Search results for " Medicinal"

showing 10 items of 590 documents

Interaction between flavour compounds and beta-lactoglobulin: approach by NMR and 2D/3D-QSAR studies of ligands

2004

 author cannot archive publisher's version/PDF; International audience; Interactions between flavour compounds and beta-lactoglobulin (BLG) have been the subject of several studies, but there are no unanimous binding site explanations. In our laboratory, interactions between BLG, and two flavour compounds, beta-ionone and gamma-decalactone, were studied by 2D-NMR spectroscopy. It appears that several amino acids affected by binding of gamma-decalactone are buried in the central cavity, whereas binding of beta-ionone affects amino acids located in a groove near the outer surface of the protein. 2D/3D-QSAR studies were performed using QSAR+ module of Cerius2 and Catalyst. The QSAR equation pr…

Quantitative structure–activity relationshipAROMAMolecular modelStereochemistry01 natural sciences03 medical and health sciencesComputational chemistryMolecular descriptor[SDV.IDA]Life Sciences [q-bio]/Food engineeringFLAVOURBinding site030304 developmental biology3D-QSAR0303 health sciencesChemistryHydrogen bondLigand[ SDV.IDA ] Life Sciences [q-bio]/Food engineeringGeneral Chemistry[SDV.IDA] Life Sciences [q-bio]/Food engineeringAffinitiesBETA-LACTOGLOBULIN0104 chemical sciences010404 medicinal & biomolecular chemistry2D-QSAR2D-NMRTwo-dimensional nuclear magnetic resonance spectroscopyFood Science
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Machine learning-based models to predict modes of toxic action of phenols to Tetrahymena pyriformis.

2017

The phenols are structurally heterogeneous pollutants and they present a variety of modes of toxic action (MOA), including polar narcotics, weak acid respiratory uncouplers, pro-electrophiles, and soft electrophiles. Because it is often difficult to determine correctly the mechanism of action of a compound, quantitative structure-activity relationship (QSAR) methods, which have proved their interest in toxicity prediction, can be used. In this work, several QSAR models for the prediction of MOA of 221 phenols to the ciliated protozoan Tetrahymena pyriformis, using Chemistry Development Kit descriptors, are reported. Four machine learning techniques (ML), k-nearest neighbours, support vector…

Quantitative structure–activity relationshipAntiprotozoal AgentsQuantitative Structure-Activity RelationshipBioengineeringModes of toxic action010501 environmental sciencesMachine learningcomputer.software_genre01 natural sciencesMachine Learningchemistry.chemical_compoundPhenolsMolecular descriptorDrug DiscoveryPhenols0105 earth and related environmental sciencesCiliated protozoanArtificial neural networkbusiness.industryTetrahymena pyriformisGeneral Medicine0104 chemical sciencesSupport vector machine010404 medicinal & biomolecular chemistrychemistryTetrahymena pyriformisMolecular MedicineArtificial intelligenceNeural Networks ComputerbusinesscomputerSAR and QSAR in environmental research
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Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones

2021

Based on a set of six vector properties, the partial correlation diagram is calculated for a set of 28 S-alkylcysteine diazomethyl- and chloromethyl-ketone derivatives. Those with the greatest antileukemic activity in the same class correspond to high partial correlations. A periodic classification is performed based on information entropy. The first four characteristics denote the group, and the last two indicate the period. Compounds in the same period and, especially, group present similar properties. The most active substances are situated at the bottom right. Nine classes are distinguished. The principal component analysis of the homologous compounds shows five subclasses included in t…

Quantitative structure–activity relationshipLogarithmStereochemistryprincipal component analysisLymphoblastic LeukemiaPharmaceutical Science01 natural sciencesAnalytical Chemistrylcsh:QD241-44103 medical and health sciences0302 clinical medicinelcsh:Organic chemistryGroup (periodic table)Drug DiscoveryPhysical and Theoretical ChemistryPartial correlationperiodic classificationChemistrypartial correlation diagramOrganic ChemistryDiagraminformation entropy0104 chemical sciences010404 medicinal & biomolecular chemistryChemistry (miscellaneous)030220 oncology & carcinogenesisPrincipal component analysisLipinski's rule of fiveMolecular MedicineMolecules
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Prospective computational design and in vitro bio-analytical tests of new chemical entities as potential selective CYP17A1 lyase inhibitors

2019

[EN] The development and advancement of prostate cancer (PCa) into stage 4, where it metastasize, is a major problem mostly in elder males. The growth of PCa cells is stirred up by androgens and androgen receptor (AR). Therefore, therapeutic strategies such as blocking androgens synthesis and inhibiting AR binding have been explored in recent years. However, recently approved drugs (or in clinical phase) failed in improving the expected survival rates for this metastatic-castration resistant prostate cancer (mCRPC) patients. The selective CYP17A1 inhibition of 17,20-lyase route has emerged as a novel strategy. Such inhibition blocks the production of androgens everywhere they are found in t…

Quantitative structure–activity relationshipStereochemistry01 natural sciencesBiochemistryStructure-Activity Relationship3D-QSAR pharmacophore modelDrug DiscoveryCytochrome P-450 Enzyme InhibitorsHumansStructure–activity relationshipCYP17A1 InhibitorMolecular BiologyDensity Functional TheoryVirtual screeningDose-Response Relationship DrugMolecular Structure010405 organic chemistryChemistryOrganic ChemistryProspective computational designSteroid 17-alpha-Hydroxylasecomputer.file_format1720-lyase selective inhibitionProtein Data BankLyase0104 chemical sciencesMolecular Docking Simulation010404 medicinal & biomolecular chemistryDocking (molecular)CYP17A1 inhibitorsMetastatic-castration resistant prostate cancerPharmacophorecomputer
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Mechanisms of interference of p-diphenols with the Trinder reaction

2020

p-Diphenols, such as homogentisic acid, gentisic acid, etamsylate, and calcium dobesilate, interfere with diagnostic tests utilizing the Trinder reaction but the mechanisms of these effects are not fully understood. We observed substantial differences both in oxidation of p-diphenols by horseradish peroxidase and their influence on oxidation of 4-aminoantipyrine and various phenolic substrates. Homogentisic acid was rapidly oxidized by the enzyme and completely blocked chromophore formation. Enzymatic oxidation of the remaining p-diphenols was slow and they only moderately inhibited chromophore formation. However, in the presence of standard substrates all tested p-diphenols were rapidly co…

RadicalSubstituentElectronsPhotochemistry01 natural sciencesBiochemistryRedoxHorseradish peroxidaseHomogentisic acidchemistry.chemical_compoundGentisic acidPhenolsDrug DiscoveryBenzoquinonesHomogentisic acidGentisic acidEnzymatic assay interferenceHydrogen peroxideMolecular BiologyHorseradish PeroxidaseCalcium dobesilatebiology010405 organic chemistryOrganic ChemistryHydrogen PeroxideChromophoreEtamsylate0104 chemical sciencesAmpyrone010404 medicinal & biomolecular chemistrychemistrySpectrophotometrybiology.proteinOxidation-ReductionTrinder reactionBioorganic Chemistry
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68 Ga‐Labelled Tropane Analogues for the Visualization of the Dopaminergic System

2020

Abstract The development of radiometal‐labelled pharmaceuticals for neuroimaging could offer great potential due to easier handling during labelling and availability through radionuclide generator systems. Nonetheless, to date, no such tracers are available for positron emission tomography, primarily owing to the challenge of crossing the blood–brain barrier (BBB) and loss of affinity through chelator attachment. We have prepared a variety of 68Ga‐labelled phenyltropanes showing that, through a simple hydrocarbon‐linker, it is possible to introduce a chelator onto the lead structure while maintaining its high affinity for hDAT (human dopamine transporter) and simultaneously achieving adequa…

Rat modeltropane01 natural sciencesBiochemistrychemistry.chemical_compoundgallium-68Drug DiscoverylipophilicitymedicineGeneral Pharmacology Toxicology and PharmaceuticsradiopharmaceuticalsDopamine transporterPharmacologyFull Paperbiologymedicine.diagnostic_test010405 organic chemistryChemistryOrganic ChemistryDopaminergicdopamine transportersTropaneFull Papers0104 chemical sciencesimaging agents010404 medicinal & biomolecular chemistryPositron emission tomographyLipophilicityLead structurebiology.proteinBiophysicsMolecular MedicineRadionuclide GeneratorChemMedChem
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Hydroquinone: O-glucosyltransferase from cultivated Rauvolfia cells: enrichment and partial amino acid sequences.

2000

Plant cell suspension cultures of Rauvolfia are able to produce a high amount of arbutin by glucosylation of exogenously added hydroquinone. A four step purification procedure using anion exchange, hydrophobic interaction, hydroxyapatite-chromatography and chromatofocusing delivered in a yield of 0.5%, an approximately 390 fold enrichment of the involved glucosyltransferase. SDS-PAGE showed a M(r) for the enzyme of 52 kDa. Proteolysis of the pure enzyme with endoproteinase LysC revealed six peptide fragments with 9-23 amino acids which were sequenced. Sequence alignment of the six peptides showed high homologies to glycosyltransferases from other higher plants.

RauvolfiaStereochemistryMolecular Sequence DataPeptidePlant ScienceHorticultureBiochemistryRauwolfiachemistry.chemical_compoundRauvolfia serpentinaAmino Acid SequenceMolecular BiologyCells Culturedchemistry.chemical_classificationChromatographyPlants MedicinalbiologyChromatofocusingArbutinGeneral Medicinebiology.organism_classificationChromatography Ion ExchangePeptide FragmentsAmino acidMolecular WeightKineticsEnzymeDurapatitechemistryBiochemistryGlucosyltransferasesbiology.proteinGlucosyltransferaseElectrophoresis Polyacrylamide GelPhytochemistry
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Site specificity of pea histone acetyltransferase B in vitro.

1993

Histone acetyltransferase B from pea embryonic axes has been purified approximately 300-fold by a combination of chromatographic procedures, including affinity chromatography on histone-agarose. The enzyme preparation has been used for the in vitro transfer of acetyl groups from [1-14C]acetyl-CoA to non-acetylated pea histone H4. Up to three acetyl groups can be introduced into the histone. The resulting mono-, di-, and triacetylated H4 isoforms were separated and sequenced to determine the acetylated sites. Only sites 5, 12, and 16 were used by histone acetyltransferase B, but no clear preference among them was observed. The absence of modification of other potentially acetylatable sites i…

Saccharomyces cerevisiae ProteinsLysineMolecular Sequence DataBiochemistryChromatography AffinitySubstrate SpecificityHistone H4HistonesAffinity chromatographyAcetyltransferasesHistone octamerAmino Acid SequenceMolecular BiologyHistone AcetyltransferasesPlants MedicinalbiologyAcetylationFabaceaeCell BiologyHistone acetyltransferaseMolecular biologyIsoenzymesHistoneBiochemistryAcetylationHistone methyltransferasebiology.proteinElectrophoresis Polyacrylamide GelThe Journal of biological chemistry
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Cytotoxic Acacic Acid Glycosides from the Roots of Albizia coriaria

2009

Two new oleanane-type saponins, coriariosides A (1) and B (2), along with a known saponin, gummiferaoside C (3), were isolated from the roots of Albizia coriaria. Their structures were established by extensive analysis of 1D and 2D NMR experiments (COSY, ROESY, TOCSY, HSQC, and HMBC) and mass spectrometry. Compounds 1 and 3 when tested for cytotoxicity against two colorectal human cancer cells showed activity against the HCT 116 (IC50 4.2 microM for 1 and 2.7 microM for 3) and HT-29 (IC50 6.7 microM for 1 and 7.9 microM for 3) cell lines.

SaponinPharmaceutical ScienceAlbizziaPharmacognosyPlant RootsAnalytical ChemistryTriterpeneCoriariaDrug DiscoveryBotanyHumansCameroonOleanolic AcidMedicinal plantsNuclear Magnetic Resonance BiomolecularPharmacologychemistry.chemical_classificationPlants MedicinalMolecular StructurebiologyOrganic ChemistryGlycosideSaponinsHCT116 Cellsbiology.organism_classificationAlbiziaAntineoplastic Agents PhytogenicTriterpenesTerpenoidComplementary and alternative medicinechemistryMolecular MedicineDrug Screening Assays AntitumorHT29 CellsJournal of Natural Products
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New Acylated Triterpene Saponins from Silene fortunei that Modulate Lymphocyte Proliferation

2002

Three new acylated triterpene saponins 1-3, with a quillaic acid as aglycon, were isolated from the roots of Silene fortunei together with a known phytoecdysteroid (20-hydroxyecdysone). The compounds were characterized mainly by a combination of 2D NMR techniques, mass spectrometry, and chemical methods. Saponins 1-3, jenisseensosides C and D (4, 5), and 6 (deacylated form of 2/3 and 4/5) were found to stimulate the proliferation of the Jurkat tumor cell lines at low concentration. At high concentration, 2/3 and 4/5 inhibited the proliferation of the cells and suggested the induction of apoptosis.

SaponinPhytoecdysteroidPharmaceutical ScienceApoptosisLymphocyte proliferationPharmacognosyLymphocyte ActivationPlant RootsJurkat cellsAnalytical ChemistryJurkat CellsTriterpeneDrug DiscoveryHumansSileneNuclear Magnetic Resonance BiomolecularPharmacologychemistry.chemical_classificationSilenePlants MedicinalMolecular StructurebiologyHydrolysisOrganic ChemistryGlycosideAcetylationStereoisomerismSaponinsbiology.organism_classificationTriterpenesComplementary and alternative medicinechemistryBiochemistryMolecular MedicineJournal of Natural Products
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