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RESEARCH PRODUCT
DVWA gene polymorphisms and osteoarthritis
Valentina Bravatà 1*Luigi Minafra 1*Giusi I Forte 1Francesco Paolo CammarataMichele Saporito 2Filippo Boniforti 3Domenico Lio 4Maria C Gilardi 156Cristina Messa 167subject
MaleLinkage disequilibriumShort ReportSingle-nucleotide polymorphismOsteoarthritisCollagen Type VIBioinformaticsPolymorphism Single NucleotideGeneral Biochemistry Genetics and Molecular BiologyLinkage DisequilibriumWhite PeopleGene FrequencyOsteoarthritisHaplotypeGenetic predispositionDVWAMedicineSNPHumansGenetic Predisposition to DiseaseAlleleOsteoarthritis DVWA Single nucleotide polymorphisms Haplotypes KLAllele frequencySicilyAllelesAgedMedicine(all)Aged 80 and overBiochemistry Genetics and Molecular Biology(all)business.industryHaplotypeHomozygoteGeneral MedicineSingle nucleotide polymorphismsMiddle AgedOsteoarthritis Kneemedicine.diseaseSingle nucleotide polymorphismKLHaplotypesOsteoarthritiFemalebusinessPseudogenesdescription
Background: Osteoarthritis (OA) is a degenerative joints disorder influenced by genetic predisposition. We reported that rs11718863 DVWA SNP was represented in Sicilian with a more severe Kellgren and Lawrence (KL) radiographic grade, displaying its predictive role as OA marker progression. Here, we describe the DVWA SNPs: rs11718863, rs7639618, rs7651842, rs7639807 and rs17040821 probably able to induce protein functional changes. Findings: Sixty-one Sicilian patients with knee OA and 100 healthy subjects were enrolled. Clinical and radiographic evaluation was performed using AKSS scores and KL. Linkage Disequilibrium (LD) analyses were performed in order to verify whether the SNPs segregate as haplotype. All DVWA SNPs'MinorAllele Frequencies (MAF) were greater than in the European. The rs7639618 SNP showed a statistical association with KL. Our analyses show that a LD exists among rs11718863 and rs7639618, as well as between rs7651842, rs7639807 and rs17040821 SNPs. We also observed that three out of the 161 individuals investigated were simultaneously homozygous carriers of the rs7651842, rs7639807 and rs17040821 MAF alleles. Conclusions: In summary, the purpose of this preliminary research was to highlight possible associations between DVWA SNPs and OA clinical and radiographic data. This work represents a multidisciplinary medicine approach to study OA where clinical, radiological and genetic evaluation could contribute to better define OA grading.
year | journal | country | edition | language |
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2015-02-01 | BMC Research Notes |