0000000000236322

AUTHOR

Charles W. Gehrke

showing 4 related works from this author

Presence of phosphorylatedO-ribosyl-adenosine In T-ψ-stem of yeast methlonine initiator tRNA

1989

We report in this paper on isolation and characterization of two unknown nucleosides G* and [A*] located in the T-psi-stem of yeast methionine initiator tRNA, using the combined means of HPLC protocols, real time UV-absorption spectrum, and post-run mass spectrometry by electron impact or fast atom bombardment. The G* nucleoside in position 65 was identified as unmodified guanosine. The structure of the unknown [A*] in position 64 was characterized as an isomeric form of O-ribosyl-adenosine by comparison of its chromatographic, UV-spectral and mass spectrometric properties with those of authentic O-alpha-ribofuranosyl-(1"----2')-adenosine isolated from biosynthetic poly(adenosine diphosphat…

Poly Adenosine Diphosphate RiboseAdenosineRNA Transfer MetIon chromatographySaccharomyces cerevisiaeGuanosineSaccharomyces cerevisiaeBiologyChromatography DEAE-CelluloseGas Chromatography-Mass Spectrometrychemistry.chemical_compoundMethionineGeneticsmedicinePhosphorylationChromatography High Pressure LiquidGuanosineAdenosine diphosphate riboseNucleosidesRNA Transfer Amino Acid-SpecificFast atom bombardmentbiology.organism_classificationAdenosineYeastchemistryBiochemistryNucleic Acid ConformationNucleosidemedicine.drugNucleic Acids Research
researchProduct

O-Ribosyl-phosphate purine as a constant modified nucleotide located at position 64 in cytoplasmic initiator tRNAsMetof yeasts

1991

The unknown modified nucleotide G*, isolated from both Schizosaccharomyces pombe and Torulopsis utilis initiator tRNAs(Met), has been identified as an O-ribosyl-(1"----2')-guanosine-5"-phosphate, called Gr(p), by means of HPLC, UV-absorption, mass spectrometry and periodate oxidation procedures. By comparison with the previously published structure of Ar(p) isolated from Saccharomyces cerevisiae initiator tRNA(Met), the (1"----2')-glycosidic bond in Gr(p) has been postulated to have a beta-spatial conformation. The modified nucleotide Gr(p) is located at position 64 in the tRNA(Met) molecules, i.e. at the same position as Ar(p). Since we have also characterized Gr(p) in Candida albicans ini…

chemistry.chemical_classificationRNA Transfer MetbiologyPeriodic AcidSaccharomyces cerevisiaeGuanosine MonophosphateGuanosineRNA Fungalbiology.organism_classificationSaccharomycesMass Spectrometrychemistry.chemical_compoundchemistryBiochemistrySchizosaccharomycesGuanosine monophosphateTransfer RNASchizosaccharomyces pombeGeneticsSpectrophotometry UltravioletNucleotideOxidation-ReductionChromatography High Pressure LiquidSchizosaccharomycesCandidaNucleic Acids Research
researchProduct

Eukaryotic tRNAs(Pro): primary structure of the anticodon loop; presence of 5-carbamoylmethyluridine or inosine as the first nucleoside of the antico…

1990

The modified nucleoside U*, located in the first position of the anticodon of yeast, chicken liver and bovine liver tRNA(Pro) (anticodon U*GG), has been determined by means of TLC, HPLC, ultraviolet spectrum and gas chromatography-mass spectrometry. The structure was established as 5-carbamoylmethyluridine (ncm5U). In addition, we report on the primary structures of the above-mentioned tRNAs as well as those which have the IGG anticodon. In yeast, the two tRNA(Pro) (anticodons U*GG and IGG) differ by eight nucleotides, whereas in chicken and in bovine liver, both anticodons are carried by the same 'body tRNA' with one posttranscriptional exception at position 32, where pseudouridine is asso…

StereochemistryMolecular Sequence DataBiophysicsBiologyBiochemistryPseudouridinechemistry.chemical_compoundRNA Transfer ProRNA TransferStructural BiologyYeastsGeneticsmedicineAnticodonAnimalsNucleotideInosineUridinechemistry.chemical_classificationChromatographyBase SequenceMolecular StructureProtein primary structureFungal geneticsRNARNA FungalRNA Transfer Amino Acid-SpecificInosinechemistryBiochemistryTransfer RNANucleic Acid ConformationCattleSpectrophotometry UltravioletNucleosideChickensmedicine.drugBiochimica et biophysica acta
researchProduct

Identification and structural characterization of O-beta-ribosyl-(1"----2')-adenosine-5"-phosphate in yeast methionine initiator tRNA.

1990

We report in this paper on the complete structure determination of the modified nucleotide A*, now called Ar(p), that was previously identified in yeast methionine initiator tRNA as an isomeric form of O-ribosyl-adenosine bearing an additional phosphoryl-monoester group on its ribose2 moiety. By using the chemical procedure of periodate oxidation and subsequent beta-elimination with cyclohexylamine on mono- and dinucleotides containing Ar(p), we characterized the location of the phosphate group on the C-5" of the ribose2 moiety, and the linkage between the two riboses as a (1"----2')-glycosidic bond. Since the structural difference between phosphatase treated Ar(p) and authentic O-alpha-rib…

chemistry.chemical_classificationAdenosine monophosphateMethionineRNA Transfer MetStereochemistryChemical structurePhosphataseCyclohexylamineSaccharomyces cerevisiaeBiologyAdenosine Monophosphatechemistry.chemical_compoundchemistryBiochemistryTransfer RNAGeneticsMoietyNucleotideIndicators and ReagentsOxidation-ReductionChromatography High Pressure LiquidNucleic acids research
researchProduct