Search results for " hybridization"

showing 10 items of 715 documents

Glucocorticoid receptor (DlGR1) is expressed in pre-larval and larval stages of the teleost fish Dicentrarchus labrax.

2008

Glucocorticoid hormone receptors (GR), members of the nuclear hormone receptor superfamily, are ligand-dependent transcription factors expressed in various tissues by binding to specific DNA sequences. Since glucocorticoids have a role in maintaining the homeostatic status in fish, we previously cloned and sequenced a GR (DlGR1) of adult Dicentrarchus labrax; we also showed mRNA expression (in situ hybridization) and tissue immunohistochemical localization of DlGR1 in several organs. This work has now been extended to the examination of the expression, tissue distribution, and cytolocalization of DlGR1 in larval developmental stages by similar methods to those used for the adult organs. The…

Fish ProteinsHistologySettore BIO/05 - ZoologiaGene ExpressionIn situ hybridizationGlucocorticoid receptorBiologyArticlePathology and Forensic MedicineGlucocorticoid receptorReceptors GlucocorticoidComplementary DNAGene expressionAnimalsDicentrarchus labrax (Teleostei)Larval development . Glucocorticoid receptor . In situ hybridization . Immunohistochemistry . Dicentrarchus labrax (TeleosteiReceptorPeptide sequenceRiboprobeCell BiologyMolecular biologyImmunohistochemistryNuclear receptorLarvaLarval developmentBassIn situ hybridizationCell and tissue research
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Nanog Regulates Primordial Germ Cell Migration Through Cxcr4b

2010

Abstract Gonadal development in vertebrates depends on the early determination of primordial germ cells (PGCs) and their correct migration to the sites where the gonads develop. Several genes have been implicated in PGC specification and migration in vertebrates. Additionally, some of the genes associated with pluripotency, such as Oct4 and Nanog, are expressed in PGCs and gonads, suggesting a role for these genes in maintaining pluripotency of the germ lineage, which may be considered the only cell type that perpetually maintains stemness properties. Here, we report that medaka Nanog (Ol-Nanog) is expressed in the developing PGCs. Depletion of Ol-Nanog protein causes aberrant migration of …

Fish ProteinsHomeobox protein NANOGChromatin ImmunoprecipitationReceptors CXCR4endocrine systemCell typeGenotypeOryziasBiologyNanogCxcr4bOpen Reading FramesCell MovementAnimalsPromoter Regions Genetic3' Untranslated RegionsGeneIn Situ Hybridizationreproductive and urinary physiologyHomeodomain ProteinsRegulation of gene expressionMessenger RNABinding SitesReverse Transcriptase Polymerase Chain Reactionurogenital systemThree prime untranslated regionPGCGene Expression Regulation DevelopmentalCell BiologyImmunohistochemistryPhenotypeMolecular biologyChemokine CXCL12MedakaGerm CellsPhenotypeGene Knockdown Techniquesembryonic structuresMolecular Medicinebiological phenomena cell phenomena and immunityChromatin immunoprecipitationDevelopmental BiologyStem Cells
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Nanog Regulates Proliferation During Early Fish Development

2009

Abstract Nanog is involved in controlling pluripotency and differentiation of stem cells in vitro. However, its function in vivo has been studied only in mouse embryos and various reports suggest that Nanog may not be required for the regulation of differentiation. To better understand endogenous Nanog function, more animal models should be introduced to complement the murine model. Here, we have identified the homolog of the mammalian Nanog gene in teleost fish and describe the endogenous expression of Ol-Nanog mRNA and protein during medaka (Oryzias latipes) embryonic development and in the adult gonads. Using medaka fish as a vertebrate model to study Nanog function, we demonstrate that …

Fish ProteinsHomeobox protein NANOGOryziasRex1ProliferationOryziasBiologyNanogPolymerase Chain ReactionGene expressionAnimalsRNA MessengerGonadsTranscription factorIn Situ Hybridizationreproductive and urinary physiologyCell ProliferationHomeodomain ProteinsRegulation of gene expressionCell CycleEmbryogenesisGene Expression Regulation DevelopmentalCell Biologybiology.organism_classificationImmunohistochemistryMolecular biologyMedakaDifferentiationembryonic structuresMolecular Medicinebiological phenomena cell phenomena and immunityStem cellDevelopmental BiologyStem Cells
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cDNA sequence and tissue expression of an antimicrobial peptide, dicentracin; a new component of the moronecidin family isolated from head kidney leu…

2007

A 483-bp cDNA was isolated from sea bass (Dicentrarchus labrax) head kidney leukocytes, dicentracin, using PCR primers designed from conserved moronecidin domains. Gene bank analysis revealed that dicentracin cDNA belongs to the moronecidin family. As deduced from alignment with Morone chrysops moronecidin, the precursor of 79 aa appeared to be composed of a signal peptide of 22 aa, followed by the mature AMP (antimicrobial peptide) of 22 aa named dicentracin, and a C-terminal extension of 35 aa. Dicentracin precursor displayed 3 aa substitutions with other moronecidin sequence but none in the mature peptide sequence. Using in situ hybridization assay, dicentracin gene expression was observ…

Fish ProteinsSignal peptideDNA ComplementaryPhysiologyMolecular Sequence DataIn situ hybridizationBiologyKidneyBiochemistryPeritoneal cavityComplementary DNAGene expressionLeukocytesmedicineAnimalsAmino Acid SequenceRNA MessengerCloning MolecularSea bassPeritoneal CavityMolecular BiologyPeptide sequencePhylogenyHead KidneyBase SequenceSequence Homology Amino AcidMolecular biologymedicine.anatomical_structureGene Expression RegulationBassAntimicrobial Cationic Peptides
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Expression of a glucocorticoid receptor (DlGR1) in several tissues of the teleost fish Dicentrarchus labrax

2008

Since glucocorticoids have a role in maintaining the homeostatic status in fish, in the present paper mRNA expression (in situ hybridization) and tissue immunohistochemical localization of a glucocorticoid receptor (DlGR1) in several Dicentrarchus labrax organs are reported. Riboprobe and specific antibodies were prepared by using the DlGR1 that has been previously cloned and sequenced from peritoneal cavity leukocytes. Both mRNA and receptor were identified in head kidney, spleen, gills, intestine, heart and liver tissues. The functional roles of DlGR1 localization are discussed.

Fish Proteinsmedicine.medical_specialtyBlotting WesternGene ExpressionSpleenIn situ hybridizationBiologyPeritoneal cavityReceptors GlucocorticoidGlucocorticoid receptorInternal medicinemedicineAnimalsRNA MessengerReceptorIn Situ HybridizationRiboprobeCell BiologyGeneral Medicinebiology.organism_classificationImmunohistochemistryMolecular biologymedicine.anatomical_structureEndocrinologyImmunohistochemistryBassDicentrarchusDevelopmental BiologyTissue and Cell
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Utilizzo della tecnica F.I.S.H. (Fluorescence In Situ Hybridization) per la localizzazione di batteri endogeni nel lievito Issatchenkia Terricola

2018

Precedenti indagini, rivolte alla valorizzazione ed alla diffusione di pratiche enologiche basate su un ridotto uso di coadiuvanti tecnologici attraverso l’impiego di fermentazione alcoliche spontanee gestite in modo da eliminare e/o ridurre l’uso delle colture microbiche commerciali su Aglianico di Taurasi (AV), hanno permesso di isolare da mosto in fermentazione colonie di lieviti che sono state successivamente purificate e conservate in ceppoteca. Analisi microscopiche condotte sugli isolati di lievito hanno messo in evidenza la presenza di batteri endogeni presenti all’interno delle cellule del lievito. L’obiettivo di questo studio è stato rivolto all’identificazione delle specie coinvo…

Fluorescence In Situ Hybridization Issatchenkia TerricolaSettore AGR/16 - Microbiologia Agraria
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Polarity factor 'Frizzled' in the demosponge Suberites domuncula: identification, expression and localization of the receptor in the epithelium/pinac…

2003

Until recently, it was assumed that polarity and axis formation have evolved only in metazoan phyla higher than Cnidaria. One key molecule involved in the signal transduction causing tissue polarity is Frizzled, a seven-transmembrane receptor that is activated by the Wnt family of secreted proteins. We report the isolation and characterization of a Frizzled gene from the demosponge Suberites domuncula (Sd-Fz). The deduced polypeptide comprises all characteristic domains known from Frizzled receptors of higher metazoans. In situ hybridization studies show that Sd-Fz is expressed in cells close to the surface of the sponges and in the pinacocytes of some canals. Northern blot analysis demonst…

FrizzledMolecular Sequence DataBiophysicsPinacodermReceptors Cell SurfaceBiochemistryEpitheliumDemospongeStructural BiologyGeneticsAnimalsNorthern blotAmino Acid SequenceMolecular BiologyIn Situ HybridizationPhylogenyCell AggregationbiologySequence Homology Amino AcidWnt signaling pathwayCell BiologyAnatomybiology.organism_classificationBlotting NorthernCell biologyPoriferaProtein Structure TertiaryUp-RegulationSuberites domunculaSpongeSignal transductionSignal TransductionFEBS letters
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Infection dynamics of two renal myxozoans in hatchery reared fry and juvenile Atlantic cod Gadus morhua L.

2010

SUMMARYIn order to study the infection dynamics of 2 renal myxozoans, Zschokkella hildae Auerbach, 1910 and Gadimyxa atlanticaKøie, Karlsbakk and Nylund, 2007 in cultured Atlantic cod, Gadus morhua L. aged 3–19 months, a specific single-round PCR assay and a double-label in situ hybridization protocol were developed. The results demonstrated that the 2 myxozoans show spatial separation of their development with regard to spore formation inside the renal tubules versus the collecting ducts and ureters, as well as temporal separation with Z. hildae proliferating and developing spores only once the G. atlantica infection decreases, despite the presence of both myxozoans in the smallest fry stu…

Gadimyxa atlanticaFishes ParasitesCompetitive BehaviorFishes DiseasesParasitic Diseases AnimalSpores Protozoandouble-label in situ hybridizationZoologyAquaculturehatchery rearedKidneyinnate and acquired immunityPolymerase Chain ReactionHost-Parasite InteractionsFish DiseasesZschokkella hildaeAnimalsGadusMyxozoaIn Situ HybridizationFish hatcheriesMyxozoabiologyHatchingEcologyAquatic animaldynamicsGadidaebiology.organism_classificationHatcherymixed infectionInfectious DiseasesPCRGadus morhuaAtlantic codGadimyxa atlanticaAnimal Science and ZoologyParasitologyAtlantic codcompetition
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Enhanced hybridization labeling signals in Southern blotted DNAs fractionated with voltage gradient gel electrophoresis.

1998

An enhancement of hybridization labeling signals is demonstrated in Southern blotted DNAs, fractionated by voltage gradient gel electrophoresis. This enhancement is due to a reduced thickness of each single nucleic acid band in the gel as a consequence of the gradient effect, corresponding to an increased concentration of DNA per unit area.

Gel electrophoresisElectrophoresis Agar GelChromatographyGel electrophoresis of nucleic acidsClinical BiochemistryVoltage gradientMembrane ProteinsNucleic Acid HybridizationDNAChemical FractionationBiochemistryAnalytical Chemistrychemistry.chemical_compoundBlotting SouthernchemistryMolecular-weight size markerSea UrchinsNucleic acidPulsed-field gel electrophoresisElectrochemistryAnimalsDNASouthern blotElectrophoresis
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A Comparative Study of Different Methods of Yeast Strain Characterization

1992

Summary An extensive survey of different methods of yeast strain identification (classical microbiological tests, whole-cell protein electrophoresis, chromosomal patterns, DNA hybridization and mitochondrial DNA restriction analysis) has been carried out in order to differentiate, with industrial purposes, strains present in the Alicante wine ecosystem. Only chromosomal patterns and mitochondrial DNA (mtDNA) restriction analysis show differences between strains. Both techniques are very complex to be used in bio technological industries. For this reason, we have developed a new, simple, unexpensive and rapid method based on mtDNA restriction analysis.

Gel electrophoresisGeneticsMitochondrial DNAbiologyDNA–DNA hybridizationSaccharomyces cerevisiaebiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyYeastRestriction fragmentYeast in winemakingRestriction mapbiology.proteinEcology Evolution Behavior and SystematicsSystematic and Applied Microbiology
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