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showing 10 items of 31650 documents

De novo genome assembly of the land snail Candidula unifasciata (Mollusca: Gastropoda)

2021

Abstract Among all molluscs, land snails are a scientifically and economically interesting group comprising edible species, alien species and agricultural pests. Yet, despite their high diversity, the number of genome drafts publicly available is still scarce. Here, we present the draft genome assembly of the land snail Candidula unifasciata, a widely distributed species along central Europe, belonging to the Geomitridae family, a highly diversified taxon in the Western-Palearctic region. We performed whole genome sequencing, assembly and annotation of an adult specimen based on PacBio and Oxford Nanopore long read sequences as well as Illumina data. A genome draft of about 1.29 Gb was gene…

0106 biological sciencesCandidula unifasciataAcademicSubjects/SCI01140AcademicSubjects/SCI00010repeatsPopulationSnailsSequence assemblySnailQH426-470de novo assemblyAcademicSubjects/SCI01180010603 evolutionary biology01 natural sciencesGenome03 medical and health sciencesbiology.animalland snailslong readsGeneticsAnimalseducationMolecular BiologyGeneGenetics (clinical)030304 developmental biologyWhole genome sequencingGeomitridaemolluscs0303 health scienceseducation.field_of_studyGenomebiologyLand snailMolecular Sequence AnnotationGenomicsSequence Analysis DNAbiology.organism_classificationGenome ReportannotationEvolutionary biologyAcademicSubjects/SCI00960G3: Genes|Genomes|Genetics
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Tamarix arborea var. arborea and Tamarix parviflora: Two species valued for their adaptability to stress conditions.

2016

The choice of stress resistant and highly adaptable species is a fundamental step for landscaping and ornamental purposes in arid and coastal environments such as those in the Mediterranean basin. The genus Tamarix L. includes about 90 species with a high endurance of adversity. We investigated the water relations and photosynthetic response of Tamarix arborea (Sieb. ex Ehrenb.) Bge. var. arborea and T. parviflora DC. growing in an urban environment. Both species showed no evidence of drought or salt stress in summer, and appeared to follow two strategies with T. arborea var. arborea investing in high carbon gain at the beginning of the summer, and then reducing photosynthetic activity at t…

0106 biological sciencesChlorophyllWater potential010501 environmental sciences01 natural sciencesMediterranean BasinGeneral Biochemistry Genetics and Molecular BiologyPhotosynthesiSpecies SpecificityTamarix parvifloraGenusStress PhysiologicalOrnamental plantBotanySettore BIO/04 - Fisiologia VegetaleSettore AGR/08 - Idraulica Agraria E Sistemazioni Idraulico-ForestaliTamaricaceaePhotosynthesis0105 earth and related environmental sciencesGeneral Environmental ScienceTranspirationBiochemistry Genetics and Molecular Biology (all)biology2300TamaricaceaeTamariskMedicine (all)Settore BIO/02 - Botanica SistematicaTamarixWaterPlant Transpirationbiology.organism_classificationAridAdaptation PhysiologicalNeurologySettore BIO/03 - Botanica Ambientale E ApplicataDrought stre010606 plant biology & botanyActa biologica Hungarica
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Resource polymorphism in European whitefish: Analysis of fatty acid profiles provides more detailed evidence than traditional methods alone

2019

Published version, licensed CC BY-NC-ND 4.0. , available at: http://dx.doi.org/10.1371/journal.pone.0221338 Resource polymorphism—whereby ancestral generalist populations give rise to several specialised morphs along a resource gradient—is common where species colonise newly formed ecosystems. This phenomenon is particularly well documented in freshwater fish populations inhabiting postglacial lakes formed at the end of the last ice age. However, knowledge on how such differential exploitation of resources across contrasting habitats might be reflected in the biochemical compositions of diverging populations is still limited, though such patterns might be expected. Here, we aimed to assess …

0106 biological sciencesComposite ParticlesMarine and Aquatic SciencesPredationGeneralist and specialist species01 natural sciencesFood chainIsotopesvatsaFood Web StructurelakesMedicine and Health SciencesCoregonus albulaVDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497Trophic levelMultidisciplinaryEcologyfood.dishPhysicsStable IsotopesQStomachREukaryotafood web structureselkärangattomatGastrointestinal Contents6. Clean waterFood webTrophic InteractionsFreshwater FishCommunity Ecologyfreshwater fishVertebratesPhysical Sciencesresource polymorphismFreshwater fishMedicinepredationAnatomyNutritive ValueSalmonidaestomachResearch ArticleFreshwater EnvironmentsAtomsFAFood ChainSciencestable isotopesZoologyScandinavian and Nordic CountriesCoregonus lavaretusBiologyfatty acidsjärvet010603 evolutionary biologyfoodCoregonus lavaretusAnimals14. Life underwaterParticle PhysicsravintoketjutVDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920Coregonus albulatrophic interactionsEcological nicheisotoopit010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsAquatic EnvironmentsBiology and Life SciencesFeeding BehaviorBodies of WaterVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497invertebratesbiology.organism_classificationInvertebratessaalistusGastrointestinal TractLakesFishEuropean whitefishsiikaEarth SciencesDigestive SystemravintoverkotPLOS ONE
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Resource Partitioning in Food, Space and Time between Arctic Charr (Salvelinus alpinus), Brown Trout (Salmo trutta) and European Whitefish (Coregonus…

2017

Arctic charr and European whitefish are considered to be strong competitors in lakes, with the latter usually being the superior species. However, high niche plasticity and lake morphometry may suggestively facilitate resource partitioning and coexistence between charr and whitefish. Here, we explore the trophic niche utilization (diet and habitat use) of charr and whitefish co-occurring with brown trout in the deep and oligotrophic Lake Fyresvatnet, southern Norway (59˚05’N, 8˚10’E). Using CPUE, stomach contents and stable isotope analyses, a distinct resource partitioning was revealed between brown trout and the other two species. Brown trout typically occupied the littoral zone, feeding …

0106 biological sciencesComposite ParticlesTroutlcsh:MedicineMarine and Aquatic Sciences01 natural sciencesBrown troutIsotopesVDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497Salmolcsh:ScienceMultidisciplinarybiologyfood.dishEcologyEcologyNorwayPhysicsStable IsotopescoexistenceFishesPlanktonGastrointestinal ContentsTrophic InteractionsrinnakkaiseloFreshwater FishArctic charrTroutCommunity EcologyOsteichthyesVertebratesPhysical SciencesFreshwater fishEcological NichesSalmonidaeResearch ArticleFreshwater EnvironmentsAtoms010603 evolutionary biologyZooplanktonfoodCoregonus lavaretusAnimalsProfundal zoneParticle PhysicsSalmonidaeEcosystemSalvelinus010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesAquatic EnvironmentsFeeding BehaviorVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497Bodies of Waterbiology.organism_classificationInvertebratesLakesFoodEuropean whitefishEarth Sciencesta1181lcsh:Q
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Novel Thermal Technologies and Fermentation

2016

Fermentation is one of the oldest methods practiced by human beings for the transformation of some food products in order to extend shelf-life and provide novel organoleptic properties. Moreover, during fermentation a high amount of valuable compounds with important commercial benefits are produced. Therefore, there is a need to develop energy efficient and environmental-friendly sustainable processes in order to improve fermentation-related processes. Traditionally, conventional thermal treatments have been used in food fermentation; however, the organoleptic properties of the treated products can be altered. As a result, alternative approaches have been sought by food industries in order …

0106 biological sciencesComputer scienceOrganoleptic02 engineering and technology021001 nanoscience & nanotechnology01 natural sciences010608 biotechnologyFood productsThermalFermentationBiochemical engineering0210 nano-technologyFood qualityFermentation in food processingEfficient energy use
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Covariation in population trends and demography reveals targets for conservation action

2021

Wildlife conservation policies directed at common and widespread, but declining, species are difficult to design and implement effectively, as multiple environmental changes are likely to contribute to population declines. Conservation actions ultimately aim to influence demographic rates, but targeting actions towards feasible improvements in these is challenging in widespread species with ranges that encompass a wide range of environmental conditions. Across Europe, sharp declines in the abundance of migratory landbirds have driven international calls for action, but actions that could feasibly contribute to population recovery have yet to be identified. Targeted actions to improve condit…

0106 biological sciencesConservation of Natural ResourcesdemographyproductivityRange (biology)PopulationPopulation DynamicsWildlifemigration010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology010605 ornithologypopulation trendsBirdsAbundance (ecology)AnimalseducationProductivityResearch ArticlesGeneral Environmental ScienceWildlife conservationInternational calleducation.field_of_studyGeneral Immunology and MicrobiologyEcology:Samfunnsvitenskap: 200 [VDP]conservationGeneral Medicine15. Life on landEuropeGeographyAction (philosophy)1181 Ecology evolutionary biologyAnimal MigrationGeneral Agricultural and Biological SciencesDemography
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Diet composition and biomass consumption of harbour seals in Telemark and Aust-Agder, Norwegian Skagerrak

2020

To explore ecosystem dynamics and functions it is vital to obtain knowledge on predator–prey relations. Harbour seals are piscivorous predators that can come into conflict with fisheries. Recently, as the Skagerrak and Kattegat population of harbour seals has increased, claims have emerged that seals are depleting coastal cod populations. The diet of harbour seals in Norwegian Skagerrak was investigated based on otolith identification from scats. The overall seal diet included 20 different fish species/groups. The most important prey (combined index Q i ) were haddock/pollack/saithe (32.7%), genus Trisopterus (Norway pout/poor cod/bib, 12.5%), plaice (12.4%) and herring (10.0%). Plaice also…

0106 biological sciencesConsumption (economics)Biomass (ecology)010604 marine biology & hydrobiologyDiet compositionNorwegianAquatic ScienceOceanography010603 evolutionary biology01 natural scienceslanguage.human_languagePredationFisheryGeographyHarbourlanguageEcosystem dynamicsFeeding ecologycomputerVDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920Ecology Evolution Behavior and Systematicscomputer.programming_language
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Assessment of genetically modified soybean MON 87751 for food and feed uses under Regulation (EC) No 1829/2003 (application EFSA‐GMO‐NL‐2014‐121)

2018

Abstract Soybean MON 87751 was developed through Agrobacterium tumefaciens‐mediated transformation to provide protection certain specific lepidopteran pests by the expression of the Cry1A.105 and Cry2Ab2 proteins derived from Bacillus thuringiensis. The molecular characterisation data and bioinformatic analyses did not identify issues requiring assessment for food and feed safety. None of the compositional, agronomic and phenotypic differences identified between soybean MON 87751 and the conventional counterpart required further assessment. The GMO Panel did not identify safety concerns regarding the toxicity and allergenicity of the Cry1A.105 and Cry2Ab2 proteins as expressed in soybean MO…

0106 biological sciencesCry1AVeterinary (miscellaneous)Plant ScienceTP1-1185Biology01 natural sciencesMicrobiologyGenetically modified soybeansoybean (Glycinemax)MON877510404 agricultural biotechnologyEnvironmental safetyBacillus thuringiensisTX341-641Cry2Ab2Cry1A.105Animal healthbusiness.industryGMONutrition. Foods and food supplyChemical technologyfungiRegulation (EC) No 1829/2003food and beverages10504 agricultural and veterinary sciencesbiology.organism_classification040401 food scienceBiotechnologySettore AGR/02 - Agronomia E Coltivazioni ErbaceeSettore AGR/11 - Entomologia Generale E ApplicataScientific OpinionMON 87751insect resistantAnimal Science and ZoologyParasitologybusinesssoybean (Glycine max)010606 plant biology & botanyFood ScienceRegulation (EC) No 1829/2003EFSA Journal
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Scientific Opinion on application EFSA‐GMO‐BE‐2013‐117 for authorisation of genetically modified maize MON 87427 × MON 89034 × NK603 and subcombinati…

2017

Scientific opinionRequestor: Competent Authority of BelgiumQuestion number: EFSA-Q-2013-00765; In this opinion, the EFSA Panel on Genetically Modified Organisms (GMO Panel) assessed the three-event stack maize MON 87427 9 MON 89034 9 NK603 and its three subcombinations, independently of their origin. The GMO Panel has previously assessed the three single events combined to produce this three-event stack maize and did not identify safety concerns. No new data on the single events, leading to modification of the original conclusions on their safety, were identified. Based on the molecular, agronomic, phenotypic and compositional characteristics, the combination of the single maize events and …

0106 biological sciencesCry1Aherbicide tolerancemaïsVeterinary (miscellaneous)gmo[SDV]Life Sciences [q-bio]MON87427xMON89034xNK603ogmPlant Science010501 environmental sciencesmaizeCP4EPSPS01 natural sciencesMicrobiologyzea maysMON 87427 × MON 89034 × NK603Cry2Ab2CP4 EPSPS0105 earth and related environmental sciences2. Zero hungerCP4 EPSPSCry1A.105indian cornRegulation (EC) No 1829/2003105GMO;maize;herbicide tolerance;insect resistance;CP4 EPSPS;Cry1A.105;Cry2Ab2;Regulation (EC) No 1829/2003;MON 87427 x MON 89034 x NK603MON 87427 9 MON 89034 9 NK603Scientific OpinionRegulation (EC) No1829/2003Animal Science and ZoologyParasitologyinsect resistance010606 plant biology & botanyFood ScienceRegulation (EC) No 1829/2003
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Modeling of Dead Wood Potential Based on Tree Stand Data

2020

Here we present a framework for identifying areas with high dead wood potential (DWP) for conservation planning needs. The amount and quality of dead wood and dying trees are some of the most important factors for biodiversity in forests. As they are easy to recognize on site, it is widely used as a surrogate marker for ecological quality of forests. However, wall-to-wall information on dead wood is rarely available on a large scale as field data collection is expensive and local dead wood conditions change rapidly. Our method is based on the forest growth models in the Motti forest simulator, taking into account 168 combinations of tree species, site types, and vegetation zones as well as …

0106 biological sciencesDECOMPOSITION010504 meteorology & atmospheric sciencesforest simulationForest managementBiodiversityDEBRISECOLOGY010603 evolutionary biology01 natural sciencessuojelusuunnitelmatspatial conservation prioritizationsimulointilahopuutconservation planningMETAANALYSISbiodiversity0105 earth and related environmental sciencesforests4112 ForestrySPECIES RICHNESSmetsänkäsittelyTaigacoarse woody debrisforestryNORWAY SPRUCELand-use planningForestryVegetationlcsh:QK900-98915. Life on landbiodiversiteettimetsiensuojeluTree standlcsh:Plant ecologyEnvironmental scienceGROWTHBIODIVERSITYCoarse woody debrisScale (map)land-use planning
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