Search results for " RNA"

showing 10 items of 1405 documents

Development of a specific assay using RISA for detection of the bacterial agent of 'basses richesses' syndrome of sugar beet and confirmation of a Pe…

2007

International audience; A technique for the specific diagnosis in insects of SBRp (the γ-3 proteobacterium associated with the syndrome ‘basses richesses’ (SBR) of sugar beet crops in eastern France), using the RISA (rDNA intergenic spacer analysis) technique, was developed. PCR using the Alb1/Oliv1 primer pair specifically amplified a 16S-ITS region of SBRp and produced a characteristic DNA fingerprint. This PCR assay did not detect other closely related organisms, including the Arsenophonus endosymbiont of Diaphorina citri, the secondary endosymbiont of Glycaspis brimblecombei, or ‘Candidatus Phlomobacter fragariae’, a related phytopathogenic γ-3 proteobacterium. Six different ribosomal o…

Diaphorina citri[SDV]Life Sciences [q-bio]Plant ScienceHorticultureMicrobiologylaw.invention03 medical and health scienceslawGeneticsCicadomorphaPolymerase chain reaction030304 developmental biology0303 health sciencesbiology030306 microbiologyfungiRIBOSOMAL OPERONRibosomal RNAbiology.organism_classificationCixiidaeDNA profilingPhytoplasmaSTOLBUR PHYTOPLASMAPROTEOBACTERIAINSECT VECTORSSugar beetAgronomy and Crop Science
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Unusual Assortment of Segments in 2 Rare Human Rotavirus Genomes

2010

Using full-length genome sequence analysis, we investigated 2 rare G3P[9] human rotavirus strains isolated from children with diarrhea. The genomes were recognized as assortments of genes closely related to rotaviruses originating from cats, ruminants, and humans. Results suggest multiple transmissions of genes from animal to human strains of rotaviruses.

DiarrheaMicrobiology (medical)Settore MED/07 - Microbiologia E Microbiologia ClinicaSettore MED/17 - Malattie InfettiveEpidemiologySequence analysisvirusesMolecular Sequence DataReassortmentlcsh:Medicineinterspecies transmissionGenome ViralBiologymedicine.disease_causeGenomeRotavirus Infectionslcsh:Infectious and parasitic diseasesfluids and secretionsPhylogeneticsRotavirusfull genome sequencingmedicineG3P[9]Humanslcsh:RC109-216GeneGenotypingPhylogenyWhole genome sequencingGeneticsSequence Analysis RNAlcsh:RDispatchvirus diseasesVirologyGastroenteritiszoonosesInfectious Diseasesrotavirushuman rotavirugenotypingChild PreschoolVirusesRNA ViralreassortmentgenomesSequence AlignmentEmerging Infectious Diseases
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Novel group A rotavirus G8 P[1] as primary cause of an ovine diarrheic syndrome outbreak in weaned lambs

2011

International audience; Rotavirus is a worldwide major cause of diarrhea outbreaks in neonatal ruminants. An outbreak of ovine diarrheic syndrome (ODS) in 50-75 days-old lambs (weaned lambs) is described. Fecal immunochromatography and intestinal immunohistochemistry for rotavirus group A were performed. In addition, semi-nested multiplex RT-PCR for G and P rotavirus genotyping in combination with sequencing were performed, to support the diagnosis and identify the viral strain. A novel ovine rotavirus group A G8 P[1] strain was determined as the main cause of the ODS observed, whereas other pathogens were ruled out.

DiarrheaRotavirusGenotypevirusesSheep DiseasesWeaningBiologymedicine.disease_causePolymerase Chain ReactionMicrobiologyGroup AChromatography AffinityRotavirus InfectionsDisease OutbreaksFeces03 medical and health sciencesOvine rotavirusfluids and secretionsRotavirusmedicineAnimalsOvine diarrheic syndromeGenotypingSheep DomesticFeces030304 developmental biology0303 health sciences[SDV.BA.MVSA]Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal HealthSheepGeneral VeterinarySequence Analysis RNA030306 microbiologyOutbreakGeneral MedicineImmunohistochemistryVirology3. Good healthweaned lambsDiarrheaSpainRNA Viralrotavirus group Amedicine.symptomVeterinary Microbiology
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Heterogeneity in the Response of Different Subtypes of Drosophila melanogaster Midgut Cells to Viral Infections

2021

This article belongs to the Section Viral Immunology, Vaccines, and Antivirals.

Drosophila virusesSingle-cell genomicsvirusesVirus-host interactionMicrobiologyViruscell-type-specific gene expressionTranscriptomeVirologyMelanogasterHeat shockGeneSingle-cell RNA-seqsingle-cell RNA-seqvirus-host interactionbiologydual RNA-seqsingle-cell genomicsRNAbiology.organism_classificationVirologyQR1-502Infectious DiseasesViral replicationantiviral heat shock responseCell-type-specific gene expression<i>Drosophila</i> virusesDrosophila melanogasterDual RNA-seqViruses
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Inclisiran: a small interfering RNA strategy targeting PCSK9 to treat hypercholesterolemia

2022

Introduction: Inclisiran is a novel posttranscriptional gene silencing therapy that inhibits proprotein convertase subtilisin/kexin type 9 (PCSK9) synthesis by RNA interference and has a potent, dose-dependent, durable effect in lowering LDL-C, and therefore is an effective drug to treat dyslipidemia, reducing the risk for acute cardiovascular (CV) events. It is safe and well-tolerated. Areas covered: This paper aims to review the mechanism of action of inclisiran while evaluating its efficacy and safety in the treatment of dyslipidemia from data of the clinical trials in the ORION program. Expert opinion: Data from the clinical trials in the ORION program demonstrated efficacy and safety o…

DrugSmall interfering RNAmedia_common.quotation_subjectHypercholesterolemiaPlaceboBioinformaticsLDLPCSK9RNA interferencemedicineAnimalsHumansPharmacology (medical)Gene SilencingRNA Small InterferingAdverse effectDyslipidemiasmedia_commontherapy.business.industryPCSK9General Medicinemedicine.diseaseClinical trialCardiovascular DiseasesAtherosclerosis inclisiran LDL PCSK9 RNA therapy Animals Cardiovascular Diseases Dyslipidemias Gene Silencing Humans Hypercholesterolemia Proprotein Convertase 9 RNA Small InterferingAtherosclerosiRNAProprotein Convertase 9businessinclisiranDyslipidemiaExpert Opinion on Drug Safety
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Toward a Rationale for the PTC124 (Ataluren) Promoted Readthrough of Premature Stop Codons: A Computational Approach and GFP-Reporter Cell-Based Assay

2014

The presence in the mRNA of premature stop codons (PTCs) results in protein truncation responsible for several inherited (genetic) diseases. A well-known example of these diseases is cystic fibrosis (CF), where approximately 10% (worldwide) of patients have nonsense mutations in the CF transmembrane regulator (CFTR) gene. PTC124 (3-(5-(2-fluorophenyl)-1,2,4-oxadiazol-3-yl)-benzoic acid), also known as Ataluren, is a small molecule that has been suggested to allow PTC readthrough even though its target has yet to be identified. In the lack of a general consensus about its mechanism of action, we experimentally tested the ability of PTC124 to promote the readthrough of premature termination c…

Duchenne muscular distrophy (DMD)Protein ConformationNonsense mutationBlotting WesternGreen Fluorescent ProteinsPharmaceutical ScienceCystic Fibrosis Transmembrane Conductance RegulatorSettore BIO/11 - Biologia MolecolareBiologyMolecular Dynamics Simulationmedicine.disease_causeReal-Time Polymerase Chain Reactionpremature termination codons (PTC)ArticleGreen fluorescent proteinchemistry.chemical_compoundDrug DiscoverymedicineCoding regionHumansRNA Messengermolecular dynamics (MD)GeneCells CulturedGeneticsnonsense mutation readthroughMessenger RNAMutationOxadiazolesReverse Transcriptase Polymerase Chain Reactiongreen fluorescent protein (GFP)atalurenSettore CHIM/06 - Chimica OrganicaStop codonAtalurenSettore BIO/18 - GeneticachemistryCodon NonsenseSettore CHIM/03 - Chimica Generale E InorganicaMutationCodon TerminatorMutagenesis Site-DirectedMolecular MedicineNucleic Acid Conformationcystic fibrosis (CF)oxadiazoleHeLa Cells
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Cytokinin affects nitrate reductase expression through the modulation of polyadenylation of the nitrate reductase mRNA transcript

1993

Abstract Cytokinin (CK) and low-intensity light effects in modulating nitrate reductase (NR) activity, NR protein and NR encoding mRNAs were studied in tobacco cell suspension cultures. NR activity was strikingly enhanced by CK in dark- as well as in light-grown cells whereas it was less affected by light alone. NR protein accumulation was stimulated by the hormone in the light only; then a CK light-dependent regulation of NR activity was suggested. Light enhanced the steady-state levels of hybridisable total NR mRNA and a light-inductive effect was also observed after transfer from dark to light; this effect was dependent on sucrose supply and was enhanced in CK-supplied cells. NR poly(A) …

EXPRESSION0106 biological sciencesPolyadenylationPlant ScienceBiologyNitrate reductase01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health scienceschemistry.chemical_compoundMRNA polyadenylation[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsGene expressionGeneticsComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesMessenger RNARNAGeneral MedicineMolecular biologyBiochemistrychemistryCell culturePMSFAgronomy and Crop Science010606 plant biology & botanyPlant Science
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What does Cryptocercus kyebangensis, n.sp. (Dictyoptera: Blattaria: Polyphagidae) from Korea reveal about Cryptocercus evolution? A study in morpholo…

2001

doi: 10.1635/0097-3157(2001)151[0061:WDCKNS]2.0.CO;2 0097-3157 doi: 10.1635/0097-3157(2001)151[0061:WDCKNS]2.0.CO;2; The description of a new species of the woodroach Cryptocercus kyebangensis Grandcolas from South Korea offers the opportunity to bring comparative information within the genus. This species, though morphologically very similar to other East Asian and North American species, presents conspicuous differentiation of both ribosomal genes (sequenced fragments of 12S and 16S) and chemical blends from tergal glands (proportions of linalyl acetate and the alcohol 4, 6, 8-trimethyl-7, 9-undecadien-5-ol, compounds previously identified in females originating from North America). A phy…

EcologybiologyBlattaDictyopteraZoologySpecies nova: Cryptocercus kyebangensis GrandcolasRibosomal RNAbiology.organism_classificationSpecies nova: Cryptocercus kyebangensis Grandcolas.GenusCryptocercusMolecular phylogeneticsVicarianceTherea petiverianaEcology Evolution Behavior and Systematics
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Phylogenetic reconstruction of the yeast genus Kluyveromyces: restriction map analysis of the 5.8S rRNA gene and the two ribosomal internal transcrib…

1998

Summary We have constructed restriction site maps of the 5.8S rRNA gene and the two ITS regions in 60 strains of Kluyveromyces genus. We test the value of this region as a phylogenetic indicator, and its possible use as a fast and easy method to identify species of this genus. Despite some minor incongruences, our results are in good agreement with previous phylogenetic reconstructions based on the 18S rRNA gene sequencing (Cai et al., 1996; James et al., 1997). A highly significant monophyletic group was formed by K. lactis, K. marxianus, K. aestuarii, K. dobzhanskii and K. wickerhamii, which should be considered the true Kluyveromyces genus. The other species of the genus were grouped wit…

Electrophoresis Agar GelGeneticsPhylogenetic treebiologyRestriction MappingRibosomal RNAbiology.organism_classificationDNA RibosomalPolymerase Chain ReactionApplied Microbiology and BiotechnologyMicrobiology18S ribosomal RNARNA Ribosomal 5.8SKluyveromycesRestriction siteRestriction mapPhylogeneticsKluyveromycesRibosomal DNAPhylogenyEcology Evolution Behavior and SystematicsDNA Primers
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Electropherotyping of human rotaviruses: An epidemiological survey of rotavirus infections in Sicily

1986

An electrophoretic analysis of rotavirus RNA segments was carried out on 522 faecal specimens, obtained from children hospitalized in Sicily in the period 1981/85. One hundred and one viral isolates could be characterized with respect to the electrophoretic pattern of their genomic RNAs. This analysis revealed that in 1981/82 different electropherotypes cocirculated in the infant population. In 1983 one of the patterns became prevalent; in 1984/85 only one electropherotype was detected, both in Palermo and Catania specimens. The serotyping showed that all viral strains with the prevalent electropherotype were subgroup II and serotype 1. These results contrast with the extensive genome varia…

ElectrophoresisRotavirusSerotypemedicine.medical_specialtyRotavirus RNAeducation.field_of_studyEpidemiologybusiness.industryPopulationInfantRotavirus Infectionsmedicine.disease_causeVirologyRotavirus InfectionsMicrobiologyChild PreschoolRotavirusEpidemiologyHumansRNA ViralMedicineChildbusinesseducationSicilyEuropean Journal of Epidemiology
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