Differentiating cancer cells reveal early large-scale genome regulation by pericentric domains.

2021

Abstract Finding out how cells prepare for fate change during differentiation commitment was our task. To address whether the constitutive pericentromere-associated domains (PADs) may be involved, we used a model system with known transcriptome data, MCF-7 breast cancer cells treated with the ErbB3 ligand heregulin (HRG), which induces differentiation and is used in the therapy of cancer. PAD-repressive heterochromatin (H3K9me3), centromere-associated-protein-specific, and active euchromatin (H3K4me3) antibodies, real-time PCR, acridine orange DNA structural test (AOT), and microscopic image analysis were applied. We found a two-step DNA unfolding after 15–20 and 60 min of HRG treatment, re…

0303 health sciencesEuchromatinNucleolusCentromere clusteringHeterochromatinNeuregulin-1CentromereBiophysicsBreast NeoplasmsBiologyChromatinCell biologyTranscriptome03 medical and health sciences0302 clinical medicineTranscription (biology)HeterochromatinConstitutive heterochromatinHumans030217 neurology & neurosurgery030304 developmental biologyBiophysical journal
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DNA damage causes TP53-dependent coupling of self-renewal and senescence pathways in embryonal carcinoma cells.

2013

Recent studies have highlighted an apparently paradoxical link between self-renewal and senescence triggered by DNA damage in certain cell types. In addition, the finding that TP53 can suppress senescence has caused a re-evaluation of its functional role in regulating these outcomes. To investigate these phenomena and their relationship to pluripotency and senescence, we examined the response of the TP53-competent embryonal carcinoma (EC) cell line PA-1 to etoposide-induced DNA damage. Nuclear POU5F1/OCT4A and P21CIP1 were upregulated in the same cells following etoposide-induced G 2M arrest. However, while accumulating in the karyosol, the amount of OCT4A was reduced in the chromatin fract…

SenescenceCyclin-Dependent Kinase Inhibitor p21OCT4A/POU5F1Embryonal Carcinoma Stem CellssenescenceDNA RepairDNA repairDNA damagetumor cellsBiologyProtein Serine-Threonine Kinasesself-renewalHistonesAurora KinasesCell Line TumorReportAutophagyAurora Kinase BHumansTP53PhosphorylationRNA Small InterferingMolecular BiologyMitosisCellular SenescenceCyclin-Dependent Kinase Inhibitor p16EtoposideOvarian NeoplasmsEmbryonal Carcinoma Stem CellsCell BiologyG2-M DNA damage checkpointbeta-GalactosidasepluripotencyAntineoplastic Agents PhytogenicChromatinUp-RegulationG2 Phase Cell Cycle CheckpointsCheckpoint Kinase 2Cancer researchDNA damageFemaleRNA InterferenceRad51 RecombinaseTumor Suppressor Protein p53Cell agingOctamer Transcription Factor-3Developmental BiologyCell cycle (Georgetown, Tex.)
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“Mitotic Slippage” and Extranuclear DNA in Cancer Chemoresistance: A Focus on Telomeres

2020

Mitotic slippage (MS), the incomplete mitosis that results in a doubled genome in interphase, is a typical response of TP53-mutant tumors resistant to genotoxic therapy. These polyploidized cells display premature senescence and sort the damaged DNA into the cytoplasm. In this study, we explored MS in the MDA-MB-231 cell line treated with doxorubicin (DOX). We found selective release into the cytoplasm of telomere fragments enriched in telomerase reverse transcriptase (hTERT), telomere capping protein TRF2, and DNA double-strand breaks marked by γH2AX, in association with ubiquitin-binding protein SQSTM1/p62. This occurs along with the alternative lengthening of telomeres (ALT) and DNA repa…

PolyploidizationALTSQSTM1/p62lcsh:ChemistryNeoplasmsSequestosome-1 Proteincellular senescenceTelomeric Repeat Binding Protein 2mtTP53 cancerTelomeraseAmoeboid conversionlcsh:QH301-705.5Telomere ShorteningSpectroscopyAntibiotics AntineoplasticGeneral MedicineTelomereComputer Science ApplicationsCell biologyinverted meiosisExtranuclear DNA<i>mtTP53</i> cancerSpo11DNA repairTelomere CappingMitosisBudding of mitotic progenygenotoxic treatmentamoeboid conversionInverted meiosisBiologyCellular senescenceArticleCatalysisInorganic ChemistryMeiosisCell Line Tumorextranuclear DNAHumansTelomerase reverse transcriptasePhysical and Theoretical ChemistryMolecular BiologyMitosisCell ProliferationGenotoxic treatmentOrganic ChemistryRecombinational DNA RepairCell Cycle CheckpointsDNA<i>SQSTM1/p62</i>polyploidizationTelomerelcsh:Biology (General)lcsh:QD1-999DoxorubicinDrug Resistance Neoplasmbiology.proteinHomologous recombinationbudding of mitotic progenyDNA DamageInternational Journal of Molecular Sciences
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Data from: Microbiome symbionts and diet diversity incur costs on the immune system of insect larvae

2017

Communities of symbiotic microorganisms that colonize the gastrointestinal tract play an important role in food digestion and protection against opportunistic microbes. Diet diversity increases the number of symbionts in the intestines, a benefit that is considered to impose no cost for the host organism. However, less is known about the possible immunological investments that hosts have to make in order to control the infections caused by symbiont populations that increase due to diet diversity. By using taxonomical composition analysis of the 16S rRNA V3 region, we show that Enterococci are the dominating group of bacteria in the midgut of the larvae of the greater wax moth (Galleria mell…

encapsulation responseanimal structuresfungibiochemical phenomena metabolism and nutritionLife sciencesimmunitymedicine and health careGalleria mellonellaMedicinebacteriaAntimicrobial peptidesBacterial endosymbiontsDiet diversityhuman activities
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