Use of Bile Acids in Pharmacological and Supramolecular Applications

Bile acid-based structures have become increasingly important in different fields of chemistry over recent years, having found applications in pharmacology, supramolecular chemistry and nanoscience. Some interesting studies concerning these applications are reviewed, together with the latest developments in synthetic and analytical methods for bile acid-derived frameworks. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2004)

E-2-Benzylidenebenzocycloalkanones III. Studies on transmission of substituent effects on IR carbonyl stretching frequencies and 13C NMR chemical shifts of E-2-(X-benzylidene)-1-indanones. Comparison with the IR data of E-2-(X-benzylidene)-1-indanones, -tetralones, and -benzosuberones

Abstract Single substituent parameter and dual substituent parameter analysis was applied to study transmission of substituent effects on IR carbonyl stretching frequencies of E -2-(X-benzylidene)-1-indanones ( 3 ), -tetralones ( 4 ), and -benzosuberones ( 5 ). Similar analyses were performed for selected 13 C NMR chemical shifts of some E -2-(X-benzylidene)-1-indanones ( 3 ). For a better understanding of the results semiempirical and ab initio quantum chemical calculations were performed to determine the preferred geometry and to calculate the theoretical 13 C NMR chemical shifts of the selected compounds ( 3 ). The differences among the regression coefficients were discussed in terms of …

Multinuclear magnetic resonance, electrospray ionization time-of-flight mass spectral and molecular modelling characterization of lithocholic acid amide esters with various nitrogen heterocycles

1H, 13C and 15N NMR and electrospray ionization time-of-flight mass spectrometric characterizations of five lithocholate esters of piperazine diamides are described. Two of them are cholaphane-type cyclic structures esterified with 2,2′-bipyridine-4,4 ′ - and pyridine-2,6-dicarboxylic acid and the other three esters are open structures comprising two or four lithocholyl residues. The conformational preferences of the dimeric congeners were examined by using molecular modelling and variable-temperature 1H NMR techniques. Copyright © 2003 John Wiley & Sons, Ltd.

Corrigendum to “Comparison of epimeric methyl lithocholate and methyl iso-lithocholate molecules: Single crystal X-ray structure of methyl lithocholate, ab initio HF/6-31G* optimized structures and experimental and calculated DFT/B3LYP 13C NMR chemical shifts” [J. Molstruc. 649 (2003) 207–218]

Bile acid amidoalcohols: simple organogelators.

Simple bile acid amide synthesis of lithocholic and deoxycholic acids with 2-aminoethanol and 3-aminopropanol are reported. The structural properties of these amides were examined by NMR spectroscopic, ESI-TOF mass spectral, and X-ray crystallographic methods. The gelation properties of these amides in common organic solvents and in three different water solutions were also investigated using Tyndall effect, SEM, TEM, and optical microscopy. 2-Hydroxyethylamides were found to be effective gelators in chlorinated organic solvents and 3-hydroxypropylamides in aromatic solvents. Both derivatives thicken neutral and acidic water solutions.

Structural characterization of β-2′-pyridylaminocrotonoyl-2-pyridylamide by ESI-MS, NMR, single crystal X-ray analysis and ab initio methods

Abstract In contradiction with earlier reports 1H, 13C and 15N NMR spectra show that β-2′-pyridylaminocrotonoyl-2-pyridylamide is the only form present in chloroform solution. According to the X-ray data the same tautomer exists also in the crystal state. The studied amide has a dimeric form where the monomer molecules are held together by two intermolecular hydrogen bonds. The NMR spectral data show that there is also an intramolecular hydrogen bond in each monomer subunit. The dilution experiments and variable-temperature 1H NMR runs show that β-2′-pyridylaminocrotonoyl-2-pyridylamide tends to form the dimers also in chloroform solution at higher concentrations. The ESI-TOF MS measurement…

Comparison of calculated DFT/B3LYP and experimental 13C and 17O NMR chemical shifts, ab initio HF/6-31G* optimised structures, and single crystal X-ray structures of some substituted methyl 5β-cholan-24-oates

Abstract Single crystal X-ray structures (monoclinic space group P2 1 ) for methyl 3-oxo-5β-cholan-24-oate and methyl 3,12-dioxo-5β-cholan-24-oate have been solved and compared with HF/6-31G* optimised structures. In the crystalline packings the side chains are connected with weak OC(sp 3 ) H ⋯ O -type of interactions between C25– H and C24– O –C25 and the keto ends with weak C(sp 3 ) H ⋯ O C-type of interactions between C4– H and O C3. The orientations of the side chains, which steric configurations are of great importance to the biological activity of the molecules, are compared with the experimental structure of methyl 3α-hydroxy-5β-cholan-24-oate. Probable reasons for the observed dif…

Macrocycles prepared from lithocholic acid, piperazine and isomeric pyridine dicarboxylic acids and their selective affinities towards sodium and potassium

Abstract Two novel macrocycles prepared from lithocholic acid, piperazine and pyridine dicarboxylic acids (2,6- and 3,5-isomers), have been characterized by 13C NMR and ESI–MS techniques. In case of the pyridine-2,6-dicarboxylate derivative, the molecular formula of the cycle was C59H87O6N3 (I), while the pyridine-3,5-dicarboxylate derivative (II) was a trimeric structure by molecular mass when compared with I. Furthermore, cycle I showed a special affinity towards potassium cation, while II possessed significant proton and sodium cation recognition properties.

Comparison of epimeric methyl lithocholate and methyl iso-lithocholate molecules: single crystal X-ray structure of methyl lithocholate, ab initio HF/6-31G* optimized structures and experimental and calculated DFT/B3LYP 13C NMR chemical shifts

Abstract 13 C NMR chemical shifts have been measured and assigned for epimeric methyl 3α/β-hydroxy-5β-cholan-24-oates (methyl lithocholate [3α-OH epimer] and methyl iso-lithocholate [3β-OH epimer]). Their molecular dynamics simulations suggest that for both epimers there exists two predominant gas phase conformations, which have been further forwarded for ab initio/HF optimizations and DFT/GIAO based 13 C NMR chemical shift calculations. Excellent linear relationships have been observed between experimental and calculated 13 C NMR chemical shifts for both epimers. For methyl lithocholate (MeLC), the other minimum energy conformation equates very well with the single crystal X-ray structure …

E-2-Benzylidenebenzocycloalkanones. IV. Studies on transmission of substituent effects on 13C NMR chemical shifts of E-2-(X-benzylidene)-1-tetralones, and -benzosuberones. Comparison with the 13C NMR data of chalcones and E-2-(X-benzylidene)-1-indanones

Abstract Single substituent parameter (SSP) and dual substituent parameter (DSP) analyses were applied to study the transmission of substituent effects on selected 13C NMR chemical shifts of the cyclic chalcone analogues, E-2-(4′-X-benzylidene)-1-tetralones (2) and E-2-(4′-X-benzylidene)-1-benzosuberones (3). In order to study how the geometry of the cyclic chalcone analogues affects the transmission of substituent effects similar investigations with the respective chalcones (4) were also performed. The results obtained earlier with the five-membered analogue E-2-(4′-X-benzylidene)-1-indanones (1) were also involved in the comparisons. Geometry optimization of the unsubstituted 1a, 2a, 3a a…

1H,13C and15N NMR spectroscopic, x-ray structural andab initio/HF studies on nitramino andN-alkylamino-4-nitro derivatives of pyridineN-oxides and pyridines

The 1H, 13C and 15N NMR spectra in DMSO-d6 were measured for eight nitraminopyridine N-oxides, ten 4-nitropyridine N-oxides, four 2-nitraminopyridines and five 4-nitropyridines. Their chemical shift assignments are based on PFG 1H,X (X = 13C and 15N) HMQC and HMBC experiments. The relative energies for the tautomers of two nitraminopyridine N-oxides were determined by ab initio HF/6–311G** calculations. A single-crystal x-ray structural analysis was made for 4-methyl-2-nitraminopyridine: C6H7O2N3, M = 153.15, triclinic, space group P-1 (No. 2), a = 7.0275(4), b = 6.8034(3), c = 8.6086(5) A, α = 103.620(2), β = 90.309(2), γ = 122.215(3)°, V = 334.11(3) A3, Z = 2. Copyright © 2003 John Wiley …

1H-, 13C-, and 15N-NMR and ESI-TOF+ MS studies of a supramolecular complex of silver(I) and a cholaphane

A novel application of the mixed anhydride procedure for synthesising lithocholic acid piperazine diamide, an important intermediate in designing bile acid-based supramolecular host molecules, is reported. The synthesis of a thiophene-containing cholaphane with transition metal complexation ability and 1H-, 13C-, and 15N-NMR as well as ESI-TOF+ MS spectral characterisation of the ligand and its Ag(I) complex are included. The coordination of the Ag(I) ion as well as an ability of the cholaphane to recognise Ag(I) ion over alkali metal ions, especially potassium ion, is discussed. The possible medical applications are also presented.