0000000000413475

AUTHOR

José Antonio Navarro

showing 3 related works from this author

Highly efficient construction of infectious viroid-derived clones

2019

[Background] Viroid research generally relies on infectious cDNA clones that consist of dimers of the entire viroid sequence. At present, those dimers are generated by self-ligation of monomeric cDNA, a strategy that presents several disadvantages: (i) low efficiency, (ii) it is a non-oriented reaction requiring tedious screenings and (iii) additional steps are required for cloning into a binary vector for agroinfiltration or for in vitro RNA production.

0106 biological sciences0301 basic medicineAgroinfiltrationIIs enzymesViroidvirusesPlant ScienceComputational biologylcsh:Plant cultureBiology01 natural sciences03 medical and health sciencesAgro-infiltrationComplementary DNAGeneticsLethal allelelcsh:SB1-1110Vector (molecular biology)Dimerslcsh:QH301-705.5CloningViroidMethodologyRNAbiology.organism_classificationRestriction enzyme030104 developmental biologylcsh:Biology (General)010606 plant biology & botanyBiotechnologyCloning
researchProduct

RNA-binding properties and membrane insertion of Melon necrotic spot virus (MNSV) double gene block movement proteins

2006

AbstractAdvances in structural and biochemical properties of carmovirus movement proteins (MPs) have only been obtained in p7 and p9 from Carnation mottle virus (CarMV). Alignment of carmovirus MPs revealed a low conservation of amino acid identity but interestingly, similarity was elevated in regions associated with the functional secondary structure elements reported for CarMV which were conserved in all studied proteins. Nevertheless, some differential features in relation with CarMV MPs were identified in those from Melon necrotic virus (MNSV) (p7A and p7B). p7A was a soluble non-sequence specific RNA-binding protein, but unlike CarMV p7, its central region alone could not account for t…

Molecular Sequence DataSequence alignmentBiologyMembranes (Biologia)VirologyAmino Acid SequencePeptide sequenceProtein secondary structureIntegral membrane proteinPlant DiseasesMelon necrotic spot virusCarmovirusProteïnes de membranaRNA-Binding ProteinsRNAbiology.organism_classificationRNA-binding domainVirusPlant Viral Movement ProteinsCucurbitaceaeMovement proteinsBiochemistryCarnation mottle virusMelon plantsCarmovirusMNSVMembrane insertionSequence AlignmentGene DeletionVirology
researchProduct

Might exogenous circular RNAs act as protein-coding transcripts in plants?

2021

Circular RNAs (circRNAs) are regulatory molecules involved in the modulation of gene expression. Although originally assumed as non-coding RNAs, recent studies have evidenced that animal circRNAs can act as translatable transcripts. The study of plant-circRNAs is incipient, and no autonomous coding plant-circRNA has been described yet. Viroids are the smallest plant-pathogenic circRNAs known to date. Since their discovery 50 years ago, viroids have been considered valuable systems for the study of the structure-function relationships in RNA, essentially because they have not been shown to have coding capacity. We used two pathogenic circRNAs (Hop stunt viroid and Eggplant latent viroid) as …

Protein codingViroid-derived peptidesPlant coding circRNAsvirusesfood and beveragesRNA CircularCell BiologyPlantsBiologyVirus ReplicationPlant pathogenic RNAsViroidsPlant VirusesRegulatory moleculesCell biologyNon canonical transcriptsGene expressionRNA ViralSolanum melongenaPoint of ViewMolecular BiologyCircular RNAsPlant DiseasesArticle Commentary
researchProduct